flake: update dependencies

Signed-off-by: Jonathan Coates <jonathan.coates@oxionics.com>

README.md

@@ -4,65 +4,107 @@ ARTIQ on Zynq
 How to use
 ----------
 
-1. Install the ARTIQ version that corresponds to the artiq-zynq version you are targeting.
-2. To obtain firmware binaries, select the latest successful build on [Hydra](https://nixbld.m-labs.hk/) for the targeted artiq-zynq version, or use AFWS. If using Hydra, search for the job named ``<board>-<variant>-sd`` (for example: ``zc706-nist_clock-sd`` or ``zc706-nist_qc2-sd``).
-3. Place the ``boot.bin`` file, obtained from Hydra's "binary distribution" download link or from AFWS, at the root of a FAT-formatted SD card.
-4. Optionally, create a ``config.txt`` configuration file at the root of the SD card containing ``key=value`` pairs on each line. Use the ``ip``, ``ip6`` and ``mac`` keys to respectively set the IPv4, IPv6 and MAC address of the board. Configuring an IPv6 address is entirely optional. If these keys are not found, the firmware will use default values that may or may not be compatible with your network.
-5. Insert the SD card into the board and set up the board to boot from the SD card. For the ZC706, this is achieved by placing the large DIP switch SW11 in the 00110 position.
-6. Power up the board. After the firmware starts successfully, it should respond to ping at its IP addresses, and boot messages can be observed from its UART at 115200bps.
-7. Create and use an ARTIQ device database as usual, but set ``"target": "cortexa9"`` in the arguments of the core device.
+1. [Install ARTIQ](https://m-labs.hk/artiq/manual/installing.html). Get the corresponding version to the ``artiq-zynq`` version you are targeting.
+2. To obtain firmware binaries, use AFWS or build your own; see [the ARTIQ manual](https://m-labs.hk/artiq/manual/building_developing.html) for detailed instructions or skip to "Development" below. ZC706 variants only can also be downloaded from latest successful build on [Hydra](https://nixbld.m-labs.hk/).
+3. Place ``boot.bin`` file at the root ``/`` of a FAT-formatted SD card.
+4. Optionally, create a ``config.txt`` configuration file containing ``key=value`` pairs on each line and place it at the root of the SD card. See below for valid keys. The ``ip``, ``ip6`` and ``mac`` keys can be used to set networking information. If these keys are not found, the firmware will use default values which may or may not be compatible with your network.
+5. Insert the SD card into the board and set the board to boot from the SD card. For ZC706, this is achieved by placing the large DIP switch SW11 into the 00110 position. On Kasli-SoC, place the BOOT MODE switches to SD.
+6. Power up the board. After successful boot the firmware should respond to ping at its IP addresses. Boot output can be observed from UART at 115200bps 8-N-1.
+7. Create and use an ARTIQ device database as usual.
 
 Configuration
 -------------
 
-Configuring the device is done using the ``config.txt`` text file at the root of the SD card, plus the contents of the ``config`` folder. When searching for a configuration key, the firmware first looks for a file named ``/config/[key].bin`` and, if it exists, returns the contents of that file. If not, it looks into ``/config.txt``, which contains a list of ``key=value`` pairs, one per line. The ``config`` folder allows configuration values that consist in binary data, such as the startup kernel.
+Configuring the device is done using the ``config.txt`` text file at the root of the SD card plus optionally a ``config`` folder. When searching for a configuration key, the firmware first looks for a file named ``/config/[key].bin`` and, if it exists, returns the contents of that file. If not, it looks into ``/config.txt``, which should contain a list of ``key=value`` pairs, one per line. ``config.txt`` should be used for most keys but the ``config`` folder allows for setting configuration values which consist of binary data, such as the startup kernel.
 
-The following configuration keys are available:
+The following configuration keys are available among others:
 
 - ``mac``: Ethernet MAC address.
 - ``ip``: IPv4 address.
 - ``ip6``: IPv6 address.
-- ``startup``: startup kernel in ELF format (as produced by ``artiq_compile``).
+- ``idle_kernel``: idle kernel in ELF format (as produced by ``artiq_compile``).
+- ``startup_kernel``: startup kernel in ELF format (as produced by ``artiq_compile``).
 - ``rtio_clock``: source of RTIO clock; valid values are ``ext0_bypass`` and ``int_125``.
-- ``boot``: SD card "boot.bin" file, for replacing the boot firmware/gateware. Write only.
 
-Configurations can be read/written/removed via ``artiq_coremgmt``. Config erase is
-not implemented as it seems not very useful.
+See [ARTIQ manual](https://m-labs.hk/artiq/manual-beta/core_device.html#configuration-storage) for full list. Configurations can be read/written/removed with ``artiq_coremgmt``. Config erase is not implemented, as it isn't particularly useful.
+
+For convenience, the ``boot`` key can be used with ``artiq_coremgmt`` and a ``boot.bin`` file to replace firmware/gateware in a running system. This key is read-only. When loading ``boot.bin`` onto the SD card directly, place it at the root and not in the ``config`` folder.
 
 Development instructions
 ------------------------
 
-ARTIQ on Zynq is packaged using the [Nix](https://nixos.org) Flakes system. Install Nix 2.8+ and enable flakes by adding ``experimental-features = nix-command flakes`` to ``nix.conf`` (e.g. ``~/.config/nix/nix.conf``).
+ARTIQ on Zynq is packaged using [Nix](https://nixos.org) Flakes. Install Nix 2.8+ and enable flakes by adding ``experimental-features = nix-command flakes`` to ``nix.conf`` (e.g. ``~/.config/nix/nix.conf``).
 
-Pure build with Nix and execution on a remote JTAG server:
+**Pure build with Nix:**
 
 ```shell
-nix build .#zc706-nist_clock-jtag  # or zc706-nist_qc2-jtag or zc706-nist_clock_satellite-jtag etc.
-./remote_run.sh
+nix build .#zc706-nist_clock-jtag  # or zc706-nist_qc2-jtag or zc706-nist_clock-sd or etc
 ```
 
-Impure incremental build and execution on a remote JTAG server:
+Run ``nix flake show`` to see all valid build targets. Targets suffixed with ``-jtag`` produce separate firmware and gateware files, intended for use in booting via JTAG server/Ethernet, e.g. ``./remote_run.sh -i`` with a remote JTAG server. Targets suffixed with ``-sd`` will produce ``boot.bin`` file suitable for SD card boot. ``-firmware`` and ``-gateware`` respectively build firmware and gateware only.
+
+The Kasli-SoC target requires a system description file as input. See ARTIQ manual for exact instructions or use incremental build.
+
+**Impure incremental build:**
+
+For boards with fixed variants, i.e. ZC706, etc. :
 
 ```shell
 nix develop
 cd src
-gateware/zc706.py -g ../build/gateware -V <variant> # build gateware
-make GWARGS="-V <variant>" <runtime/satman>    # build firmware
-cd ..
-./remote_run.sh -i
+gateware/<board>.py -g ../build/gateware -V <variant> # gateware
+make GWARGS="-V <variant>" <runtime/satman>    # firmware
+```
+
+For boards with system descriptions, i.e. Kasli-SoC, etc. :
+
+```shell
+nix develop
+cd src
+gateware/<board>.py -g ../build/gateware <description.json> # gateware
+make TARGET=<board> GWARGS="path/to/description.json" <runtime/satman> # firmware
+```
+
+``szl.elf`` can be obtained with:
+
+```shell
+nix build git+https://git.m-labs.hk/m-labs/zynq-rs#<board>-szl
+```
+
+To generate ``boot.bin`` use ``mkbootimage``, e.g.:
+
+```shell
+echo "the_ROM_image:
+    {
+        [bootloader]result/szl.elf
+        gateware/top.bit
+        firmware/armv7-none-eabihf/release/<runtime/satman>
+    }
+    EOF" >> boot.bif
+mkbootimage boot.bif boot.bin
 ```
 
 Notes:
 
 - The impure build process is also compatible with non-Nix systems.
-- When calling make, you need to specify both the variant and firmware type.
 - Firmware type must be either ``runtime`` for DRTIO-less or DRTIO master variants, or ``satman`` for DRTIO satellite.
-- If the board is connected to the local machine, use the ``local_run.sh`` script.
+- If the board is connected to the local machine by JTAG, use the ``local_run.sh`` script.
+- A known Xilinx hardware bug prevents repeatedly loading the bootloader over JTAG without a POR reset. If booting over JTAG, install a jumper on ``PS_POR_B`` and use the POR reset script [here](https://git.m-labs.hk/M-Labs/zynq-rs/src/branch/master/kasli_soc_por.py).
+
+Pre-Commit Hooks
+----------------
+
+You are strongly recommended to use the provided pre-commit hooks to automatically reformat files and check for non-optimal Rust/C/C++ practices. Run `pre-commit install` to install the hook and `pre-commit` will automatically run `cargo fmt`, `cargo clippy`, and `clang-format` for you.
+
+Several things to note:
+
+- If `cargo fmt`, `cargo clippy`, or `clang-format` returns an error, the pre-commit hook will fail. You should fix all errors before trying to commit again.
+- If `cargo fmt` or `clang-format` reformats some files, the pre-commit hook will also fail. You should review the changes and, if satisfied, try to commit again.
 
 License
 -------
 
-Copyright (C) 2019-2023 M-Labs Limited.
+Copyright (C) 2019-2024 M-Labs Limited.
 
 ARTIQ is free software: you can redistribute it and/or modify
 it under the terms of the GNU Lesser General Public License as published by

examples/ebaz4205/device_db.py

@@ -0,0 +1,78 @@
+core_addr = "192.168.1.57"
+
+device_db = {
+    "core": {
+        "type": "local",
+        "module": "artiq.coredevice.core",
+        "class": "Core",
+        "arguments": {
+            "host": core_addr,
+            "ref_period": 1e-9,
+            "target": "cortexa9",
+        },
+    },
+    "core_log": {
+        "type": "controller",
+        "host": "::1",
+        "port": 1068,
+        "command": "aqctl_corelog -p {port} --bind {bind} " + core_addr,
+    },
+    "core_moninj": {
+        "type": "controller",
+        "host": "::1",
+        "port_proxy": 1383,
+        "port": 1384,
+        "command": "aqctl_moninj_proxy --port-proxy {port_proxy} --port-control {port} --bind {bind} "
+        + core_addr,
+    },
+    "core_analyzer": {
+        "type": "controller",
+        "host": "::1",
+        "port_proxy": 1385,
+        "port": 1386,
+        "command": "aqctl_coreanalyzer_proxy --port-proxy {port_proxy} --port-control {port} --bind {bind} "
+        + core_addr,
+    },
+    "core_cache": {
+        "type": "local",
+        "module": "artiq.coredevice.cache",
+        "class": "CoreCache",
+    },
+    "core_dma": {"type": "local", "module": "artiq.coredevice.dma", "class": "CoreDMA"},
+    "led0": {
+        "type": "local",
+        "module": "artiq.coredevice.ttl",
+        "class": "TTLOut",
+        "arguments": {"channel": 0},
+    },
+    "led1": {
+        "type": "local",
+        "module": "artiq.coredevice.ttl",
+        "class": "TTLOut",
+        "arguments": {"channel": 1},
+    },
+}
+
+# TTLs starting at RTIO channel 2, ending at RTIO channel 15
+for i in range(2, 16):
+    device_db["ttl" + str(i)] = {
+        "type": "local",
+        "module": "artiq.coredevice.ttl",
+        "class": "TTLInOut",
+        "arguments": {"channel": i},
+    }
+
+device_db.update(
+    spi0={
+        "type": "local",
+        "module": "artiq.coredevice.spi2",
+        "class": "SPIMaster",
+        "arguments": {"channel": 16},
+    },
+    dds0={
+        "type": "local",
+        "module": "artiq.coredevice.ad9834",
+        "class": "AD9834",
+        "arguments": {"spi_device": "spi0"},
+    },
+)

flake.lock

@@ -3,19 +3,19 @@
     "artiq": {
       "inputs": {
         "artiq-comtools": "artiq-comtools",
-        "mozilla-overlay": "mozilla-overlay",
         "nixpkgs": "nixpkgs",
+        "rust-overlay": "rust-overlay",
         "sipyco": "sipyco",
         "src-migen": "src-migen",
         "src-misoc": "src-misoc",
         "src-pythonparser": "src-pythonparser"
       },
       "locked": {
-        "lastModified": 1697537883,
-        "narHash": "sha256-GfadmYHFkczltX+rPf08YpAHjYa/31ZmmVD578BcFow=",
+        "lastModified": 1732066716,
+        "narHash": "sha256-krjvt9+RccnAxSEZcFhRpjA2S3CoqE4MSa1JUg421b4=",
         "ref": "refs/heads/master",
-        "rev": "b168f0bb4be1697ff100475c20ee304dcc31fcc2",
-        "revCount": 8573,
+        "rev": "270a417a28b516d36983779a1adb6d33a3c55a4a",
+        "revCount": 9102,
         "type": "git",
         "url": "https://github.com/m-labs/artiq.git"
       },
@@ -37,11 +37,11 @@
         ]
       },
       "locked": {
-        "lastModified": 1693473687,
-        "narHash": "sha256-BdLddCWbvoEyakcGwhph9b5dIU1iA0hCQV7KYgU8nos=",
+        "lastModified": 1720768567,
+        "narHash": "sha256-3VoK7o5MtHtbHLrc6Pv+eQWFtaz5Gd/YWyV5TD3c5Ss=",
         "owner": "m-labs",
         "repo": "artiq-comtools",
-        "rev": "f522ef3dbc65961f17b2d3d41e927409d970fd79",
+        "rev": "f93570d8f2ed5a3cfb3e1c16ab00f2540551e994",
         "type": "github"
       },
       "original": {
@@ -55,11 +55,11 @@
         "systems": "systems"
       },
       "locked": {
-        "lastModified": 1692799911,
-        "narHash": "sha256-3eihraek4qL744EvQXsK1Ha6C3CR7nnT8X2qWap4RNk=",
+        "lastModified": 1710146030,
+        "narHash": "sha256-SZ5L6eA7HJ/nmkzGG7/ISclqe6oZdOZTNoesiInkXPQ=",
         "owner": "numtide",
         "repo": "flake-utils",
-        "rev": "f9e7cf818399d17d347f847525c5a5a8032e4e44",
+        "rev": "b1d9ab70662946ef0850d488da1c9019f3a9752a",
         "type": "github"
       },
       "original": {
@@ -68,66 +68,18 @@
         "type": "github"
       }
     },
-    "mozilla-overlay": {
-      "flake": false,
-      "locked": {
-        "lastModified": 1695805681,
-        "narHash": "sha256-1ElPLD8eFfnuIk0G52HGGpRtQZ4QPCjChRlEOfkZ5ro=",
-        "owner": "mozilla",
-        "repo": "nixpkgs-mozilla",
-        "rev": "6eabade97bc28d707a8b9d82ad13ef143836736e",
-        "type": "github"
-      },
-      "original": {
-        "owner": "mozilla",
-        "repo": "nixpkgs-mozilla",
-        "type": "github"
-      }
-    },
-    "mozilla-overlay_2": {
-      "flake": false,
-      "locked": {
-        "lastModified": 1695805681,
-        "narHash": "sha256-1ElPLD8eFfnuIk0G52HGGpRtQZ4QPCjChRlEOfkZ5ro=",
-        "owner": "mozilla",
-        "repo": "nixpkgs-mozilla",
-        "rev": "6eabade97bc28d707a8b9d82ad13ef143836736e",
-        "type": "github"
-      },
-      "original": {
-        "owner": "mozilla",
-        "repo": "nixpkgs-mozilla",
-        "type": "github"
-      }
-    },
-    "mozilla-overlay_3": {
-      "flake": false,
-      "locked": {
-        "lastModified": 1695805681,
-        "narHash": "sha256-1ElPLD8eFfnuIk0G52HGGpRtQZ4QPCjChRlEOfkZ5ro=",
-        "owner": "mozilla",
-        "repo": "nixpkgs-mozilla",
-        "rev": "6eabade97bc28d707a8b9d82ad13ef143836736e",
-        "type": "github"
-      },
-      "original": {
-        "owner": "mozilla",
-        "repo": "nixpkgs-mozilla",
-        "type": "github"
-      }
-    },
     "nixpkgs": {
       "locked": {
-        "lastModified": 1697226376,
-        "narHash": "sha256-cumLLb1QOUtWieUnLGqo+ylNt3+fU8Lcv5Zl+tYbRUE=",
+        "lastModified": 1731319897,
+        "narHash": "sha256-PbABj4tnbWFMfBp6OcUK5iGy1QY+/Z96ZcLpooIbuEI=",
         "owner": "NixOS",
         "repo": "nixpkgs",
-        "rev": "898cb2064b6e98b8c5499f37e81adbdf2925f7c5",
+        "rev": "dc460ec76cbff0e66e269457d7b728432263166c",
         "type": "github"
       },
       "original": {
         "owner": "NixOS",
-        "ref": "nixos-23.05",
+        "ref": "nixos-unstable",
         "repo": "nixpkgs",
         "type": "github"
       }
@@ -135,10 +87,53 @@
     "root": {
       "inputs": {
         "artiq": "artiq",
-        "mozilla-overlay": "mozilla-overlay_2",
         "zynq-rs": "zynq-rs"
       }
     },
+    "rust-overlay": {
+      "inputs": {
+        "nixpkgs": [
+          "artiq",
+          "nixpkgs"
+        ]
+      },
+      "locked": {
+        "lastModified": 1719454714,
+        "narHash": "sha256-MojqG0lyUINkEk0b3kM2drsU5vyaF8DFZe/FAlZVOGs=",
+        "owner": "oxalica",
+        "repo": "rust-overlay",
+        "rev": "d1c527659cf076ecc4b96a91c702d080b213801e",
+        "type": "github"
+      },
+      "original": {
+        "owner": "oxalica",
+        "ref": "snapshot/2024-08-01",
+        "repo": "rust-overlay",
+        "type": "github"
+      }
+    },
+    "rust-overlay_2": {
+      "inputs": {
+        "nixpkgs": [
+          "zynq-rs",
+          "nixpkgs"
+        ]
+      },
+      "locked": {
+        "lastModified": 1719454714,
+        "narHash": "sha256-MojqG0lyUINkEk0b3kM2drsU5vyaF8DFZe/FAlZVOGs=",
+        "owner": "oxalica",
+        "repo": "rust-overlay",
+        "rev": "d1c527659cf076ecc4b96a91c702d080b213801e",
+        "type": "github"
+      },
+      "original": {
+        "owner": "oxalica",
+        "ref": "snapshot/2024-08-01",
+        "repo": "rust-overlay",
+        "type": "github"
+      }
+    },
     "sipyco": {
       "inputs": {
         "nixpkgs": [
@@ -147,11 +142,11 @@
         ]
       },
       "locked": {
-        "lastModified": 1697528004,
-        "narHash": "sha256-FFa2MbhAJEjwY58uOs0swvgymfjubHyWba6Q0X6CbB0=",
+        "lastModified": 1728371104,
+        "narHash": "sha256-PPnAyDedUQ7Og/Cby9x5OT9wMkNGTP8GS53V6N/dk4w=",
         "owner": "m-labs",
         "repo": "sipyco",
-        "rev": "c0a7ed350ccfb85474217057fc47b3f258ca8d99",
+        "rev": "094a6cd63ffa980ef63698920170e50dc9ba77fd",
         "type": "github"
       },
       "original": {
@@ -163,11 +158,11 @@
     "src-migen": {
       "flake": false,
       "locked": {
-        "lastModified": 1697013661,
-        "narHash": "sha256-qNCqgWyE4vTDmyjE2XMJqW1djuBxT25A36AzQfZqluU=",
+        "lastModified": 1727677091,
+        "narHash": "sha256-Zg3SQnTwMM/VkOGKogbPyuCC2NhLy8HB2SPEUWWNgCU=",
         "owner": "m-labs",
         "repo": "migen",
-        "rev": "aadc19df93b7aa9ca761aaebbb98a11e0cf2d7c7",
+        "rev": "c19ae9f8ae162ffe2d310a92bfce53ac2a821bc8",
         "type": "github"
       },
       "original": {
@@ -179,11 +174,11 @@
     "src-misoc": {
       "flake": false,
       "locked": {
-        "lastModified": 1693709836,
-        "narHash": "sha256-YiCk05RYLzZu1CYkQ2r7XtjwVEqkUGTQn388uOls9tI=",
+        "lastModified": 1729234629,
+        "narHash": "sha256-TLsTCXV5AC2xh+bS7EhBVBKqdqIU3eKrnlWcFF9LtAM=",
         "ref": "refs/heads/master",
-        "rev": "58dc4ee60d165ce9145cf3d904241fc154b6407f",
-        "revCount": 2448,
+        "rev": "6085a312bca26adeca6584e37d08c8ba2e1d6e38",
+        "revCount": 2460,
         "submodules": true,
         "type": "git",
         "url": "https://github.com/m-labs/misoc.git"
@@ -227,18 +222,18 @@
     },
     "zynq-rs": {
       "inputs": {
-        "mozilla-overlay": "mozilla-overlay_3",
         "nixpkgs": [
           "artiq",
           "nixpkgs"
-        ]
+        ],
+        "rust-overlay": "rust-overlay_2"
       },
       "locked": {
-        "lastModified": 1697795161,
-        "narHash": "sha256-p89w9eoFJ2VFTDZ5Mrv5vsH0E1Ko9z1C6Ett281hCHg=",
+        "lastModified": 1731749494,
+        "narHash": "sha256-WGigAhvVCGN5YZ1dHPyvoqAh47W1Gtph036O1aKFlLE=",
         "ref": "refs/heads/master",
-        "rev": "be672ab662d8134ee11412a651864824f6483d4a",
-        "revCount": 630,
+        "rev": "12975de2e110d7948bf47b768559f727d0abc8fc",
+        "revCount": 655,
         "type": "git",
         "url": "https://git.m-labs.hk/m-labs/zynq-rs"
       },

flake.nix

@@ -2,26 +2,26 @@
   description = "ARTIQ port to the Zynq-7000 platform";
 
   inputs.artiq.url = git+https://github.com/m-labs/artiq.git;
-  inputs.mozilla-overlay = { url = github:mozilla/nixpkgs-mozilla; flake = false; };
   inputs.zynq-rs.url = git+https://git.m-labs.hk/m-labs/zynq-rs;
   inputs.zynq-rs.inputs.nixpkgs.follows = "artiq/nixpkgs";
 
-  outputs = { self, mozilla-overlay, zynq-rs, artiq }:
+  outputs = { self, zynq-rs, artiq }:
   let
-    pkgs = import artiq.inputs.nixpkgs { system = "x86_64-linux"; overlays = [ (import mozilla-overlay) ]; };
+    pkgs = import artiq.inputs.nixpkgs { system = "x86_64-linux"; overlays = [ (import zynq-rs.inputs.rust-overlay) ]; };
     zynqpkgs = zynq-rs.packages.x86_64-linux;
     artiqpkgs = artiq.packages.x86_64-linux;
+    llvmPackages_11 = zynq-rs.llvmPackages_11;
 
     rust = zynq-rs.rust;
     rustPlatform = zynq-rs.rustPlatform;
 
     fastnumbers = pkgs.python3Packages.buildPythonPackage rec {
       pname = "fastnumbers";
-      version = "2.2.1";
+      version = "5.1.0";
 
       src = pkgs.python3Packages.fetchPypi {
         inherit pname version;
-        sha256 = "0j15i54p7nri6hkzn1wal9pxri4pgql01wgjccig6ar0v5jjbvsy";
+        sha256 = "sha256-4JLTP4uVwxcaL7NOV57+DFSwKQ3X+W/6onYkN2AdkKc=";
       };
     };
 
@@ -74,10 +74,11 @@
 
       propagatedBuildInputs = with pkgs.python3Packages; [ setuptools click numpy toolz jinja2 ramda artiqpkgs.migen artiqpkgs.misoc ];
 
-      checkInputs = with pkgs.python3Packages; [ pytest-runner pytestCheckHook pytest-timeout ];
+      checkInputs = with pkgs.python3Packages; [ pytestCheckHook pytest-timeout ];
 
       # migen/misoc version checks are broken with pyproject for some reason
       postPatch = ''
+        sed -i "1,4d" pyproject.toml
         substituteInPlace pyproject.toml \
           --replace '"migen@git+https://github.com/m-labs/migen",' ""
         substituteInPlace pyproject.toml \
@@ -112,7 +113,7 @@
       "nist_clock_satellite" "nist_qc2_satellite" "acpki_nist_clock_satellite" "acpki_nist_qc2_satellite" 
       "nist_clock_satellite_100mhz" "nist_qc2_satellite_100mhz" "acpki_nist_clock_satellite_100mhz" "acpki_nist_qc2_satellite_100mhz"
     ];
-    build = { target, variant, json ? null }: let
+    board-package-set = { target, variant, json ? null }: let
       szl = zynqpkgs."${target}-szl";
       fsbl = zynqpkgs."${target}-fsbl";
       fwtype = if builtins.elem variant sat_variants then "satman" else "runtime";
@@ -122,18 +123,22 @@
         src = ./src;
         cargoLock = { 
           lockFile = src/Cargo.lock;
+          outputHashes = {
+              "tar-no-std-0.1.8" = "sha256-xm17108v4smXOqxdLvHl9CxTCJslmeogjm4Y87IXFuM=";
+              "nalgebra-0.32.6" = "sha256-L/YudkVOtfGYoNQKBD7LMk/sMYgRDzPDdpGL5rO7G2I=";
+            };
         };
 
         nativeBuildInputs = [
           pkgs.gnumake
           (pkgs.python3.withPackages(ps: [ ps.jsonschema artiqpkgs.migen migen-axi artiqpkgs.misoc artiqpkgs.artiq ]))
           zynqpkgs.cargo-xbuild
-          pkgs.llvmPackages_9.llvm
-          pkgs.llvmPackages_9.clang-unwrapped
+          llvmPackages_11.llvm
+          llvmPackages_11.clang-unwrapped
         ];
         buildPhase = ''
           export XARGO_RUST_SRC="${rust}/lib/rustlib/src/rust/library"
-          export CLANG_EXTRA_INCLUDE_DIR="${pkgs.llvmPackages_9.clang-unwrapped.lib}/lib/clang/9.0.1/include"
+          export CLANG_EXTRA_INCLUDE_DIR="${llvmPackages_11.clang-unwrapped.lib}/lib/clang/11.1.0/include"
           export CARGO_HOME=$(mktemp -d cargo-home.XXX)
           export ZYNQ_RS=${zynq-rs}
           make TARGET=${target} GWARGS="${if json == null then "-V ${variant}" else json}" ${fwtype}
@@ -149,6 +154,7 @@
 
         doCheck = false;
         dontFixup = true;
+        auditable = false;
       };
       gateware = pkgs.runCommand "${target}-${variant}-gateware"
         {
@@ -268,7 +274,7 @@
     };
 
     # for hitl-tests
-    zc706-nist_qc2 = (build { target = "zc706"; variant = "nist_qc2"; });
+    zc706-nist_qc2 = (board-package-set { target = "zc706"; variant = "nist_qc2"; });
     zc706-hitl-tests = pkgs.stdenv.mkDerivation {
       name = "zc706-hitl-tests";
 
@@ -335,29 +341,30 @@
       {
         inherit fastnumbers artiq-netboot ramda migen-axi binutils-arm;
       } //
-      (build { target = "zc706"; variant = "nist_clock"; }) //
-      (build { target = "zc706"; variant = "nist_clock_master"; }) //
-      (build { target = "zc706"; variant = "nist_clock_master_100mhz"; }) //
-      (build { target = "zc706"; variant = "nist_clock_satellite"; }) //
-      (build { target = "zc706"; variant = "nist_clock_satellite_100mhz"; }) //
-      (build { target = "zc706"; variant = "nist_qc2"; }) //
-      (build { target = "zc706"; variant = "nist_qc2_master"; }) //
-      (build { target = "zc706"; variant = "nist_qc2_master_100mhz"; }) //
-      (build { target = "zc706"; variant = "nist_qc2_satellite"; }) //
-      (build { target = "zc706"; variant = "nist_qc2_satellite_100mhz"; }) //
-      (build { target = "zc706"; variant = "acpki_nist_clock"; }) //
-      (build { target = "zc706"; variant = "acpki_nist_clock_master"; }) //
-      (build { target = "zc706"; variant = "acpki_nist_clock_master_100mhz"; }) //
-      (build { target = "zc706"; variant = "acpki_nist_clock_satellite"; }) //
-      (build { target = "zc706"; variant = "acpki_nist_clock_satellite_100mhz"; }) //
-      (build { target = "zc706"; variant = "acpki_nist_qc2"; }) //
-      (build { target = "zc706"; variant = "acpki_nist_qc2_master"; }) //
-      (build { target = "zc706"; variant = "acpki_nist_qc2_master_100mhz"; }) //
-      (build { target = "zc706"; variant = "acpki_nist_qc2_satellite"; }) //
-      (build { target = "zc706"; variant = "acpki_nist_qc2_satellite_100mhz"; }) //
-      (build { target = "kasli_soc"; variant = "demo"; json = ./demo.json; }) //
-      (build { target = "kasli_soc"; variant = "master"; json = ./kasli-soc-master.json; }) //
-      (build { target = "kasli_soc"; variant = "satellite"; json = ./kasli-soc-satellite.json; });
+      (board-package-set { target = "zc706"; variant = "nist_clock"; }) //
+      (board-package-set { target = "zc706"; variant = "nist_clock_master"; }) //
+      (board-package-set { target = "zc706"; variant = "nist_clock_master_100mhz"; }) //
+      (board-package-set { target = "zc706"; variant = "nist_clock_satellite"; }) //
+      (board-package-set { target = "zc706"; variant = "nist_clock_satellite_100mhz"; }) //
+      (board-package-set { target = "zc706"; variant = "nist_qc2"; }) //
+      (board-package-set { target = "zc706"; variant = "nist_qc2_master"; }) //
+      (board-package-set { target = "zc706"; variant = "nist_qc2_master_100mhz"; }) //
+      (board-package-set { target = "zc706"; variant = "nist_qc2_satellite"; }) //
+      (board-package-set { target = "zc706"; variant = "nist_qc2_satellite_100mhz"; }) //
+      (board-package-set { target = "zc706"; variant = "acpki_nist_clock"; }) //
+      (board-package-set { target = "zc706"; variant = "acpki_nist_clock_master"; }) //
+      (board-package-set { target = "zc706"; variant = "acpki_nist_clock_master_100mhz"; }) //
+      (board-package-set { target = "zc706"; variant = "acpki_nist_clock_satellite"; }) //
+      (board-package-set { target = "zc706"; variant = "acpki_nist_clock_satellite_100mhz"; }) //
+      (board-package-set { target = "zc706"; variant = "acpki_nist_qc2"; }) //
+      (board-package-set { target = "zc706"; variant = "acpki_nist_qc2_master"; }) //
+      (board-package-set { target = "zc706"; variant = "acpki_nist_qc2_master_100mhz"; }) //
+      (board-package-set { target = "zc706"; variant = "acpki_nist_qc2_satellite"; }) //
+      (board-package-set { target = "zc706"; variant = "acpki_nist_qc2_satellite_100mhz"; }) //
+      (board-package-set { target = "kasli_soc"; variant = "demo"; json = ./demo.json; }) //
+      (board-package-set { target = "kasli_soc"; variant = "master"; json = ./kasli-soc-master.json; }) //
+      (board-package-set { target = "kasli_soc"; variant = "satellite"; json = ./kasli-soc-satellite.json; }) //
+      (board-package-set { target = "ebaz4205"; variant = "base"; });
 
     hydraJobs = packages.x86_64-linux // { inherit zc706-hitl-tests; inherit gateware-sim; inherit fmt-check; };
 
@@ -365,8 +372,8 @@
       name = "artiq-zynq-dev-shell";
       buildInputs = with pkgs; [
         rust
-        llvmPackages_9.llvm
-        llvmPackages_9.clang-unwrapped
+        llvmPackages_11.llvm
+        llvmPackages_11.clang-unwrapped
         gnumake
         cacert
         zynqpkgs.cargo-xbuild
@@ -377,15 +384,16 @@
         artiqpkgs.artiq
         artiqpkgs.vivado
         binutils-arm
+        pre-commit
       ];
       XARGO_RUST_SRC = "${rust}/lib/rustlib/src/rust/library";
-      CLANG_EXTRA_INCLUDE_DIR = "${pkgs.llvmPackages_9.clang-unwrapped.lib}/lib/clang/9.0.1/include";
+      CLANG_EXTRA_INCLUDE_DIR = "${llvmPackages_11.clang-unwrapped.lib}/lib/clang/11.1.0/include";
       ZYNQ_RS = "${zynq-rs}";
       OPENOCD_ZYNQ = "${zynq-rs}/openocd";
       SZL = "${zynqpkgs.szl}";
     };
 
-    makeArtiqZynqPackage = build;
+    makeArtiqZynqPackage = board-package-set;
 
   };
 }

src/.clang-format

@@ -0,0 +1,32 @@
+BasedOnStyle: LLVM
+
+Language: Cpp
+Standard: Cpp11
+
+AccessModifierOffset: -1
+AlignEscapedNewlines: Left
+AlwaysBreakAfterReturnType: None
+AlwaysBreakTemplateDeclarations: Yes
+AllowAllParametersOfDeclarationOnNextLine: false
+AllowShortFunctionsOnASingleLine: Inline
+BinPackParameters: false
+BreakBeforeBinaryOperators: NonAssignment
+BreakBeforeTernaryOperators: true
+BreakConstructorInitializers: AfterColon
+BreakInheritanceList: AfterColon
+ColumnLimit: 120
+ConstructorInitializerAllOnOneLineOrOnePerLine: true
+ContinuationIndentWidth: 4
+DerivePointerAlignment: false
+IndentCaseLabels: true
+IndentPPDirectives: None
+IndentWidth: 4
+MaxEmptyLinesToKeep: 1
+PointerAlignment: Left
+ReflowComments: true
+SortIncludes: false
+SortUsingDeclarations: true
+SpaceAfterTemplateKeyword: false
+SpacesBeforeTrailingComments: 2
+TabWidth: 4
+UseTab: Never

src/.clippy.toml

@@ -0,0 +1 @@
+doc-valid-idents = ["CPython", "NumPy", ".."]

src/.pre-commit-config.yaml

@@ -0,0 +1,32 @@
+# See https://pre-commit.com for more information
+# See https://pre-commit.com/hooks.html for more hooks
+
+default_stages: [commit]
+
+repos:
+  - repo: local
+    hooks:
+      - id: cargo-fmt
+        name: artiq-zynq cargo format
+        entry: nix
+        language: system
+        types: [file, rust]
+        pass_filenames: false
+        description: Runs cargo fmt on the codebase.
+        args: [develop, -c, cargo, fmt, --manifest-path, src/Cargo.toml, --all]
+      - id: cargo-clippy
+        name: artiq-zynq cargo clippy
+        entry: nix
+        language: system
+        types: [file, rust]
+        pass_filenames: false
+        description: Runs cargo clippy on the codebase.
+        args: [develop, -c, cargo, clippy, --manifest-path, src/Cargo.toml, --tests]
+  - repo: https://github.com/pre-commit/mirrors-clang-format
+    rev: v19.1.0
+    hooks:
+      - id: clang-format
+        name: artiq-zynq clang-format
+        description: Runs clang-format on the codebase.
+        files: \.(cpp|h|hpp|c)$
+        args: [-style=file, -fallback-style=none, -assume-filename=src/.clang-format]

src/Cargo.lock

@@ -2,6 +2,21 @@
 # It is not intended for manual editing.
 version = 3
 
+[[package]]
+name = "approx"
+version = "0.5.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "cab112f0a86d568ea0e627cc1d6be74a1e9cd55214684db5561995f6dad897c6"
+dependencies = [
+ "num-traits",
+]
+
+[[package]]
+name = "arrayvec"
+version = "0.7.4"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "96d30a06541fbafbc7f82ed10c06164cfbd2c401138f6addd8404629c4b16711"
+
 [[package]]
 name = "async-recursion"
 version = "0.3.2"
@@ -240,6 +255,7 @@ dependencies = [
  "libsupport_zynq",
  "log",
  "log_buffer",
+ "nalgebra",
  "nb 0.1.3",
  "unwind",
  "vcell",
@@ -376,6 +392,19 @@ version = "0.7.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "c75de51135344a4f8ed3cfe2720dc27736f7711989703a0b43aadf3753c55577"
 
+[[package]]
+name = "nalgebra"
+version = "0.32.6"
+source = "git+https://git.m-labs.hk/M-Labs/nalgebra.git?rev=dd00f9b#dd00f9b46046e0b931d1b470166db02fd29591be"
+dependencies = [
+ "approx",
+ "num-complex",
+ "num-rational",
+ "num-traits",
+ "simba",
+ "typenum",
+]
+
 [[package]]
 name = "nb"
 version = "0.1.3"
@@ -391,6 +420,15 @@ version = "1.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "546c37ac5d9e56f55e73b677106873d9d9f5190605e41a856503623648488cae"
 
+[[package]]
+name = "num-complex"
+version = "0.4.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "26873667bbbb7c5182d4a37c1add32cdf09f841af72da53318fdb81543c15085"
+dependencies = [
+ "num-traits",
+]
+
 [[package]]
 name = "num-derive"
 version = "0.3.3"
@@ -402,6 +440,26 @@ dependencies = [
  "syn",
 ]
 
+[[package]]
+name = "num-integer"
+version = "0.1.46"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "7969661fd2958a5cb096e56c8e1ad0444ac2bbcd0061bd28660485a44879858f"
+dependencies = [
+ "num-traits",
+]
+
+[[package]]
+name = "num-rational"
+version = "0.4.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "d41702bd167c2df5520b384281bc111a4b5efcf7fbc4c9c222c815b07e0a6a6a"
+dependencies = [
+ "autocfg",
+ "num-integer",
+ "num-traits",
+]
+
 [[package]]
 name = "num-traits"
 version = "0.2.15"
@@ -409,8 +467,15 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "578ede34cf02f8924ab9447f50c28075b4d3e5b269972345e7e0372b38c6cdcd"
 dependencies = [
  "autocfg",
+ "libm",
 ]
 
+[[package]]
+name = "paste"
+version = "1.0.15"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "57c0d7b74b563b49d38dae00a0c37d4d6de9b432382b2892f0574ddcae73fd0a"
+
 [[package]]
 name = "pin-project-lite"
 version = "0.2.9"
@@ -474,6 +539,7 @@ dependencies = [
  "log_buffer",
  "num-derive",
  "num-traits",
+ "tar-no-std",
  "unwind",
  "vcell",
  "void",
@@ -493,7 +559,9 @@ name = "satman"
 version = "0.0.0"
 dependencies = [
  "build_zynq",
+ "byteorder",
  "core_io",
+ "crc",
  "cslice",
  "embedded-hal",
  "io",
@@ -516,6 +584,18 @@ version = "0.1.20"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "d4f410fedcf71af0345d7607d246e7ad15faaadd49d240ee3b24e5dc21a820ac"
 
+[[package]]
+name = "simba"
+version = "0.8.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "50582927ed6f77e4ac020c057f37a268fc6aebc29225050365aacbb9deeeddc4"
+dependencies = [
+ "approx",
+ "num-complex",
+ "num-traits",
+ "paste",
+]
+
 [[package]]
 name = "smoltcp"
 version = "0.7.5"
@@ -538,6 +618,22 @@ dependencies = [
  "unicode-ident",
 ]
 
+[[package]]
+name = "tar-no-std"
+version = "0.1.8"
+source = "git+https://git.m-labs.hk/M-Labs/tar-no-std?rev=2ab6dc5#2ab6dc58e5249c59c4eb03eaf3a119bcdd678d32"
+dependencies = [
+ "arrayvec",
+ "bitflags",
+ "log",
+]
+
+[[package]]
+name = "typenum"
+version = "1.17.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "42ff0bf0c66b8238c6f3b578df37d0b7848e55df8577b3f74f92a69acceeb825"
+
 [[package]]
 name = "unicode-ident"
 version = "1.0.5"

src/gateware/ddmtd.py

@@ -0,0 +1,119 @@
+from migen import *
+from migen.genlib.cdc import PulseSynchronizer, MultiReg
+from misoc.interconnect.csr import *
+
+
+class DDMTDSampler(Module):
+    def __init__(self, cd_ref, main_clk_se):
+        self.ref_beating = Signal()
+        self.main_beating = Signal()
+
+        # # #
+
+        ref_clk = Signal()
+        self.specials +=[
+            # ISERDESE2 can only be driven from fabric via IDELAYE2 (see UG471)
+            Instance("IDELAYE2",
+                    p_DELAY_SRC="DATAIN",
+                    p_HIGH_PERFORMANCE_MODE="TRUE",
+                    p_REFCLK_FREQUENCY=208.3,   # REFCLK frequency from IDELAYCTRL
+                    p_IDELAY_VALUE=0,
+
+                    i_DATAIN=cd_ref.clk,
+
+                    o_DATAOUT=ref_clk
+            ),
+            Instance("ISERDESE2",
+                    p_IOBDELAY="IFD",   # use DDLY as input
+                    p_DATA_RATE="SDR",
+                    p_DATA_WIDTH=2,     # min is 2
+                    p_NUM_CE=1,
+
+                    i_DDLY=ref_clk,
+                    i_CE1=1,
+                    i_CLK=ClockSignal("helper"),
+                    i_CLKDIV=ClockSignal("helper"),
+
+                    o_Q1=self.ref_beating
+            ),
+            Instance("ISERDESE2",
+                    p_DATA_RATE="SDR",
+                    p_DATA_WIDTH=2,     # min is 2
+                    p_NUM_CE=1,
+
+                    i_D=main_clk_se,
+                    i_CE1=1,
+                    i_CLK=ClockSignal("helper"),
+                    i_CLKDIV=ClockSignal("helper"),
+
+                    o_Q1=self.main_beating,
+            ),
+        ]
+
+
+class DDMTDDeglitcherMedianEdge(Module):
+    def __init__(self, counter, input_signal, stable_0_period=100, stable_1_period=100):
+        self.tag = Signal(len(counter))
+        self.detect = Signal()
+
+        stable_0_counter = Signal(reset=stable_0_period - 1, max=stable_0_period)
+        stable_1_counter = Signal(reset=stable_1_period - 1, max=stable_1_period)
+
+        # # #
+
+        # Based on CERN's median edge deglitcher FSM
+        # https://white-rabbit.web.cern.ch/documents/Precise_time_and_frequency_transfer_in_a_White_Rabbit_network.pdf (p.72)
+        fsm = ClockDomainsRenamer("helper")(FSM(reset_state="WAIT_STABLE_0"))
+        self.submodules += fsm
+
+        fsm.act("WAIT_STABLE_0",
+            If(stable_0_counter != 0,
+                NextValue(stable_0_counter, stable_0_counter - 1)
+            ).Else(
+                NextValue(stable_0_counter, stable_0_period - 1),
+                NextState("WAIT_EDGE")
+            ),
+            If(input_signal,
+                NextValue(stable_0_counter, stable_0_period - 1)
+            ),
+        )
+        fsm.act("WAIT_EDGE",
+            If(input_signal,
+                NextValue(self.tag, counter),
+                NextState("GOT_EDGE")
+            )
+        )
+        fsm.act("GOT_EDGE",
+            If(stable_1_counter != 0,
+                NextValue(stable_1_counter, stable_1_counter - 1)
+            ).Else(
+                NextValue(stable_1_counter, stable_1_period - 1),
+                self.detect.eq(1),
+                NextState("WAIT_STABLE_0")
+            ),
+            If(~input_signal,
+                NextValue(self.tag, self.tag + 1),
+                NextValue(stable_1_counter, stable_1_period - 1)
+            ),
+        )
+        
+
+class DDMTD(Module):
+    def __init__(self, counter, input_signal):
+
+        # in helper clock domain
+        self.h_tag = Signal(len(counter))
+        self.h_tag_update = Signal()
+
+        # # #
+
+        deglitcher = DDMTDDeglitcherMedianEdge(counter, input_signal)
+        self.submodules += deglitcher
+
+        self.sync.helper += [
+            self.h_tag_update.eq(0),
+            If(deglitcher.detect,
+                self.h_tag_update.eq(1),
+                self.h_tag.eq(deglitcher.tag)
+               )
+        ]

src/gateware/drtio_aux_controller.py

@@ -1,12 +1,12 @@
 """Auxiliary controller, common to satellite and master"""
 
-from artiq.gateware.drtio.aux_controller import Transmitter, Receiver
+from artiq.gateware.drtio.aux_controller import (max_packet, aux_buffer_count,
+    Transmitter, Receiver)
 from migen.fhdl.simplify import FullMemoryWE
 from misoc.interconnect.csr import *
 from migen_axi.interconnect.sram import SRAM
 from migen_axi.interconnect import axi
 
-max_packet = 1024
 
 class _DRTIOAuxControllerBase(Module):
     def __init__(self, link_layer):
@@ -27,12 +27,12 @@ class DRTIOAuxControllerAxi(_DRTIOAuxControllerBase):
         tx_sdram_if = SRAM(self.transmitter.mem, read_only=False)
         rx_sdram_if = SRAM(self.receiver.mem, read_only=True)
         aw_decoder = axi.AddressDecoder(self.bus.aw,
-            [(lambda a: a[log2_int(max_packet)] == 0, tx_sdram_if.bus.aw),
-             (lambda a: a[log2_int(max_packet)] == 1, rx_sdram_if.bus.aw)],
+            [(lambda a: a[log2_int(max_packet*aux_buffer_count)] == 0, tx_sdram_if.bus.aw),
+             (lambda a: a[log2_int(max_packet*aux_buffer_count)] == 1, rx_sdram_if.bus.aw)],
             register=True)
         ar_decoder = axi.AddressDecoder(self.bus.ar,
-            [(lambda a: a[log2_int(max_packet)] == 0, tx_sdram_if.bus.ar),
-             (lambda a: a[log2_int(max_packet)] == 1, rx_sdram_if.bus.ar)],
+            [(lambda a: a[log2_int(max_packet*aux_buffer_count)] == 0, tx_sdram_if.bus.ar),
+             (lambda a: a[log2_int(max_packet*aux_buffer_count)] == 1, rx_sdram_if.bus.ar)],
             register=True)
         # unlike wb, axi address decoder only connects ar/aw lanes,
         # the rest must also be connected!
@@ -82,4 +82,4 @@ class DRTIOAuxControllerBare(_DRTIOAuxControllerBase):
         return self.receiver.mem.get_port(write_capable=False)
 
     def get_mem_size(self):
-        return max_packet
+        return max_packet*aux_buffer_count

src/gateware/ebaz4205.py

@@ -0,0 +1,307 @@
+#!/usr/bin/env python
+
+import argparse
+
+import analyzer
+import dma
+from artiq.gateware import rtio
+from artiq.gateware.rtio.phy import spi2, ttl_simple
+from artiq.gateware.rtio.xilinx_clocking import fix_serdes_timing_path
+from config import write_csr_file, write_mem_file, write_rustc_cfg_file
+from migen import *
+from migen.build.generic_platform import IOStandard, Misc, Pins, Subsignal
+from migen.build.platforms import ebaz4205
+from migen_axi.integration.soc_core import SoCCore
+from misoc.interconnect.csr import *
+
+_ps = [
+    (
+        "ps",
+        0,
+        Subsignal("clk", Pins("E7"), IOStandard("LVCMOS33"), Misc("SLEW=FAST")),
+        Subsignal("por_b", Pins("C7"), IOStandard("LVCMOS33"), Misc("SLEW=FAST")),
+        Subsignal("srst_b", Pins("B10"), IOStandard("LVCMOS18"), Misc("SLEW=FAST")),
+    )
+]
+
+_ddr = [
+    (
+        "ddr",
+        0,
+        Subsignal(
+            "a",
+            Pins("N2 K2 M3 K3 M4 L1 L4 K4 K1 J4 F5 G4 E4 D4 F4"),
+            IOStandard("SSTL15"),
+        ),
+        Subsignal("ba", Pins("L5 R4 J5"), IOStandard("SSTL15")),
+        Subsignal("cas_n", Pins("P5"), IOStandard("SSTL15")),
+        Subsignal("cke", Pins("N3"), IOStandard("SSTL15")),
+        Subsignal("cs_n", Pins("N1"), IOStandard("SSTL15")),
+        Subsignal("ck_n", Pins("M2"), IOStandard("DIFF_SSTL15"), Misc("SLEW=FAST")),
+        Subsignal("ck_p", Pins("L2"), IOStandard("DIFF_SSTL15"), Misc("SLEW=FAST")),
+        # Pins "T1 Y1" not connected
+        Subsignal("dm", Pins("A1 F1"), IOStandard("SSTL15_T_DCI"), Misc("SLEW=FAST")),
+        Subsignal(
+            "dq",
+            Pins("C3 B3 A2 A4 D3 D1 C1 E1 E2 E3 G3 H3 J3 H2 H1 J1"),
+            # Pins "P1 P3 R3 R1 T4 U4 U2 U3 V1 Y3 W1 Y4 Y2 W3 V2 V3" not connected
+            IOStandard("SSTL15_T_DCI"),
+            Misc("SLEW=FAST"),
+        ),
+        Subsignal(
+            "dqs_n",
+            Pins("B2 F2"),  # Pins "T2 W4" not connected
+            IOStandard("DIFF_SSTL15_T_DCI"),
+            Misc("SLEW=FAST"),
+        ),
+        Subsignal(
+            "dqs_p",
+            Pins("C2 G2"),  # Pins "R2 W5" not connected
+            IOStandard("DIFF_SSTL15_T_DCI"),
+            Misc("SLEW=FAST"),
+        ),
+        Subsignal("vrn", Pins("G5"), IOStandard("SSTL15_T_DCI"), Misc("SLEW=FAST")),
+        Subsignal("vrp", Pins("H5"), IOStandard("SSTL15_T_DCI"), Misc("SLEW=FAST")),
+        Subsignal("drst_n", Pins("B4"), IOStandard("SSTL15"), Misc("SLEW=FAST")),
+        Subsignal("odt", Pins("N5"), IOStandard("SSTL15")),
+        Subsignal("ras_n", Pins("P4"), IOStandard("SSTL15")),
+        Subsignal("we_n", Pins("M5"), IOStandard("SSTL15")),
+    )
+]
+
+# Connector J3
+_i2c = [
+    (
+        "i2c",
+        0,
+        Subsignal("scl", Pins("U12"), IOStandard("LVCMOS33")),
+        Subsignal("sda", Pins("V13"), IOStandard("LVCMOS33")),
+    )
+]
+
+_spi = [
+    (
+        "spi",
+        0,
+        Subsignal("clk", Pins("V20")),
+        Subsignal("mosi", Pins("U20")),
+        Subsignal("cs_n", Pins("P19")),
+        IOStandard("LVCMOS33"),
+    )
+]
+
+
+# Connector DATA1
+def _create_ttl():
+    _ttl = []
+
+    for idx, elem in enumerate([x for x in range(5, 21) if x not in (10, 12)]):
+        _ttl.append(
+            ("ttl", idx, Pins("DATA1:DATA1-{}".format(elem)), IOStandard("LVCMOS33")),
+        )
+    return _ttl
+
+
+class EBAZ4205(SoCCore):
+    def __init__(self, rtio_clk=125e6, acpki=False):
+        self.acpki = acpki
+
+        platform = ebaz4205.Platform()
+        platform.toolchain.bitstream_commands.extend(
+            [
+                "set_property BITSTREAM.GENERAL.COMPRESS True [current_design]",
+            ]
+        )
+        platform.add_extension(_ps)
+        platform.add_extension(_ddr)
+        platform.add_extension(_i2c)
+        platform.add_extension(_spi)
+        platform.add_extension(_create_ttl())
+
+        gmii = platform.request("gmii")
+        platform.add_period_constraint(gmii.rx_clk, 10)
+        platform.add_period_constraint(gmii.tx_clk, 10)
+        platform.add_platform_command(
+            "set_property CLOCK_DEDICATED_ROUTE FALSE [get_nets gmii_tx_clk_IBUF]"
+        )
+
+        ident = self.__class__.__name__
+        if self.acpki:
+            ident = "acpki_" + ident
+        SoCCore.__init__(self, platform=platform, csr_data_width=32, ident=ident)
+        fix_serdes_timing_path(platform)
+        self.config["RTIO_FREQUENCY"] = str(rtio_clk / 1e6)
+        platform.add_period_constraint(self.ps7.cd_sys.clk, 10)
+
+        self.comb += [
+            self.ps7.enet0.enet.gmii.tx_clk.eq(gmii.tx_clk),
+            self.ps7.enet0.enet.gmii.rx_clk.eq(gmii.rx_clk),
+        ]
+        self.clock_domains.cd_eth_rx = ClockDomain(reset_less=False)
+        self.clock_domains.cd_eth_tx = ClockDomain(reset_less=False)
+        self.comb += [
+            ClockSignal("eth_rx").eq(gmii.rx_clk),
+            ClockSignal("eth_tx").eq(gmii.tx_clk),
+        ]
+        self.sync.eth_tx += [
+            gmii.txd.eq(self.ps7.enet0.enet.gmii.txd),
+            gmii.tx_en.eq(self.ps7.enet0.enet.gmii.tx_en),
+        ]
+        self.sync.eth_rx += [
+            self.ps7.enet0.enet.gmii.rxd.eq(gmii.rxd),
+            self.ps7.enet0.enet.gmii.rx_dv.eq(gmii.rx_dv),
+        ]
+
+        # MDIO
+        mdio = platform.request("mdio")
+        self.comb += mdio.mdc.eq(self.ps7.enet0.enet.mdio.mdc)
+        self.specials += Instance(
+            "IOBUF",
+            i_I=self.ps7.enet0.enet.mdio.o,
+            io_IO=mdio.mdio,
+            o_O=self.ps7.enet0.enet.mdio.i,
+            i_T=~self.ps7.enet0.enet.mdio.t_n,
+        )
+
+        # I2C
+        i2c = self.platform.request("i2c")
+        self.specials += [
+            # SCL
+            Instance(
+                "IOBUF",
+                i_I=self.ps7.i2c0.scl.o,
+                io_IO=i2c.scl,
+                o_O=self.ps7.i2c0.scl.i,
+                i_T=~self.ps7.i2c0.scl.t_n,
+            ),
+            # SDA
+            Instance(
+                "IOBUF",
+                i_I=self.ps7.i2c0.sda.o,
+                io_IO=i2c.sda,
+                o_O=self.ps7.i2c0.sda.i,
+                i_T=~self.ps7.i2c0.sda.t_n,
+            ),
+        ]
+
+        self.rtio_channels = []
+        for i in (0, 1):
+            print("USER LED at RTIO channel 0x{:06x}".format(len(self.rtio_channels)))
+            user_led = self.platform.request("user_led", i)
+            phy = ttl_simple.Output(user_led)
+            self.submodules += phy
+            self.rtio_channels.append(rtio.Channel.from_phy(phy))
+
+        for i in range(14):
+            print("TTL at RTIO channel 0x{:06x}".format(len(self.rtio_channels)))
+            ttl = self.platform.request("ttl", i)
+            phy = ttl_simple.InOut(ttl)
+            self.submodules += phy
+            self.rtio_channels.append(rtio.Channel.from_phy(phy))
+
+        print("SPI at RTIO channel 0x{:06x}".format(len(self.rtio_channels)))
+        spi_phy = spi2.SPIMaster(platform.request("spi"))
+        self.submodules += spi_phy
+        self.rtio_channels.append(rtio.Channel.from_phy(spi_phy, ififo_depth=4))
+        self.config["RTIO_LOG_CHANNEL"] = len(self.rtio_channels)
+        self.rtio_channels.append(rtio.LogChannel())
+
+        self.submodules.rtio_tsc = rtio.TSC(glbl_fine_ts_width=3)
+        self.submodules.rtio_core = rtio.Core(self.rtio_tsc, self.rtio_channels)
+        self.csr_devices.append("rtio_core")
+        if self.acpki:
+            import acpki
+
+            self.config["KI_IMPL"] = "acp"
+            self.submodules.rtio = acpki.KernelInitiator(
+                self.rtio_tsc,
+                bus=self.ps7.s_axi_acp,
+                user=self.ps7.s_axi_acp_user,
+                evento=self.ps7.event.o,
+            )
+            self.csr_devices.append("rtio")
+        else:
+            self.config["KI_IMPL"] = "csr"
+            self.submodules.rtio = rtio.KernelInitiator(self.rtio_tsc, now64=True)
+            self.csr_devices.append("rtio")
+
+        self.submodules.rtio_dma = dma.DMA(self.ps7.s_axi_hp0)
+        self.csr_devices.append("rtio_dma")
+
+        self.submodules.cri_con = rtio.CRIInterconnectShared(
+            [self.rtio.cri, self.rtio_dma.cri],
+            [self.rtio_core.cri],
+            enable_routing=True,
+        )
+        self.csr_devices.append("cri_con")
+
+        self.submodules.rtio_moninj = rtio.MonInj(self.rtio_channels)
+        self.csr_devices.append("rtio_moninj")
+
+        self.submodules.rtio_analyzer = analyzer.Analyzer(
+            self.rtio_tsc, self.rtio_core.cri, self.ps7.s_axi_hp1
+        )
+        self.csr_devices.append("rtio_analyzer")
+
+
+class BASE(EBAZ4205):
+    def __init__(self, rtio_clk, acpki):
+        EBAZ4205.__init__(self, rtio_clk, acpki)
+
+
+VARIANTS = {cls.__name__.lower(): cls for cls in [BASE]}
+
+
+def main():
+    parser = argparse.ArgumentParser(
+        description="ARTIQ port to the EBAZ4205 control card of Ebit E9+ BTC miner"
+    )
+    parser.add_argument(
+        "-r", default=None, help="build Rust interface into the specified file"
+    )
+    parser.add_argument(
+        "-m", default=None, help="build Rust memory interface into the specified file"
+    )
+    parser.add_argument(
+        "-c",
+        default=None,
+        help="build Rust compiler configuration into the specified file",
+    )
+    parser.add_argument(
+        "-g", default=None, help="build gateware into the specified directory"
+    )
+    parser.add_argument("--rtio-clk", default=125e6, help="RTIO Clock Frequency (Hz)")
+    parser.add_argument(
+        "-V",
+        "--variant",
+        default="base",
+        help="variant: " "[acpki_]base" "(default: %(default)s)",
+    )
+    args = parser.parse_args()
+
+    rtio_clk = int(args.rtio_clk)
+    variant = args.variant.lower()
+    acpki = variant.startswith("acpki_")
+    if acpki:
+        variant = variant[6:]
+
+    try:
+        cls = VARIANTS[variant]
+    except KeyError:
+        raise SystemExit("Invalid variant (-V/--variant)")
+
+    soc = cls(rtio_clk=rtio_clk, acpki=acpki)
+    soc.finalize()
+
+    if args.r is not None:
+        write_csr_file(soc, args.r)
+    if args.m is not None:
+        write_mem_file(soc, args.m)
+    if args.c is not None:
+        write_rustc_cfg_file(soc, args.c)
+    if args.g is not None:
+        soc.build(build_dir=args.g)
+
+
+if __name__ == "__main__":
+    main()

src/gateware/kasli_soc.py

@@ -20,6 +20,7 @@ from artiq.gateware.drtio.transceiver import gtx_7series, eem_serdes
 from artiq.gateware.drtio.siphaser import SiPhaser7Series
 from artiq.gateware.drtio.rx_synchronizer import XilinxRXSynchronizer
 from artiq.gateware.drtio import *
+from artiq.gateware.wrpll import wrpll
 
 import dma
 import analyzer
@@ -108,6 +109,7 @@ class GenericStandalone(SoCCore):
     def __init__(self, description, acpki=False):
         self.acpki = acpki
         clk_freq = description["rtio_frequency"]
+        with_wrpll = description["enable_wrpll"]
 
         platform = kasli_soc.Platform()
         platform.toolchain.bitstream_commands.extend([
@@ -119,13 +121,6 @@ class GenericStandalone(SoCCore):
         SoCCore.__init__(self, platform=platform, csr_data_width=32, ident=ident, ps_cd_sys=False)
 
         self.config["HW_REV"] = description["hw_rev"]
-        
-
-        self.submodules += SMAClkinForward(self.platform)
-
-        self.config["HAS_SI5324"] = None
-        self.config["SI5324_SOFT_RESET"] = None
-
         clk_synth = platform.request("cdr_clk_clean_fabric")
         clk_synth_se = Signal()
         clk_synth_se_buf = Signal()
@@ -140,6 +135,7 @@ class GenericStandalone(SoCCore):
         ]
         fix_serdes_timing_path(platform)
         self.submodules.bootstrap = GTPBootstrapClock(self.platform, clk_freq)
+        self.config["RTIO_FREQUENCY"] = str(clk_freq/1e6)
         self.config["CLOCK_FREQUENCY"] = int(clk_freq)
 
         self.submodules.sys_crg = zynq_clocking.SYSCRG(self.platform, self.ps7, clk_synth_se_buf)
@@ -149,6 +145,23 @@ class GenericStandalone(SoCCore):
         self.crg = self.ps7 # HACK for eem_7series to find the clock
         self.crg.cd_sys = self.sys_crg.cd_sys
 
+        if with_wrpll:
+            self.submodules.wrpll_refclk = wrpll.FrequencyMultiplier(platform.request("sma_clkin"))
+            self.submodules.wrpll = wrpll.WRPLL(
+                platform=self.platform,
+                cd_ref=self.wrpll_refclk.cd_ref,
+                main_clk_se=clk_synth_se)
+            self.csr_devices.append("wrpll_refclk")
+            self.csr_devices.append("wrpll")
+            self.comb += self.ps7.core.core0.nfiq.eq(self.wrpll.ev.irq)
+            self.config["HAS_SI549"] = None
+            self.config["WRPLL_REF_CLK"] = "SMA_CLKIN"
+        else:
+            self.submodules += SMAClkinForward(self.platform)
+            self.config["HAS_SI5324"] = None
+            self.config["SI5324_SOFT_RESET"] = None
+
+
         self.rtio_channels = []
         has_grabber = any(peripheral["type"] == "grabber" for peripheral in description["peripherals"])
         if has_grabber:
@@ -207,6 +220,7 @@ class GenericStandalone(SoCCore):
 class GenericMaster(SoCCore):
     def __init__(self, description, acpki=False):
         clk_freq = description["rtio_frequency"]
+        with_wrpll = description["enable_wrpll"]
 
         has_drtio_over_eem = any(peripheral["type"] == "shuttler" for peripheral in description["peripherals"])
         self.acpki = acpki
@@ -222,8 +236,6 @@ class GenericMaster(SoCCore):
 
         self.config["HW_REV"] = description["hw_rev"]
 
-        self.submodules += SMAClkinForward(self.platform)
-
         data_pads = [platform.request("sfp", i) for i in range(4)]
 
         self.submodules.gt_drtio = gtx_7series.GTX(
@@ -231,18 +243,23 @@ class GenericMaster(SoCCore):
             pads=data_pads,
             clk_freq=clk_freq)
         self.csr_devices.append("gt_drtio")
+        self.config["RTIO_FREQUENCY"] = str(clk_freq/1e6)
         self.config["CLOCK_FREQUENCY"] = int(clk_freq)
 
         txout_buf = Signal()
         gtx0 = self.gt_drtio.gtxs[0]
         self.specials += Instance("BUFG", i_I=gtx0.txoutclk, o_O=txout_buf)
 
+        ext_async_rst = Signal()
+
         self.submodules.bootstrap = GTPBootstrapClock(self.platform, clk_freq)
         self.submodules.sys_crg = zynq_clocking.SYSCRG(
             self.platform,
             self.ps7,
             txout_buf,
-            clk_sw=gtx0.tx_init.done)
+            clk_sw=self.gt_drtio.stable_clkin.storage,
+            clk_sw_status=gtx0.tx_init.done,
+            ext_async_rst=ext_async_rst)
         self.csr_devices.append("sys_crg")
         self.crg = self.ps7 # HACK for eem_7series to find the clock
         self.crg.cd_sys = self.sys_crg.cd_sys
@@ -250,8 +267,28 @@ class GenericMaster(SoCCore):
             self.bootstrap.cd_bootstrap.clk, self.sys_crg.cd_sys.clk)
         fix_serdes_timing_path(platform)
 
-        self.config["HAS_SI5324"] = None
-        self.config["SI5324_SOFT_RESET"] = None
+        self.comb += ext_async_rst.eq(self.sys_crg.clk_sw_fsm.o_clk_sw & ~gtx0.tx_init.done)
+        self.specials += MultiReg(self.sys_crg.clk_sw_fsm.o_clk_sw & self.sys_crg.mmcm_locked, self.gt_drtio.clk_path_ready, odomain="bootstrap")
+
+        if with_wrpll:
+            clk_synth = platform.request("cdr_clk_clean_fabric")
+            clk_synth_se = Signal()
+            platform.add_period_constraint(clk_synth.p, 8.0)
+            self.specials += Instance("IBUFGDS", p_DIFF_TERM="TRUE", p_IBUF_LOW_PWR="FALSE", i_I=clk_synth.p, i_IB=clk_synth.n, o_O=clk_synth_se)
+            self.submodules.wrpll_refclk = wrpll.FrequencyMultiplier(platform.request("sma_clkin"))
+            self.submodules.wrpll = wrpll.WRPLL(
+                platform=self.platform,
+                cd_ref=self.wrpll_refclk.cd_ref,
+                main_clk_se=clk_synth_se)
+            self.csr_devices.append("wrpll_refclk")
+            self.csr_devices.append("wrpll")
+            self.comb += self.ps7.core.core0.nfiq.eq(self.wrpll.ev.irq)
+            self.config["HAS_SI549"] = None
+            self.config["WRPLL_REF_CLK"] = "SMA_CLKIN"
+        else:
+            self.submodules += SMAClkinForward(self.platform)
+            self.config["HAS_SI5324"] = None
+            self.config["SI5324_SOFT_RESET"] = None
 
         self.rtio_channels = []
         has_grabber = any(peripheral["type"] == "grabber" for peripheral in description["peripherals"])
@@ -393,6 +430,7 @@ class GenericMaster(SoCCore):
 class GenericSatellite(SoCCore):
     def __init__(self, description, acpki=False):
         clk_freq = description["rtio_frequency"]
+        with_wrpll = description["enable_wrpll"]
 
         self.acpki = acpki
 
@@ -419,12 +457,16 @@ class GenericSatellite(SoCCore):
         gtx0 = self.gt_drtio.gtxs[0]
         self.specials += Instance("BUFG", i_I=gtx0.txoutclk, o_O=txout_buf)
 
+        ext_async_rst = Signal()
+
         self.submodules.bootstrap = GTPBootstrapClock(self.platform, clk_freq)
         self.submodules.sys_crg = zynq_clocking.SYSCRG(
             self.platform, 
             self.ps7,
             txout_buf,
-            clk_sw=gtx0.tx_init.done)
+            clk_sw=self.gt_drtio.stable_clkin.storage,
+            clk_sw_status=gtx0.tx_init.done,
+            ext_async_rst=ext_async_rst)
         platform.add_false_path_constraints(
             self.bootstrap.cd_bootstrap.clk, self.sys_crg.cd_sys.clk)
         self.csr_devices.append("sys_crg")
@@ -433,6 +475,9 @@ class GenericSatellite(SoCCore):
 
         fix_serdes_timing_path(platform)
 
+        self.comb += ext_async_rst.eq(self.sys_crg.clk_sw_fsm.o_clk_sw & ~gtx0.tx_init.done)
+        self.specials += MultiReg(self.sys_crg.clk_sw_fsm.o_clk_sw & self.sys_crg.mmcm_locked, self.gt_drtio.clk_path_ready, odomain="bootstrap")
+
         self.rtio_channels = []
         has_grabber = any(peripheral["type"] == "grabber" for peripheral in description["peripherals"])
         if has_grabber:
@@ -515,7 +560,10 @@ class GenericSatellite(SoCCore):
         self.submodules.local_io = SyncRTIO(
             self.rtio_tsc, self.rtio_channels, lane_count=description["sed_lanes"]
         )
-        self.comb += self.drtiosat.async_errors.eq(self.local_io.async_errors)
+        self.comb += [
+            self.drtiosat.async_errors.eq(self.local_io.async_errors),
+            self.local_io.sed_spread_enable.eq(self.drtiosat.sed_spread_enable.storage)
+        ]
 
         self.submodules.cri_con = rtio.CRIInterconnectShared(
             [self.drtiosat.cri, self.rtio_dma.cri, self.rtio.cri],
@@ -537,14 +585,30 @@ class GenericSatellite(SoCCore):
         self.config["RTIO_FREQUENCY"] = str(clk_freq/1e6)
         self.config["CLOCK_FREQUENCY"] = int(clk_freq)
 
-        self.submodules.siphaser = SiPhaser7Series(
-            si5324_clkin=platform.request("cdr_clk"),
-            rx_synchronizer=self.rx_synchronizer,
-            ultrascale=False,
-            rtio_clk_freq=self.gt_drtio.rtio_clk_freq)
-        self.csr_devices.append("siphaser")
-        self.config["HAS_SI5324"] = None
-        self.config["SI5324_SOFT_RESET"] = None
+        if with_wrpll:
+            clk_synth = platform.request("cdr_clk_clean_fabric")
+            clk_synth_se = Signal()
+            platform.add_period_constraint(clk_synth.p, 8.0)
+            self.specials += Instance("IBUFGDS", p_DIFF_TERM="TRUE", p_IBUF_LOW_PWR="FALSE", i_I=clk_synth.p, i_IB=clk_synth.n, o_O=clk_synth_se)
+            self.submodules.wrpll = wrpll.WRPLL(
+                platform=self.platform,
+                cd_ref=self.gt_drtio.cd_rtio_rx0,
+                main_clk_se=clk_synth_se)
+            self.submodules.wrpll_skewtester = wrpll.SkewTester(self.rx_synchronizer)
+            self.csr_devices.append("wrpll_skewtester")
+            self.csr_devices.append("wrpll")
+            self.comb += self.ps7.core.core0.nfiq.eq(self.wrpll.ev.irq)
+            self.config["HAS_SI549"] = None
+            self.config["WRPLL_REF_CLK"] = "GT_CDR"
+        else:
+            self.submodules.siphaser = SiPhaser7Series(
+                si5324_clkin=platform.request("cdr_clk"),
+                rx_synchronizer=self.rx_synchronizer,
+                ultrascale=False,
+                rtio_clk_freq=self.gt_drtio.rtio_clk_freq)
+            self.csr_devices.append("siphaser")
+            self.config["HAS_SI5324"] = None
+            self.config["SI5324_SOFT_RESET"] = None
 
         gtx0 = self.gt_drtio.gtxs[0]
         platform.add_false_path_constraints(

src/gateware/zc706.py

@@ -226,6 +226,7 @@ class _MasterBase(SoCCore):
         self.csr_devices.append("gt_drtio")
 
         self.submodules.rtio_tsc = rtio.TSC(glbl_fine_ts_width=3)
+        ext_async_rst = Signal()
         txout_buf = Signal()
         gtx0 = self.gt_drtio.gtxs[0]
         self.specials += Instance("BUFG", i_I=gtx0.txoutclk, o_O=txout_buf)
@@ -234,12 +235,17 @@ class _MasterBase(SoCCore):
             self.platform, 
             self.ps7, 
             txout_buf,
-            clk_sw=gtx0.tx_init.done,
+            clk_sw=self.gt_drtio.stable_clkin.storage,
+            clk_sw_status=gtx0.tx_init.done,
+            ext_async_rst=ext_async_rst,
             freq=clk_freq)
         platform.add_false_path_constraints(
             self.bootstrap.cd_bootstrap.clk, self.sys_crg.cd_sys.clk)
         self.csr_devices.append("sys_crg")
 
+        self.comb += ext_async_rst.eq(self.sys_crg.clk_sw_fsm.o_clk_sw & ~gtx0.tx_init.done)
+        self.specials += MultiReg(self.sys_crg.clk_sw_fsm.o_clk_sw & self.sys_crg.mmcm_locked, self.gt_drtio.clk_path_ready, odomain="bootstrap")
+
         drtio_csr_group = []
         drtioaux_csr_group = []
         drtioaux_memory_group = []
@@ -361,6 +367,7 @@ class _SatelliteBase(SoCCore):
             clk_freq=clk_freq)
         self.csr_devices.append("gt_drtio")
 
+        ext_async_rst = Signal()
         txout_buf = Signal()
         txout_buf.attr.add("keep")
         gtx0 = self.gt_drtio.gtxs[0]
@@ -373,12 +380,17 @@ class _SatelliteBase(SoCCore):
             self.platform, 
             self.ps7, 
             txout_buf,
-            clk_sw=gtx0.tx_init.done,
+            clk_sw=self.gt_drtio.stable_clkin.storage,
+            clk_sw_status=gtx0.tx_init.done,
+            ext_async_rst=ext_async_rst,
             freq=clk_freq)
         platform.add_false_path_constraints(
             self.bootstrap.cd_bootstrap.clk, self.sys_crg.cd_sys.clk)
         self.csr_devices.append("sys_crg")
 
+        self.comb += ext_async_rst.eq(self.sys_crg.clk_sw_fsm.o_clk_sw & ~gtx0.tx_init.done)
+        self.specials += MultiReg(self.sys_crg.clk_sw_fsm.o_clk_sw & self.sys_crg.mmcm_locked, self.gt_drtio.clk_path_ready, odomain="bootstrap")
+
         drtioaux_csr_group = []
         drtioaux_memory_group = []
         drtiorep_csr_group = []
@@ -475,6 +487,10 @@ class _SatelliteBase(SoCCore):
         self.csr_devices.append("rtio_dma")
 
         self.submodules.local_io = SyncRTIO(self.rtio_tsc, rtio_channels)
+        self.comb += [
+            self.drtiosat.async_errors.eq(self.local_io.async_errors),
+            self.local_io.sed_spread_enable.eq(self.drtiosat.sed_spread_enable.storage)
+        ]
         self.submodules.cri_con = rtio.CRIInterconnectShared(
             [self.drtiosat.cri, self.rtio_dma.cri, self.rtio.cri],
             [self.local_io.cri] + self.drtio_cri,

src/gateware/zynq_clocking.py

@@ -65,7 +65,7 @@ class ClockSwitchFSM(Module):
 
 
 class SYSCRG(Module, AutoCSR):
-    def __init__(self, platform, ps7, main_clk, clk_sw=None, freq=125e6):
+    def __init__(self, platform, ps7, main_clk, clk_sw=None, clk_sw_status=None, freq=125e6, ext_async_rst=None, ):
         # assumes bootstrap clock is same freq as main and sys output
         self.clock_domains.cd_sys = ClockDomain()
         self.clock_domains.cd_sys4x = ClockDomain(reset_less=True)
@@ -88,7 +88,7 @@ class SYSCRG(Module, AutoCSR):
         else:
             self.comb += self.clk_sw_fsm.i_clk_sw.eq(clk_sw)
 
-        mmcm_locked = Signal()
+        self.mmcm_locked = Signal()
         mmcm_sys = Signal()
         mmcm_sys4x = Signal()
         mmcm_sys5x = Signal()
@@ -96,7 +96,7 @@ class SYSCRG(Module, AutoCSR):
         mmcm_fb_clk = Signal()
         self.specials += [
             Instance("MMCME2_ADV",
-                p_STARTUP_WAIT="FALSE", o_LOCKED=mmcm_locked,
+                p_STARTUP_WAIT="FALSE", o_LOCKED=self.mmcm_locked,
                 p_BANDWIDTH="HIGH",
                 p_REF_JITTER1=0.001,
                 p_CLKIN1_PERIOD=period, i_CLKIN1=main_clk,
@@ -125,10 +125,19 @@ class SYSCRG(Module, AutoCSR):
             Instance("BUFG", i_I=mmcm_sys, o_O=self.cd_sys.clk),
             Instance("BUFG", i_I=mmcm_sys4x, o_O=self.cd_sys4x.clk),
             Instance("BUFG", i_I=mmcm_clk208, o_O=self.cd_clk200.clk),
-            AsyncResetSynchronizer(self.cd_sys, ~mmcm_locked),
-            AsyncResetSynchronizer(self.cd_clk200, ~mmcm_locked),
         ]
 
+        if ext_async_rst is not None:
+            self.specials += [
+                AsyncResetSynchronizer(self.cd_sys, ~self.mmcm_locked | ext_async_rst),
+                AsyncResetSynchronizer(self.cd_clk200, ~self.mmcm_locked | ext_async_rst),
+            ]
+        else:
+            self.specials += [
+                AsyncResetSynchronizer(self.cd_sys, ~self.mmcm_locked),
+                AsyncResetSynchronizer(self.cd_clk200, ~self.mmcm_locked),
+            ]
+
         reset_counter = Signal(4, reset=15)
         ic_reset = Signal(reset=1)
         self.sync.clk200 += \
@@ -139,4 +148,7 @@ class SYSCRG(Module, AutoCSR):
             )
         self.specials += Instance("IDELAYCTRL", i_REFCLK=ClockSignal("clk200"), i_RST=ic_reset)
 
-        self.comb += self.current_clock.status.eq(self.clk_sw_fsm.o_clk_sw)
+        if clk_sw_status is None:
+            self.comb += self.current_clock.status.eq(self.clk_sw_fsm.o_clk_sw)
+        else:
+            self.comb += self.current_clock.status.eq(clk_sw_status)

src/libboard_artiq/Cargo.toml.tpl

@@ -10,6 +10,8 @@ name = "libboard_artiq"
 [features]
 target_zc706 = ["libboard_zynq/target_zc706", "libconfig/target_zc706"]
 target_kasli_soc = ["libboard_zynq/target_kasli_soc", "libconfig/target_kasli_soc"]
+target_ebaz4205 = ["libboard_zynq/target_ebaz4205", "libconfig/target_ebaz4205"]
+calibrate_wrpll_skew = []
 
 [build-dependencies]
 build_zynq = { path = "../libbuild_zynq" }

src/libboard_artiq/src/drtio_eem.rs

@@ -185,6 +185,24 @@ unsafe fn align_comma(timer: &mut GlobalTimer) {
     }
 }
 
+pub unsafe fn align_wordslip(timer: &mut GlobalTimer, trx_no: u8) -> bool {
+    pl::csr::eem_transceiver::transceiver_sel_write(trx_no);
+
+    for slip in 0..=1 {
+        pl::csr::eem_transceiver::wordslip_write(slip as u8);
+        timer.delay_us(1);
+        pl::csr::eem_transceiver::comma_align_reset_write(1);
+        timer.delay_us(100);
+
+        if pl::csr::eem_transceiver::comma_read() == 1 {
+            debug!("comma alignment completed with {} wordslip", slip);
+            return true;
+        }
+    }
+
+    false
+}
+
 pub fn init(timer: &mut GlobalTimer, cfg: &Config) {
     for trx_no in 0..pl::csr::CONFIG_EEM_DRTIO_COUNT {
         unsafe {
@@ -222,7 +240,6 @@ pub fn init(timer: &mut GlobalTimer, cfg: &Config) {
 
         unsafe {
             align_comma(timer);
-            pl::csr::eem_transceiver::rx_ready_write(1);
         }
     }
 }

src/libboard_artiq/src/drtioaux.rs

@@ -1,9 +1,10 @@
+use core::slice;
+
 use core_io::{Error as IoError, ErrorKind as IoErrorKind};
 use crc;
 use io::{proto::{ProtoRead, ProtoWrite},
          Cursor};
 use libboard_zynq::{time::Milliseconds, timer::GlobalTimer};
-use libcortex_a9::asm::dmb;
 
 pub use crate::drtioaux_proto::Packet;
 use crate::{drtioaux_proto::Error as ProtocolError, mem::mem::DRTIOAUX_MEM, pl::csr::DRTIOAUX};
@@ -56,30 +57,14 @@ pub fn has_rx_error(linkno: u8) -> bool {
     }
 }
 
-pub fn copy_work_buffer(src: *mut u32, dst: *mut u32, len: isize) {
-    // AXI writes must be 4-byte aligned (drtio proto doesn't care for that),
-    // and AXI burst reads/writes are not implemented yet in gateware
-    // thus the need for a work buffer for transmitting and copying it over
-    unsafe {
-        for i in 0..(len / 4) {
-            *dst.offset(i) = *src.offset(i);
-            //data memory barrier to prevent bursts
-            dmb();
-        }
-    }
-}
-
 fn receive<F, T>(linkno: u8, f: F) -> Result<Option<T>, Error>
 where F: FnOnce(&[u8]) -> Result<T, Error> {
     let linkidx = linkno as usize;
     unsafe {
         if (DRTIOAUX[linkidx].aux_rx_present_read)() == 1 {
-            let ptr = (DRTIOAUX_MEM[linkidx].base + DRTIOAUX_MEM[linkidx].size / 2) as *mut u32;
-            let len = (DRTIOAUX[linkidx].aux_rx_length_read)() as usize;
-            // work buffer to accomodate axi burst reads
-            let mut buf: [u8; 1024] = [0; 1024];
-            copy_work_buffer(ptr, buf.as_mut_ptr() as *mut u32, len as isize);
-            let result = f(&buf[0..len]);
+            let read_ptr = (DRTIOAUX[linkidx].aux_read_pointer_read)() as usize;
+            let ptr = (DRTIOAUX_MEM[linkidx].base + DRTIOAUX_MEM[linkidx].size / 2 + read_ptr * 0x400) as *mut u32;
+            let result = f(slice::from_raw_parts(ptr as *mut u8, 0x400 as usize));
             (DRTIOAUX[linkidx].aux_rx_present_write)(1);
             Ok(Some(result?))
         } else {
@@ -100,15 +85,15 @@ pub fn recv(linkno: u8) -> Result<Option<Packet>, Error> {
 
         let mut reader = Cursor::new(buffer);
 
-        let checksum_at = buffer.len() - 4;
+        let packet = Packet::read_from(&mut reader)?;
+        let padding = (12 - (reader.position() % 8)) % 8;
+        let checksum_at = reader.position() + padding;
         let checksum = crc::crc32::checksum_ieee(&reader.get_ref()[0..checksum_at]);
         reader.set_position(checksum_at);
         if reader.read_u32()? != checksum {
             return Err(Error::CorruptedPacket);
         }
-        reader.set_position(0);
-
-        Ok(Packet::read_from(&mut reader)?)
+        Ok(packet)
     })
 }
 
@@ -130,11 +115,7 @@ where F: FnOnce(&mut [u8]) -> Result<usize, Error> {
     unsafe {
         while (DRTIOAUX[linkno].aux_tx_read)() != 0 {}
         let ptr = DRTIOAUX_MEM[linkno].base as *mut u32;
-        let len = DRTIOAUX_MEM[linkno].size / 2;
-        // work buffer, works with unaligned mem access
-        let mut buf: [u8; 1024] = [0; 1024];
-        let len = f(&mut buf[0..len])?;
-        copy_work_buffer(buf.as_mut_ptr() as *mut u32, ptr, len as isize);
+        let len = f(slice::from_raw_parts_mut(ptr as *mut u8, 0x400 as usize))?;
         (DRTIOAUX[linkno].aux_tx_length_write)(len as u16);
         (DRTIOAUX[linkno].aux_tx_write)(1);
         Ok(())

src/libboard_artiq/src/drtioaux_async.rs

@@ -1,3 +1,5 @@
+use core::slice;
+
 use core_io::{Error as IoError, ErrorKind as IoErrorKind};
 use crc;
 use io::{proto::{ProtoRead, ProtoWrite},
@@ -8,7 +10,7 @@ use nb;
 use void::Void;
 
 pub use crate::drtioaux_proto::Packet;
-use crate::{drtioaux::{copy_work_buffer, has_rx_error, Error},
+use crate::{drtioaux::{has_rx_error, Error},
             mem::mem::DRTIOAUX_MEM,
             pl::csr::DRTIOAUX};
 
@@ -38,12 +40,9 @@ where F: FnOnce(&[u8]) -> Result<T, Error> {
     let linkidx = linkno as usize;
     unsafe {
         if (DRTIOAUX[linkidx].aux_rx_present_read)() == 1 {
-            let ptr = (DRTIOAUX_MEM[linkidx].base + DRTIOAUX_MEM[linkidx].size / 2) as *mut u32;
-            let len = (DRTIOAUX[linkidx].aux_rx_length_read)() as usize;
-            // work buffer to accomodate axi burst reads
-            let mut buf: [u8; 1024] = [0; 1024];
-            copy_work_buffer(ptr, buf.as_mut_ptr() as *mut u32, len as isize);
-            let result = f(&buf[0..len]);
+            let read_ptr = (DRTIOAUX[linkidx].aux_read_pointer_read)() as usize;
+            let ptr = (DRTIOAUX_MEM[linkidx].base + DRTIOAUX_MEM[linkidx].size / 2 + read_ptr * 0x400) as *mut u32;
+            let result = f(slice::from_raw_parts(ptr as *mut u8, 0x400 as usize));
             (DRTIOAUX[linkidx].aux_rx_present_write)(1);
             Ok(Some(result?))
         } else {
@@ -64,15 +63,15 @@ pub async fn recv(linkno: u8) -> Result<Option<Packet>, Error> {
 
         let mut reader = Cursor::new(buffer);
 
-        let checksum_at = buffer.len() - 4;
+        let packet = Packet::read_from(&mut reader)?;
+        let padding = (12 - (reader.position() % 8)) % 8;
+        let checksum_at = reader.position() + padding;
         let checksum = crc::crc32::checksum_ieee(&reader.get_ref()[0..checksum_at]);
         reader.set_position(checksum_at);
         if reader.read_u32()? != checksum {
             return Err(Error::CorruptedPacket);
         }
-        reader.set_position(0);
-
-        Ok(Packet::read_from(&mut reader)?)
+        Ok(packet)
     })
     .await
 }
@@ -103,11 +102,7 @@ where F: FnOnce(&mut [u8]) -> Result<usize, Error> {
     unsafe {
         let _ = block_async!(tx_ready(linkno)).await;
         let ptr = DRTIOAUX_MEM[linkno].base as *mut u32;
-        let len = DRTIOAUX_MEM[linkno].size / 2;
-        // work buffer, works with unaligned mem access
-        let mut buf: [u8; 1024] = [0; 1024];
-        let len = f(&mut buf[0..len])?;
-        copy_work_buffer(buf.as_mut_ptr() as *mut u32, ptr, len as isize);
+        let len = f(slice::from_raw_parts_mut(ptr as *mut u8, 0x400 as usize))?;
         (DRTIOAUX[linkno].aux_tx_length_write)(len as u16);
         (DRTIOAUX[linkno].aux_tx_write)(1);
         Ok(())

src/libboard_artiq/src/drtioaux_proto.rs

@@ -1,11 +1,13 @@
 use core_io::{Error as IoError, Read, Write};
 use io::proto::{ProtoRead, ProtoWrite};
 
+const MAX_PACKET: usize = 1024;
+
 // maximum size of arbitrary payloads
 // used by satellite -> master analyzer, subkernel exceptions
-pub const SAT_PAYLOAD_MAX_SIZE: usize  = /*max size*/512 - /*CRC*/4 - /*packet ID*/1 - /*last*/1 - /*length*/2;
+pub const SAT_PAYLOAD_MAX_SIZE: usize  = /*max size*/MAX_PACKET - /*CRC*/4 - /*packet ID*/1 - /*last*/1 - /*length*/2;
 // used by DDMA, subkernel program data (need to provide extra ID and destination)
-pub const MASTER_PAYLOAD_MAX_SIZE: usize = SAT_PAYLOAD_MAX_SIZE - /*destination*/1 - /*ID*/4;
+pub const MASTER_PAYLOAD_MAX_SIZE: usize = SAT_PAYLOAD_MAX_SIZE - /*source*/1 - /*destination*/1 - /*ID*/4;
 
 #[derive(Debug)]
 pub enum Error {
@@ -19,6 +21,46 @@ impl From<IoError> for Error {
     }
 }
 
+#[derive(PartialEq, Clone, Copy, Debug)]
+#[repr(u8)]
+pub enum PayloadStatus {
+    Middle = 0,
+    First = 1,
+    Last = 2,
+    FirstAndLast = 3,
+}
+
+impl From<u8> for PayloadStatus {
+    fn from(value: u8) -> PayloadStatus {
+        match value {
+            0 => PayloadStatus::Middle,
+            1 => PayloadStatus::First,
+            2 => PayloadStatus::Last,
+            3 => PayloadStatus::FirstAndLast,
+            _ => unreachable!(),
+        }
+    }
+}
+
+impl PayloadStatus {
+    pub fn is_first(self) -> bool {
+        self == PayloadStatus::First || self == PayloadStatus::FirstAndLast
+    }
+
+    pub fn is_last(self) -> bool {
+        self == PayloadStatus::Last || self == PayloadStatus::FirstAndLast
+    }
+
+    pub fn from_status(first: bool, last: bool) -> PayloadStatus {
+        match (first, last) {
+            (true, true) => PayloadStatus::FirstAndLast,
+            (true, false) => PayloadStatus::First,
+            (false, true) => PayloadStatus::Last,
+            (false, false) => PayloadStatus::Middle,
+        }
+    }
+}
+
 #[derive(PartialEq, Debug)]
 pub enum Packet {
     EchoRequest,
@@ -157,31 +199,40 @@ pub enum Packet {
     },
 
     DmaAddTraceRequest {
+        source: u8,
         destination: u8,
         id: u32,
-        last: bool,
+        status: PayloadStatus,
         length: u16,
         trace: [u8; MASTER_PAYLOAD_MAX_SIZE],
     },
     DmaAddTraceReply {
+        source: u8,
+        destination: u8,
+        id: u32,
         succeeded: bool,
     },
     DmaRemoveTraceRequest {
+        source: u8,
         destination: u8,
         id: u32,
     },
     DmaRemoveTraceReply {
+        destination: u8,
         succeeded: bool,
     },
     DmaPlaybackRequest {
+        source: u8,
         destination: u8,
         id: u32,
         timestamp: u64,
     },
     DmaPlaybackReply {
+        destination: u8,
         succeeded: bool,
     },
     DmaPlaybackStatus {
+        source: u8,
         destination: u8,
         id: u32,
         error: u8,
@@ -192,7 +243,7 @@ pub enum Packet {
     SubkernelAddDataRequest {
         destination: u8,
         id: u32,
-        last: bool,
+        status: PayloadStatus,
         length: u16,
         data: [u8; MASTER_PAYLOAD_MAX_SIZE],
     },
@@ -200,41 +251,114 @@ pub enum Packet {
         succeeded: bool,
     },
     SubkernelLoadRunRequest {
+        source: u8,
         destination: u8,
         id: u32,
         run: bool,
+        timestamp: u64,
     },
     SubkernelLoadRunReply {
-        succeeded: bool,
-    },
-    SubkernelStopRequest {
         destination: u8,
-    },
-    SubkernelStopReply {
         succeeded: bool,
     },
     SubkernelFinished {
+        destination: u8,
         id: u32,
         with_exception: bool,
+        exception_src: u8,
     },
     SubkernelExceptionRequest {
+        source: u8,
         destination: u8,
     },
     SubkernelException {
+        destination: u8,
         last: bool,
         length: u16,
-        data: [u8; SAT_PAYLOAD_MAX_SIZE],
+        data: [u8; MASTER_PAYLOAD_MAX_SIZE],
     },
     SubkernelMessage {
+        source: u8,
         destination: u8,
         id: u32,
-        last: bool,
+        status: PayloadStatus,
         length: u16,
         data: [u8; MASTER_PAYLOAD_MAX_SIZE],
     },
     SubkernelMessageAck {
         destination: u8,
     },
+
+    CoreMgmtGetLogRequest {
+        destination: u8,
+        clear: bool,
+    },
+    CoreMgmtClearLogRequest {
+        destination: u8,
+    },
+    CoreMgmtSetLogLevelRequest {
+        destination: u8,
+        log_level: u8,
+    },
+    CoreMgmtSetUartLogLevelRequest {
+        destination: u8,
+        log_level: u8,
+    },
+    CoreMgmtConfigReadRequest {
+        destination: u8,
+        length: u16,
+        key: [u8; MASTER_PAYLOAD_MAX_SIZE],
+    },
+    CoreMgmtConfigReadContinue {
+        destination: u8,
+    },
+    CoreMgmtConfigWriteRequest {
+        destination: u8,
+        last: bool,
+        length: u16,
+        data: [u8; MASTER_PAYLOAD_MAX_SIZE],
+    },
+    CoreMgmtConfigRemoveRequest {
+        destination: u8,
+        length: u16,
+        key: [u8; MASTER_PAYLOAD_MAX_SIZE],
+    },
+    CoreMgmtConfigEraseRequest {
+        destination: u8,
+    },
+    CoreMgmtRebootRequest {
+        destination: u8,
+    },
+    CoreMgmtAllocatorDebugRequest {
+        destination: u8,
+    },
+    CoreMgmtFlashRequest {
+        destination: u8,
+        payload_length: u32,
+    },
+    CoreMgmtFlashAddDataRequest {
+        destination: u8,
+        last: bool,
+        length: u16,
+        data: [u8; MASTER_PAYLOAD_MAX_SIZE],
+    },
+    CoreMgmtDropLinkAck {
+        destination: u8,
+    },
+    CoreMgmtDropLink,
+    CoreMgmtGetLogReply {
+        last: bool,
+        length: u16,
+        data: [u8; SAT_PAYLOAD_MAX_SIZE],
+    },
+    CoreMgmtConfigReadReply {
+        last: bool,
+        length: u16,
+        value: [u8; SAT_PAYLOAD_MAX_SIZE],
+    },
+    CoreMgmtReply {
+        succeeded: bool,
+    },
 }
 
 impl Packet {
@@ -389,39 +513,49 @@ impl Packet {
             }
 
             0xb0 => {
+                let source = reader.read_u8()?;
                 let destination = reader.read_u8()?;
                 let id = reader.read_u32()?;
-                let last = reader.read_bool()?;
+                let status = reader.read_u8()?;
                 let length = reader.read_u16()?;
                 let mut trace: [u8; MASTER_PAYLOAD_MAX_SIZE] = [0; MASTER_PAYLOAD_MAX_SIZE];
                 reader.read_exact(&mut trace[0..length as usize])?;
                 Packet::DmaAddTraceRequest {
+                    source: source,
                     destination: destination,
                     id: id,
-                    last: last,
+                    status: PayloadStatus::from(status),
                     length: length as u16,
                     trace: trace,
                 }
             }
             0xb1 => Packet::DmaAddTraceReply {
+                source: reader.read_u8()?,
+                destination: reader.read_u8()?,
+                id: reader.read_u32()?,
                 succeeded: reader.read_bool()?,
             },
             0xb2 => Packet::DmaRemoveTraceRequest {
+                source: reader.read_u8()?,
                 destination: reader.read_u8()?,
                 id: reader.read_u32()?,
             },
             0xb3 => Packet::DmaRemoveTraceReply {
+                destination: reader.read_u8()?,
                 succeeded: reader.read_bool()?,
             },
             0xb4 => Packet::DmaPlaybackRequest {
+                source: reader.read_u8()?,
                 destination: reader.read_u8()?,
                 id: reader.read_u32()?,
                 timestamp: reader.read_u64()?,
             },
             0xb5 => Packet::DmaPlaybackReply {
+                destination: reader.read_u8()?,
                 succeeded: reader.read_bool()?,
             },
             0xb6 => Packet::DmaPlaybackStatus {
+                source: reader.read_u8()?,
                 destination: reader.read_u8()?,
                 id: reader.read_u32()?,
                 error: reader.read_u8()?,
@@ -432,14 +566,14 @@ impl Packet {
             0xc0 => {
                 let destination = reader.read_u8()?;
                 let id = reader.read_u32()?;
-                let last = reader.read_bool()?;
+                let status = PayloadStatus::from(reader.read_u8()?);
                 let length = reader.read_u16()?;
                 let mut data: [u8; MASTER_PAYLOAD_MAX_SIZE] = [0; MASTER_PAYLOAD_MAX_SIZE];
                 reader.read_exact(&mut data[0..length as usize])?;
                 Packet::SubkernelAddDataRequest {
                     destination: destination,
                     id: id,
-                    last: last,
+                    status: status,
                     length: length as u16,
                     data: data,
                 }
@@ -448,48 +582,52 @@ impl Packet {
                 succeeded: reader.read_bool()?,
             },
             0xc4 => Packet::SubkernelLoadRunRequest {
+                source: reader.read_u8()?,
                 destination: reader.read_u8()?,
                 id: reader.read_u32()?,
                 run: reader.read_bool()?,
+                timestamp: reader.read_u64()?,
             },
             0xc5 => Packet::SubkernelLoadRunReply {
-                succeeded: reader.read_bool()?,
-            },
-            0xc6 => Packet::SubkernelStopRequest {
                 destination: reader.read_u8()?,
-            },
-            0xc7 => Packet::SubkernelStopReply {
                 succeeded: reader.read_bool()?,
             },
             0xc8 => Packet::SubkernelFinished {
+                destination: reader.read_u8()?,
                 id: reader.read_u32()?,
                 with_exception: reader.read_bool()?,
+                exception_src: reader.read_u8()?,
             },
             0xc9 => Packet::SubkernelExceptionRequest {
+                source: reader.read_u8()?,
                 destination: reader.read_u8()?,
             },
             0xca => {
+                let destination = reader.read_u8()?;
                 let last = reader.read_bool()?;
                 let length = reader.read_u16()?;
-                let mut data: [u8; SAT_PAYLOAD_MAX_SIZE] = [0; SAT_PAYLOAD_MAX_SIZE];
+                let mut data: [u8; MASTER_PAYLOAD_MAX_SIZE] = [0; MASTER_PAYLOAD_MAX_SIZE];
                 reader.read_exact(&mut data[0..length as usize])?;
                 Packet::SubkernelException {
+                    destination: destination,
                     last: last,
                     length: length,
                     data: data,
                 }
             }
             0xcb => {
+                let source = reader.read_u8()?;
                 let destination = reader.read_u8()?;
                 let id = reader.read_u32()?;
-                let last = reader.read_bool()?;
+                let status = reader.read_u8()?;
                 let length = reader.read_u16()?;
                 let mut data: [u8; MASTER_PAYLOAD_MAX_SIZE] = [0; MASTER_PAYLOAD_MAX_SIZE];
                 reader.read_exact(&mut data[0..length as usize])?;
                 Packet::SubkernelMessage {
+                    source: source,
                     destination: destination,
                     id: id,
-                    last: last,
+                    status: PayloadStatus::from(status),
                     length: length as u16,
                     data: data,
                 }
@@ -498,6 +636,115 @@ impl Packet {
                 destination: reader.read_u8()?,
             },
 
+            0xd0 => Packet::CoreMgmtGetLogRequest {
+                destination: reader.read_u8()?,
+                clear: reader.read_bool()?,
+            },
+            0xd1 => Packet::CoreMgmtClearLogRequest {
+                destination: reader.read_u8()?,
+            },
+            0xd2 => Packet::CoreMgmtSetLogLevelRequest {
+                destination: reader.read_u8()?,
+                log_level: reader.read_u8()?,
+            },
+            0xd3 => Packet::CoreMgmtSetUartLogLevelRequest {
+                destination: reader.read_u8()?,
+                log_level: reader.read_u8()?,
+            },
+            0xd4 => {
+                let destination = reader.read_u8()?;
+                let length = reader.read_u16()?;
+                let mut key: [u8; MASTER_PAYLOAD_MAX_SIZE] = [0; MASTER_PAYLOAD_MAX_SIZE];
+                reader.read_exact(&mut key[0..length as usize])?;
+                Packet::CoreMgmtConfigReadRequest {
+                    destination: destination,
+                    length: length,
+                    key: key,
+                }
+            }
+            0xd5 => Packet::CoreMgmtConfigReadContinue {
+                destination: reader.read_u8()?,
+            },
+            0xd6 => {
+                let destination = reader.read_u8()?;
+                let last = reader.read_bool()?;
+                let length = reader.read_u16()?;
+                let mut data: [u8; MASTER_PAYLOAD_MAX_SIZE] = [0; MASTER_PAYLOAD_MAX_SIZE];
+                reader.read_exact(&mut data[0..length as usize])?;
+                Packet::CoreMgmtConfigWriteRequest {
+                    destination: destination,
+                    last: last,
+                    length: length,
+                    data: data,
+                }
+            }
+            0xd7 => {
+                let destination = reader.read_u8()?;
+                let length = reader.read_u16()?;
+                let mut key: [u8; MASTER_PAYLOAD_MAX_SIZE] = [0; MASTER_PAYLOAD_MAX_SIZE];
+                reader.read_exact(&mut key[0..length as usize])?;
+                Packet::CoreMgmtConfigRemoveRequest {
+                    destination: destination,
+                    length: length,
+                    key: key,
+                }
+            }
+            0xd8 => Packet::CoreMgmtConfigEraseRequest {
+                destination: reader.read_u8()?,
+            },
+            0xd9 => Packet::CoreMgmtRebootRequest {
+                destination: reader.read_u8()?,
+            },
+            0xda => Packet::CoreMgmtAllocatorDebugRequest {
+                destination: reader.read_u8()?,
+            },
+            0xdb => Packet::CoreMgmtFlashRequest {
+                destination: reader.read_u8()?,
+                payload_length: reader.read_u32()?,
+            },
+            0xdc => {
+                let destination = reader.read_u8()?;
+                let last = reader.read_bool()?;
+                let length = reader.read_u16()?;
+                let mut data: [u8; MASTER_PAYLOAD_MAX_SIZE] = [0; MASTER_PAYLOAD_MAX_SIZE];
+                reader.read_exact(&mut data[0..length as usize])?;
+                Packet::CoreMgmtFlashAddDataRequest {
+                    destination: destination,
+                    last: last,
+                    length: length,
+                    data: data,
+                }
+            }
+            0xdd => Packet::CoreMgmtDropLinkAck {
+                destination: reader.read_u8()?,
+            },
+            0xde => Packet::CoreMgmtDropLink,
+            0xdf => {
+                let last = reader.read_bool()?;
+                let length = reader.read_u16()?;
+                let mut data: [u8; SAT_PAYLOAD_MAX_SIZE] = [0; SAT_PAYLOAD_MAX_SIZE];
+                reader.read_exact(&mut data[0..length as usize])?;
+                Packet::CoreMgmtGetLogReply {
+                    last: last,
+                    length: length,
+                    data: data,
+                }
+            }
+            0xe0 => {
+                let last = reader.read_bool()?;
+                let length = reader.read_u16()?;
+                let mut value: [u8; SAT_PAYLOAD_MAX_SIZE] = [0; SAT_PAYLOAD_MAX_SIZE];
+                reader.read_exact(&mut value[0..length as usize])?;
+                Packet::CoreMgmtConfigReadReply {
+                    last: last,
+                    length: length,
+                    value: value,
+                }
+            }
+            0xe1 => Packet::CoreMgmtReply {
+                succeeded: reader.read_bool()?,
+            },
+
             ty => return Err(Error::UnknownPacket(ty)),
         })
     }
@@ -711,49 +958,69 @@ impl Packet {
             }
 
             Packet::DmaAddTraceRequest {
+                source,
                 destination,
                 id,
-                last,
+                status,
                 trace,
                 length,
             } => {
                 writer.write_u8(0xb0)?;
+                writer.write_u8(source)?;
                 writer.write_u8(destination)?;
                 writer.write_u32(id)?;
-                writer.write_bool(last)?;
+                writer.write_u8(status as u8)?;
                 // trace may be broken down to fit within drtio aux memory limit
                 // will be reconstructed by satellite
                 writer.write_u16(length)?;
                 writer.write_all(&trace[0..length as usize])?;
             }
-            Packet::DmaAddTraceReply { succeeded } => {
+            Packet::DmaAddTraceReply {
+                source,
+                destination,
+                id,
+                succeeded,
+            } => {
                 writer.write_u8(0xb1)?;
+                writer.write_u8(source)?;
+                writer.write_u8(destination)?;
+                writer.write_u32(id)?;
                 writer.write_bool(succeeded)?;
             }
-            Packet::DmaRemoveTraceRequest { destination, id } => {
+            Packet::DmaRemoveTraceRequest {
+                source,
+                destination,
+                id,
+            } => {
                 writer.write_u8(0xb2)?;
+                writer.write_u8(source)?;
                 writer.write_u8(destination)?;
                 writer.write_u32(id)?;
             }
-            Packet::DmaRemoveTraceReply { succeeded } => {
+            Packet::DmaRemoveTraceReply { destination, succeeded } => {
                 writer.write_u8(0xb3)?;
+                writer.write_u8(destination)?;
                 writer.write_bool(succeeded)?;
             }
             Packet::DmaPlaybackRequest {
+                source,
                 destination,
                 id,
                 timestamp,
             } => {
                 writer.write_u8(0xb4)?;
+                writer.write_u8(source)?;
                 writer.write_u8(destination)?;
                 writer.write_u32(id)?;
                 writer.write_u64(timestamp)?;
             }
-            Packet::DmaPlaybackReply { succeeded } => {
+            Packet::DmaPlaybackReply { destination, succeeded } => {
                 writer.write_u8(0xb5)?;
+                writer.write_u8(destination)?;
                 writer.write_bool(succeeded)?;
             }
             Packet::DmaPlaybackStatus {
+                source,
                 destination,
                 id,
                 error,
@@ -761,6 +1028,7 @@ impl Packet {
                 timestamp,
             } => {
                 writer.write_u8(0xb6)?;
+                writer.write_u8(source)?;
                 writer.write_u8(destination)?;
                 writer.write_u32(id)?;
                 writer.write_u8(error)?;
@@ -771,14 +1039,14 @@ impl Packet {
             Packet::SubkernelAddDataRequest {
                 destination,
                 id,
-                last,
+                status,
                 data,
                 length,
             } => {
                 writer.write_u8(0xc0)?;
                 writer.write_u8(destination)?;
                 writer.write_u32(id)?;
-                writer.write_bool(last)?;
+                writer.write_u8(status as u8)?;
                 writer.write_u16(length)?;
                 writer.write_all(&data[0..length as usize])?;
             }
@@ -786,50 +1054,67 @@ impl Packet {
                 writer.write_u8(0xc1)?;
                 writer.write_bool(succeeded)?;
             }
-            Packet::SubkernelLoadRunRequest { destination, id, run } => {
+            Packet::SubkernelLoadRunRequest {
+                source,
+                destination,
+                id,
+                run,
+                timestamp,
+            } => {
                 writer.write_u8(0xc4)?;
+                writer.write_u8(source)?;
                 writer.write_u8(destination)?;
                 writer.write_u32(id)?;
                 writer.write_bool(run)?;
+                writer.write_u64(timestamp)?;
             }
-            Packet::SubkernelLoadRunReply { succeeded } => {
+            Packet::SubkernelLoadRunReply { destination, succeeded } => {
                 writer.write_u8(0xc5)?;
-                writer.write_bool(succeeded)?;
-            }
-            Packet::SubkernelStopRequest { destination } => {
-                writer.write_u8(0xc6)?;
                 writer.write_u8(destination)?;
-            }
-            Packet::SubkernelStopReply { succeeded } => {
-                writer.write_u8(0xc7)?;
                 writer.write_bool(succeeded)?;
             }
-            Packet::SubkernelFinished { id, with_exception } => {
+            Packet::SubkernelFinished {
+                destination,
+                id,
+                with_exception,
+                exception_src,
+            } => {
                 writer.write_u8(0xc8)?;
+                writer.write_u8(destination)?;
                 writer.write_u32(id)?;
                 writer.write_bool(with_exception)?;
+                writer.write_u8(exception_src)?;
             }
-            Packet::SubkernelExceptionRequest { destination } => {
+            Packet::SubkernelExceptionRequest { source, destination } => {
                 writer.write_u8(0xc9)?;
+                writer.write_u8(source)?;
                 writer.write_u8(destination)?;
             }
-            Packet::SubkernelException { last, length, data } => {
+            Packet::SubkernelException {
+                destination,
+                last,
+                length,
+                data,
+            } => {
                 writer.write_u8(0xca)?;
+                writer.write_u8(destination)?;
                 writer.write_bool(last)?;
                 writer.write_u16(length)?;
                 writer.write_all(&data[0..length as usize])?;
             }
             Packet::SubkernelMessage {
+                source,
                 destination,
                 id,
-                last,
+                status,
                 data,
                 length,
             } => {
                 writer.write_u8(0xcb)?;
+                writer.write_u8(source)?;
                 writer.write_u8(destination)?;
                 writer.write_u32(id)?;
-                writer.write_bool(last)?;
+                writer.write_u8(status as u8)?;
                 writer.write_u16(length)?;
                 writer.write_all(&data[0..length as usize])?;
             }
@@ -837,7 +1122,154 @@ impl Packet {
                 writer.write_u8(0xcc)?;
                 writer.write_u8(destination)?;
             }
+
+            Packet::CoreMgmtGetLogRequest { destination, clear } => {
+                writer.write_u8(0xd0)?;
+                writer.write_u8(destination)?;
+                writer.write_bool(clear)?;
+            }
+            Packet::CoreMgmtClearLogRequest { destination } => {
+                writer.write_u8(0xd1)?;
+                writer.write_u8(destination)?;
+            }
+            Packet::CoreMgmtSetLogLevelRequest { destination, log_level } => {
+                writer.write_u8(0xd2)?;
+                writer.write_u8(destination)?;
+                writer.write_u8(log_level)?;
+            }
+            Packet::CoreMgmtSetUartLogLevelRequest { destination, log_level } => {
+                writer.write_u8(0xd3)?;
+                writer.write_u8(destination)?;
+                writer.write_u8(log_level)?;
+            }
+            Packet::CoreMgmtConfigReadRequest {
+                destination,
+                length,
+                key,
+            } => {
+                writer.write_u8(0xd4)?;
+                writer.write_u8(destination)?;
+                writer.write_u16(length)?;
+                writer.write_all(&key[0..length as usize])?;
+            }
+            Packet::CoreMgmtConfigReadContinue { destination } => {
+                writer.write_u8(0xd5)?;
+                writer.write_u8(destination)?;
+            }
+            Packet::CoreMgmtConfigWriteRequest {
+                destination,
+                last,
+                length,
+                data,
+            } => {
+                writer.write_u8(0xd6)?;
+                writer.write_u8(destination)?;
+                writer.write_bool(last)?;
+                writer.write_u16(length)?;
+                writer.write_all(&data[0..length as usize])?;
+            }
+            Packet::CoreMgmtConfigRemoveRequest {
+                destination,
+                length,
+                key,
+            } => {
+                writer.write_u8(0xd7)?;
+                writer.write_u8(destination)?;
+                writer.write_u16(length)?;
+                writer.write_all(&key[0..length as usize])?;
+            }
+            Packet::CoreMgmtConfigEraseRequest { destination } => {
+                writer.write_u8(0xd8)?;
+                writer.write_u8(destination)?;
+            }
+            Packet::CoreMgmtRebootRequest { destination } => {
+                writer.write_u8(0xd9)?;
+                writer.write_u8(destination)?;
+            }
+            Packet::CoreMgmtAllocatorDebugRequest { destination } => {
+                writer.write_u8(0xda)?;
+                writer.write_u8(destination)?;
+            }
+            Packet::CoreMgmtFlashRequest {
+                destination,
+                payload_length,
+            } => {
+                writer.write_u8(0xdb)?;
+                writer.write_u8(destination)?;
+                writer.write_u32(payload_length)?;
+            }
+            Packet::CoreMgmtFlashAddDataRequest {
+                destination,
+                last,
+                length,
+                data,
+            } => {
+                writer.write_u8(0xdc)?;
+                writer.write_u8(destination)?;
+                writer.write_bool(last)?;
+                writer.write_u16(length)?;
+                writer.write_all(&data[..length as usize])?;
+            }
+            Packet::CoreMgmtDropLinkAck { destination } => {
+                writer.write_u8(0xdd)?;
+                writer.write_u8(destination)?;
+            }
+            Packet::CoreMgmtDropLink => writer.write_u8(0xde)?,
+            Packet::CoreMgmtGetLogReply { last, length, data } => {
+                writer.write_u8(0xdf)?;
+                writer.write_bool(last)?;
+                writer.write_u16(length)?;
+                writer.write_all(&data[0..length as usize])?;
+            }
+            Packet::CoreMgmtConfigReadReply { last, length, value } => {
+                writer.write_u8(0xe0)?;
+                writer.write_bool(last)?;
+                writer.write_u16(length)?;
+                writer.write_all(&value[0..length as usize])?;
+            }
+            Packet::CoreMgmtReply { succeeded } => {
+                writer.write_u8(0xe1)?;
+                writer.write_bool(succeeded)?;
+            }
         }
         Ok(())
     }
+
+    pub fn routable_destination(&self) -> Option<u8> {
+        // only for packets that could be re-routed, not only forwarded
+        match self {
+            Packet::DmaAddTraceRequest { destination, .. } => Some(*destination),
+            Packet::DmaAddTraceReply { destination, .. } => Some(*destination),
+            Packet::DmaRemoveTraceRequest { destination, .. } => Some(*destination),
+            Packet::DmaRemoveTraceReply { destination, .. } => Some(*destination),
+            Packet::DmaPlaybackRequest { destination, .. } => Some(*destination),
+            Packet::DmaPlaybackReply { destination, .. } => Some(*destination),
+            Packet::SubkernelLoadRunRequest { destination, .. } => Some(*destination),
+            Packet::SubkernelLoadRunReply { destination, .. } => Some(*destination),
+            Packet::SubkernelMessage { destination, .. } => Some(*destination),
+            Packet::SubkernelMessageAck { destination } => Some(*destination),
+            Packet::SubkernelExceptionRequest { destination, .. } => Some(*destination),
+            Packet::SubkernelException { destination, .. } => Some(*destination),
+            Packet::DmaPlaybackStatus { destination, .. } => Some(*destination),
+            Packet::SubkernelFinished { destination, .. } => Some(*destination),
+            _ => None,
+        }
+    }
+
+    pub fn expects_response(&self) -> bool {
+        // returns true if the routable packet should elicit a response
+        // e.g. reply, ACK packets end a conversation,
+        // and firmware should not wait for response
+        match self {
+            Packet::DmaAddTraceReply { .. }
+            | Packet::DmaRemoveTraceReply { .. }
+            | Packet::DmaPlaybackReply { .. }
+            | Packet::SubkernelLoadRunReply { .. }
+            | Packet::SubkernelMessageAck { .. }
+            | Packet::DmaPlaybackStatus { .. }
+            | Packet::SubkernelFinished { .. }
+            | Packet::CoreMgmtDropLinkAck { .. } => false,
+            _ => true,
+        }
+    }
 }

src/libboard_artiq/src/fiq.rs

@@ -0,0 +1,22 @@
+use libboard_zynq::{println, stdio};
+use libcortex_a9::{interrupt_handler, regs::MPIDR};
+use libregister::RegisterR;
+
+#[cfg(has_si549)]
+use crate::si549;
+
+interrupt_handler!(FIQ, fiq, __irq_stack0_start, __irq_stack1_start, {
+    match MPIDR.read().cpu_id() {
+        0 => {
+            // nFIQ is driven directly and bypass GIC
+            #[cfg(has_si549)]
+            si549::wrpll::interrupt_handler();
+            return;
+        }
+        _ => {}
+    };
+
+    stdio::drop_uart();
+    println!("FIQ");
+    loop {}
+});

src/libboard_artiq/src/io_expander.rs

@@ -1,6 +1,7 @@
 use libboard_zynq::i2c;
 use log::info;
 
+#[cfg(has_virtual_leds)]
 use crate::pl::csr;
 
 // Only the bare minimum registers. Bits/IO connections equivalent between IC types.
@@ -19,11 +20,15 @@ const IODIR_OUT_SFP_LED: u8 = 0x40;
 const IODIR_OUT_SFP0_LED: u8 = 0x40;
 #[cfg(hw_rev = "v1.1")]
 const IODIR_OUT_SFP0_LED: u8 = 0x80;
+#[cfg(has_si549)]
+const IODIR_CLK_SEL: u8 = 0x80; // out
+#[cfg(has_si5324)]
+const IODIR_CLK_SEL: u8 = 0x00; // in
 
 //IO expander port direction
 const IODIR0: [u8; 2] = [
     0xFF & !IODIR_OUT_SFP_TX_DISABLE & !IODIR_OUT_SFP0_LED,
-    0xFF & !IODIR_OUT_SFP_TX_DISABLE & !IODIR_OUT_SFP_LED,
+    0xFF & !IODIR_OUT_SFP_TX_DISABLE & !IODIR_OUT_SFP_LED & !IODIR_CLK_SEL,
 ];
 
 const IODIR1: [u8; 2] = [
@@ -33,6 +38,7 @@ const IODIR1: [u8; 2] = [
 
 pub struct IoExpander {
     address: u8,
+    #[cfg(has_virtual_leds)]
     virtual_led_mapping: &'static [(u8, u8, u8)],
     iodir: [u8; 2],
     out_current: [u8; 2],
@@ -42,17 +48,18 @@ pub struct IoExpander {
 
 impl IoExpander {
     pub fn new(i2c: &mut i2c::I2c, index: u8) -> Result<Self, &'static str> {
-        #[cfg(hw_rev = "v1.0")]
+        #[cfg(all(hw_rev = "v1.0", has_virtual_leds))]
         const VIRTUAL_LED_MAPPING0: [(u8, u8, u8); 2] = [(0, 0, 6), (1, 1, 6)];
-        #[cfg(hw_rev = "v1.1")]
+        #[cfg(all(hw_rev = "v1.1", has_virtual_leds))]
         const VIRTUAL_LED_MAPPING0: [(u8, u8, u8); 2] = [(0, 0, 7), (1, 1, 6)];
-
+        #[cfg(has_virtual_leds)]
         const VIRTUAL_LED_MAPPING1: [(u8, u8, u8); 2] = [(2, 0, 6), (3, 1, 6)];
 
         // Both expanders on SHARED I2C bus
         let mut io_expander = match index {
             0 => IoExpander {
                 address: 0x40,
+                #[cfg(has_virtual_leds)]
                 virtual_led_mapping: &VIRTUAL_LED_MAPPING0,
                 iodir: IODIR0,
                 out_current: [0; 2],
@@ -66,6 +73,7 @@ impl IoExpander {
             },
             1 => IoExpander {
                 address: 0x42,
+                #[cfg(has_virtual_leds)]
                 virtual_led_mapping: &VIRTUAL_LED_MAPPING1,
                 iodir: IODIR1,
                 out_current: [0; 2],

src/libboard_artiq/src/lib.rs

@@ -1,5 +1,7 @@
 #![no_std]
 #![feature(never_type)]
+#![feature(naked_functions)]
+#![feature(asm)]
 
 extern crate core_io;
 extern crate crc;
@@ -19,6 +21,7 @@ pub mod drtioaux;
 #[cfg(has_drtio)]
 pub mod drtioaux_async;
 pub mod drtioaux_proto;
+pub mod fiq;
 #[cfg(feature = "target_kasli_soc")]
 pub mod io_expander;
 pub mod logger;
@@ -35,7 +38,8 @@ pub mod drtio_eem;
 pub mod grabber;
 #[cfg(has_si5324)]
 pub mod si5324;
-
+#[cfg(has_si549)]
+pub mod si549;
 use core::{cmp, str};
 
 pub fn identifier_read(buf: &mut [u8]) -> &str {

src/libboard_artiq/src/si549.rs

@@ -0,0 +1,854 @@
+use embedded_hal::prelude::_embedded_hal_blocking_delay_DelayUs;
+use libboard_zynq::timer::GlobalTimer;
+use log::info;
+
+use crate::pl::csr;
+
+#[cfg(feature = "target_kasli_soc")]
+const ADDRESS: u8 = 0x67;
+
+const ADPLL_MAX: i32 = (950.0 / 0.0001164) as i32;
+
+pub struct DividerConfig {
+    pub hsdiv: u16,
+    pub lsdiv: u8,
+    pub fbdiv: u64,
+}
+
+pub struct FrequencySetting {
+    pub main: DividerConfig,
+    pub helper: DividerConfig,
+}
+
+mod i2c {
+    use super::*;
+
+    #[derive(Clone, Copy)]
+    pub enum DCXO {
+        Main,
+        Helper,
+    }
+
+    fn half_period(timer: &mut GlobalTimer) {
+        timer.delay_us(1)
+    }
+
+    fn sda_i(dcxo: DCXO) -> bool {
+        match dcxo {
+            DCXO::Main => unsafe { csr::wrpll::main_dcxo_sda_in_read() == 1 },
+            DCXO::Helper => unsafe { csr::wrpll::helper_dcxo_sda_in_read() == 1 },
+        }
+    }
+
+    fn sda_oe(dcxo: DCXO, oe: bool) {
+        let val = if oe { 1 } else { 0 };
+        match dcxo {
+            DCXO::Main => unsafe { csr::wrpll::main_dcxo_sda_oe_write(val) },
+            DCXO::Helper => unsafe { csr::wrpll::helper_dcxo_sda_oe_write(val) },
+        };
+    }
+
+    fn sda_o(dcxo: DCXO, o: bool) {
+        let val = if o { 1 } else { 0 };
+        match dcxo {
+            DCXO::Main => unsafe { csr::wrpll::main_dcxo_sda_out_write(val) },
+            DCXO::Helper => unsafe { csr::wrpll::helper_dcxo_sda_out_write(val) },
+        };
+    }
+
+    fn scl_oe(dcxo: DCXO, oe: bool) {
+        let val = if oe { 1 } else { 0 };
+        match dcxo {
+            DCXO::Main => unsafe { csr::wrpll::main_dcxo_scl_oe_write(val) },
+            DCXO::Helper => unsafe { csr::wrpll::helper_dcxo_scl_oe_write(val) },
+        };
+    }
+
+    fn scl_o(dcxo: DCXO, o: bool) {
+        let val = if o { 1 } else { 0 };
+        match dcxo {
+            DCXO::Main => unsafe { csr::wrpll::main_dcxo_scl_out_write(val) },
+            DCXO::Helper => unsafe { csr::wrpll::helper_dcxo_scl_out_write(val) },
+        };
+    }
+
+    pub fn init(dcxo: DCXO, timer: &mut GlobalTimer) -> Result<(), &'static str> {
+        // Set SCL as output, and high level
+        scl_o(dcxo, true);
+        scl_oe(dcxo, true);
+        // Prepare a zero level on SDA so that sda_oe pulls it down
+        sda_o(dcxo, false);
+        // Release SDA
+        sda_oe(dcxo, false);
+
+        // Check the I2C bus is ready
+        half_period(timer);
+        half_period(timer);
+        if !sda_i(dcxo) {
+            // Try toggling SCL a few times
+            for _bit in 0..8 {
+                scl_o(dcxo, false);
+                half_period(timer);
+                scl_o(dcxo, true);
+                half_period(timer);
+            }
+        }
+
+        if !sda_i(dcxo) {
+            return Err("SDA is stuck low and doesn't get unstuck");
+        }
+        Ok(())
+    }
+
+    pub fn start(dcxo: DCXO, timer: &mut GlobalTimer) {
+        // Set SCL high then SDA low
+        scl_o(dcxo, true);
+        half_period(timer);
+        sda_oe(dcxo, true);
+        half_period(timer);
+    }
+
+    pub fn stop(dcxo: DCXO, timer: &mut GlobalTimer) {
+        // First, make sure SCL is low, so that the target releases the SDA line
+        scl_o(dcxo, false);
+        half_period(timer);
+        // Set SCL high then SDA high
+        sda_oe(dcxo, true);
+        scl_o(dcxo, true);
+        half_period(timer);
+        sda_oe(dcxo, false);
+        half_period(timer);
+    }
+
+    pub fn write(dcxo: DCXO, data: u8, timer: &mut GlobalTimer) -> bool {
+        // MSB first
+        for bit in (0..8).rev() {
+            // Set SCL low and set our bit on SDA
+            scl_o(dcxo, false);
+            sda_oe(dcxo, data & (1 << bit) == 0);
+            half_period(timer);
+            // Set SCL high ; data is shifted on the rising edge of SCL
+            scl_o(dcxo, true);
+            half_period(timer);
+        }
+        // Check ack
+        // Set SCL low, then release SDA so that the I2C target can respond
+        scl_o(dcxo, false);
+        half_period(timer);
+        sda_oe(dcxo, false);
+        // Set SCL high and check for ack
+        scl_o(dcxo, true);
+        half_period(timer);
+        // returns true if acked (I2C target pulled SDA low)
+        !sda_i(dcxo)
+    }
+
+    pub fn read(dcxo: DCXO, ack: bool, timer: &mut GlobalTimer) -> u8 {
+        // Set SCL low first, otherwise setting SDA as input may cause a transition
+        // on SDA with SCL high which will be interpreted as START/STOP condition.
+        scl_o(dcxo, false);
+        half_period(timer); // make sure SCL has settled low
+        sda_oe(dcxo, false);
+
+        let mut data: u8 = 0;
+
+        // MSB first
+        for bit in (0..8).rev() {
+            scl_o(dcxo, false);
+            half_period(timer);
+            // Set SCL high and shift data
+            scl_o(dcxo, true);
+            half_period(timer);
+            if sda_i(dcxo) {
+                data |= 1 << bit
+            }
+        }
+        // Send ack
+        // Set SCL low and pull SDA low when acking
+        scl_o(dcxo, false);
+        if ack {
+            sda_oe(dcxo, true)
+        }
+        half_period(timer);
+        // then set SCL high
+        scl_o(dcxo, true);
+        half_period(timer);
+
+        data
+    }
+}
+
+fn write(dcxo: i2c::DCXO, reg: u8, val: u8, timer: &mut GlobalTimer) -> Result<(), &'static str> {
+    i2c::start(dcxo, timer);
+    if !i2c::write(dcxo, ADDRESS << 1, timer) {
+        return Err("Si549 failed to ack write address");
+    }
+    if !i2c::write(dcxo, reg, timer) {
+        return Err("Si549 failed to ack register");
+    }
+    if !i2c::write(dcxo, val, timer) {
+        return Err("Si549 failed to ack value");
+    }
+    i2c::stop(dcxo, timer);
+    Ok(())
+}
+
+fn read(dcxo: i2c::DCXO, reg: u8, timer: &mut GlobalTimer) -> Result<u8, &'static str> {
+    i2c::start(dcxo, timer);
+    if !i2c::write(dcxo, ADDRESS << 1, timer) {
+        return Err("Si549 failed to ack write address");
+    }
+    if !i2c::write(dcxo, reg, timer) {
+        return Err("Si549 failed to ack register");
+    }
+    i2c::stop(dcxo, timer);
+
+    i2c::start(dcxo, timer);
+    if !i2c::write(dcxo, (ADDRESS << 1) | 1, timer) {
+        return Err("Si549 failed to ack read address");
+    }
+    let val = i2c::read(dcxo, false, timer);
+    i2c::stop(dcxo, timer);
+    Ok(val)
+}
+
+fn setup(dcxo: i2c::DCXO, config: &DividerConfig, timer: &mut GlobalTimer) -> Result<(), &'static str> {
+    i2c::init(dcxo, timer)?;
+
+    write(dcxo, 255, 0x00, timer)?; // PAGE
+    write(dcxo, 69, 0x00, timer)?; // Disable FCAL override.
+    write(dcxo, 17, 0x00, timer)?; // Synchronously disable output
+
+    // The Si549 has no ID register, so we check that it responds correctly
+    // by writing values to a RAM-like register and reading them back.
+    for test_value in 0..255 {
+        write(dcxo, 23, test_value, timer)?;
+        let readback = read(dcxo, 23, timer)?;
+        if readback != test_value {
+            return Err("Si549 detection failed");
+        }
+    }
+
+    write(dcxo, 23, config.hsdiv as u8, timer)?;
+    write(dcxo, 24, (config.hsdiv >> 8) as u8 | (config.lsdiv << 4), timer)?;
+    write(dcxo, 26, config.fbdiv as u8, timer)?;
+    write(dcxo, 27, (config.fbdiv >> 8) as u8, timer)?;
+    write(dcxo, 28, (config.fbdiv >> 16) as u8, timer)?;
+    write(dcxo, 29, (config.fbdiv >> 24) as u8, timer)?;
+    write(dcxo, 30, (config.fbdiv >> 32) as u8, timer)?;
+    write(dcxo, 31, (config.fbdiv >> 40) as u8, timer)?;
+
+    write(dcxo, 7, 0x08, timer)?; // Start FCAL
+    timer.delay_us(30_000); // Internal FCAL VCO calibration
+    write(dcxo, 17, 0x01, timer)?; // Synchronously enable output
+
+    Ok(())
+}
+
+pub fn main_setup(timer: &mut GlobalTimer, settings: &FrequencySetting) -> Result<(), &'static str> {
+    unsafe {
+        csr::wrpll::main_dcxo_bitbang_enable_write(1);
+        csr::wrpll::main_dcxo_i2c_address_write(ADDRESS);
+    }
+
+    setup(i2c::DCXO::Main, &settings.main, timer)?;
+
+    // Si549 maximum settling time for large frequency change.
+    timer.delay_us(40_000);
+
+    unsafe {
+        csr::wrpll::main_dcxo_bitbang_enable_write(0);
+    }
+
+    info!("Main Si549 started");
+    Ok(())
+}
+
+pub fn helper_setup(timer: &mut GlobalTimer, settings: &FrequencySetting) -> Result<(), &'static str> {
+    unsafe {
+        csr::wrpll::helper_reset_write(1);
+        csr::wrpll::helper_dcxo_bitbang_enable_write(1);
+        csr::wrpll::helper_dcxo_i2c_address_write(ADDRESS);
+    }
+
+    setup(i2c::DCXO::Helper, &settings.helper, timer)?;
+
+    // Si549 maximum settling time for large frequency change.
+    timer.delay_us(40_000);
+
+    unsafe {
+        csr::wrpll::helper_reset_write(0);
+        csr::wrpll::helper_dcxo_bitbang_enable_write(0);
+    }
+    info!("Helper Si549 started");
+    Ok(())
+}
+
+fn set_adpll(dcxo: i2c::DCXO, adpll: i32) -> Result<(), &'static str> {
+    if adpll.abs() > ADPLL_MAX {
+        return Err("adpll is too large");
+    }
+
+    match dcxo {
+        i2c::DCXO::Main => unsafe {
+            if csr::wrpll::main_dcxo_bitbang_enable_read() == 1 {
+                return Err("Main si549 bitbang mode is active when using gateware i2c");
+            }
+
+            while csr::wrpll::main_dcxo_adpll_busy_read() == 1 {}
+            if csr::wrpll::main_dcxo_nack_read() == 1 {
+                return Err("Main si549 failed to ack adpll write");
+            }
+
+            csr::wrpll::main_dcxo_i2c_address_write(ADDRESS);
+            csr::wrpll::main_dcxo_adpll_write(adpll as u32);
+
+            csr::wrpll::main_dcxo_adpll_stb_write(1);
+        },
+        i2c::DCXO::Helper => unsafe {
+            if csr::wrpll::helper_dcxo_bitbang_enable_read() == 1 {
+                return Err("Helper si549 bitbang mode is active when using gateware i2c");
+            }
+
+            while csr::wrpll::helper_dcxo_adpll_busy_read() == 1 {}
+            if csr::wrpll::helper_dcxo_nack_read() == 1 {
+                return Err("Helper si549 failed to ack adpll write");
+            }
+
+            csr::wrpll::helper_dcxo_i2c_address_write(ADDRESS);
+            csr::wrpll::helper_dcxo_adpll_write(adpll as u32);
+
+            csr::wrpll::helper_dcxo_adpll_stb_write(1);
+        },
+    };
+
+    Ok(())
+}
+
+#[cfg(has_wrpll)]
+pub mod wrpll {
+
+    use super::*;
+
+    const BEATING_PERIOD: i32 = 0x8000;
+    const BEATING_HALFPERIOD: i32 = 0x4000;
+    const COUNTER_WIDTH: u32 = 24;
+    const DIV_WIDTH: u32 = 2;
+
+    // y[n] = b0*x[n] + b1*x[n-1] + b2*x[n-2] - a1*y[n-1] - a2*y[n-2]
+    struct FilterParameters {
+        pub b0: f64,
+        pub b1: f64,
+        pub b2: f64,
+        pub a1: f64,
+        pub a2: f64,
+    }
+
+    #[cfg(rtio_frequency = "100.0")]
+    const LPF: FilterParameters = FilterParameters {
+        b0: 0.03967479060647884,
+        b1: 0.07934958121295768,
+        b2: 0.03967479060647884,
+        a1: -1.3865593741228928,
+        a2: 0.5452585365488082,
+    };
+
+    #[cfg(rtio_frequency = "125.0")]
+    const LPF: FilterParameters = FilterParameters {
+        b0: 0.07209205036273991,
+        b1: 0.14418410072547982,
+        b2: 0.07209205036273991,
+        a1: -0.6114078511562919,
+        a2: -0.10022394739274834,
+    };
+
+    static mut H_ADPLL1: i32 = 0;
+    static mut H_ADPLL2: i32 = 0;
+    static mut PERIOD_ERR1: i32 = 0;
+    static mut PERIOD_ERR2: i32 = 0;
+
+    static mut M_ADPLL1: i32 = 0;
+    static mut M_ADPLL2: i32 = 0;
+    static mut PHASE_ERR1: i32 = 0;
+    static mut PHASE_ERR2: i32 = 0;
+
+    static mut BASE_ADPLL: i32 = 0;
+
+    #[derive(Clone, Copy)]
+    pub enum ISR {
+        RefTag,
+        MainTag,
+    }
+
+    mod tag_collector {
+        use super::*;
+
+        #[cfg(wrpll_ref_clk = "GT_CDR")]
+        static mut TAG_OFFSET: u32 = 8382;
+        #[cfg(wrpll_ref_clk = "SMA_CLKIN")]
+        static mut TAG_OFFSET: u32 = 0;
+        static mut REF_TAG: u32 = 0;
+        static mut REF_TAG_READY: bool = false;
+        static mut MAIN_TAG: u32 = 0;
+        static mut MAIN_TAG_READY: bool = false;
+
+        pub fn reset() {
+            clear_phase_diff_ready();
+            unsafe {
+                REF_TAG = 0;
+                MAIN_TAG = 0;
+            }
+        }
+
+        pub fn clear_phase_diff_ready() {
+            unsafe {
+                REF_TAG_READY = false;
+                MAIN_TAG_READY = false;
+            }
+        }
+
+        pub fn collect_tags(interrupt: ISR) {
+            match interrupt {
+                ISR::RefTag => unsafe {
+                    REF_TAG = csr::wrpll::ref_tag_read();
+                    REF_TAG_READY = true;
+                },
+                ISR::MainTag => unsafe {
+                    MAIN_TAG = csr::wrpll::main_tag_read();
+                    MAIN_TAG_READY = true;
+                },
+            }
+        }
+
+        pub fn phase_diff_ready() -> bool {
+            unsafe { REF_TAG_READY && MAIN_TAG_READY }
+        }
+
+        #[cfg(feature = "calibrate_wrpll_skew")]
+        pub fn set_tag_offset(offset: u32) {
+            unsafe {
+                TAG_OFFSET = offset;
+            }
+        }
+
+        #[cfg(feature = "calibrate_wrpll_skew")]
+        pub fn get_tag_offset() -> u32 {
+            unsafe { TAG_OFFSET }
+        }
+
+        pub fn get_period_error() -> i32 {
+            // n * BEATING_PERIOD - REF_TAG(n) mod BEATING_PERIOD
+            let mut period_error = unsafe { REF_TAG.overflowing_neg().0.rem_euclid(BEATING_PERIOD as u32) as i32 };
+            // mapping tags from [0, 2π] -> [-π, π]
+            if period_error > BEATING_HALFPERIOD {
+                period_error -= BEATING_PERIOD
+            }
+            period_error
+        }
+
+        pub fn get_phase_error() -> i32 {
+            // MAIN_TAG(n) - REF_TAG(n) - TAG_OFFSET mod BEATING_PERIOD
+            let mut phase_error = unsafe {
+                MAIN_TAG
+                    .overflowing_sub(REF_TAG + TAG_OFFSET)
+                    .0
+                    .rem_euclid(BEATING_PERIOD as u32) as i32
+            };
+
+            // mapping tags from [0, 2π] -> [-π, π]
+            if phase_error > BEATING_HALFPERIOD {
+                phase_error -= BEATING_PERIOD
+            }
+            phase_error
+        }
+    }
+
+    fn set_isr(en: bool) {
+        let val = if en { 1 } else { 0 };
+        unsafe {
+            csr::wrpll::ref_tag_ev_enable_write(val);
+            csr::wrpll::main_tag_ev_enable_write(val);
+        }
+    }
+
+    fn set_base_adpll() -> Result<(), &'static str> {
+        let count2adpll =
+            |error: i32| ((error as f64 * 1e6) / (0.0001164 * (1 << (COUNTER_WIDTH - DIV_WIDTH)) as f64)) as i32;
+
+        let (ref_count, main_count) = get_freq_counts();
+        unsafe {
+            BASE_ADPLL = count2adpll(ref_count as i32 - main_count as i32);
+            set_adpll(i2c::DCXO::Main, BASE_ADPLL)?;
+            set_adpll(i2c::DCXO::Helper, BASE_ADPLL)?;
+        }
+        Ok(())
+    }
+
+    fn get_freq_counts() -> (u32, u32) {
+        unsafe {
+            csr::wrpll::frequency_counter_update_write(1);
+            while csr::wrpll::frequency_counter_busy_read() == 1 {}
+            #[cfg(wrpll_ref_clk = "GT_CDR")]
+            let ref_count = csr::wrpll::frequency_counter_counter_rtio_rx0_read();
+            #[cfg(wrpll_ref_clk = "SMA_CLKIN")]
+            let ref_count = csr::wrpll::frequency_counter_counter_ref_read();
+            let main_count = csr::wrpll::frequency_counter_counter_sys_read();
+
+            (ref_count, main_count)
+        }
+    }
+
+    fn reset_plls(timer: &mut GlobalTimer) -> Result<(), &'static str> {
+        unsafe {
+            H_ADPLL1 = 0;
+            H_ADPLL2 = 0;
+            PERIOD_ERR1 = 0;
+            PERIOD_ERR2 = 0;
+            M_ADPLL1 = 0;
+            M_ADPLL2 = 0;
+            PHASE_ERR1 = 0;
+            PHASE_ERR2 = 0;
+        }
+        set_adpll(i2c::DCXO::Main, 0)?;
+        set_adpll(i2c::DCXO::Helper, 0)?;
+        // wait for adpll to transfer and DCXO to settle
+        timer.delay_us(200);
+        Ok(())
+    }
+
+    fn clear_pending(interrupt: ISR) {
+        match interrupt {
+            ISR::RefTag => unsafe { csr::wrpll::ref_tag_ev_pending_write(1) },
+            ISR::MainTag => unsafe { csr::wrpll::main_tag_ev_pending_write(1) },
+        };
+    }
+
+    fn is_pending(interrupt: ISR) -> bool {
+        match interrupt {
+            ISR::RefTag => unsafe { csr::wrpll::ref_tag_ev_pending_read() == 1 },
+            ISR::MainTag => unsafe { csr::wrpll::main_tag_ev_pending_read() == 1 },
+        }
+    }
+
+    pub fn interrupt_handler() {
+        if is_pending(ISR::RefTag) {
+            tag_collector::collect_tags(ISR::RefTag);
+            clear_pending(ISR::RefTag);
+            helper_pll().expect("failed to run helper DCXO PLL");
+        }
+
+        if is_pending(ISR::MainTag) {
+            tag_collector::collect_tags(ISR::MainTag);
+            clear_pending(ISR::MainTag);
+        }
+
+        if tag_collector::phase_diff_ready() {
+            main_pll().expect("failed to run main DCXO PLL");
+            tag_collector::clear_phase_diff_ready();
+        }
+    }
+
+    fn helper_pll() -> Result<(), &'static str> {
+        let period_err = tag_collector::get_period_error();
+        unsafe {
+            let adpll = ((LPF.b0 * period_err as f64) + (LPF.b1 * PERIOD_ERR1 as f64) + (LPF.b2 * PERIOD_ERR2 as f64)
+                - (LPF.a1 * H_ADPLL1 as f64)
+                - (LPF.a2 * H_ADPLL2 as f64)) as i32;
+            set_adpll(i2c::DCXO::Helper, BASE_ADPLL + adpll)?;
+            H_ADPLL2 = H_ADPLL1;
+            PERIOD_ERR2 = PERIOD_ERR1;
+            H_ADPLL1 = adpll;
+            PERIOD_ERR1 = period_err;
+        };
+        Ok(())
+    }
+
+    fn main_pll() -> Result<(), &'static str> {
+        let phase_err = tag_collector::get_phase_error();
+        unsafe {
+            let adpll = ((LPF.b0 * phase_err as f64) + (LPF.b1 * PHASE_ERR1 as f64) + (LPF.b2 * PHASE_ERR2 as f64)
+                - (LPF.a1 * M_ADPLL1 as f64)
+                - (LPF.a2 * M_ADPLL2 as f64)) as i32;
+            set_adpll(i2c::DCXO::Main, BASE_ADPLL + adpll)?;
+            M_ADPLL2 = M_ADPLL1;
+            PHASE_ERR2 = PHASE_ERR1;
+            M_ADPLL1 = adpll;
+            PHASE_ERR1 = phase_err;
+        };
+        Ok(())
+    }
+
+    #[cfg(wrpll_ref_clk = "GT_CDR")]
+    fn test_skew(timer: &mut GlobalTimer) -> Result<(), &'static str> {
+        // wait for PLL to stabilize
+        timer.delay_us(20_000);
+
+        info!("testing the skew of SYS CLK...");
+        if has_timing_error(timer) {
+            return Err("the skew cannot satisfy setup/hold time constraint of RX synchronizer");
+        }
+        info!("the skew of SYS CLK met the timing constraint");
+        Ok(())
+    }
+
+    #[cfg(wrpll_ref_clk = "GT_CDR")]
+    fn has_timing_error(timer: &mut GlobalTimer) -> bool {
+        unsafe {
+            csr::wrpll_skewtester::error_write(1);
+        }
+        timer.delay_us(5_000);
+        unsafe { csr::wrpll_skewtester::error_read() == 1 }
+    }
+
+    #[cfg(feature = "calibrate_wrpll_skew")]
+    fn find_edge(target: bool, timer: &mut GlobalTimer) -> Result<u32, &'static str> {
+        const STEP: u32 = 8;
+        const STABLE_THRESHOLD: u32 = 10;
+
+        enum FSM {
+            Init,
+            WaitEdge,
+            GotEdge,
+        }
+
+        let mut state: FSM = FSM::Init;
+        let mut offset: u32 = tag_collector::get_tag_offset();
+        let mut median_edge: u32 = 0;
+        let mut stable_counter: u32 = 0;
+
+        for _ in 0..(BEATING_PERIOD as u32 / STEP) as usize {
+            tag_collector::set_tag_offset(offset);
+            offset += STEP;
+            // wait for PLL to stabilize
+            timer.delay_us(20_000);
+
+            let error = has_timing_error(timer);
+            // A median edge deglitcher
+            match state {
+                FSM::Init => {
+                    if error != target {
+                        stable_counter += 1;
+                    } else {
+                        stable_counter = 0;
+                    }
+
+                    if stable_counter >= STABLE_THRESHOLD {
+                        state = FSM::WaitEdge;
+                        stable_counter = 0;
+                    }
+                }
+                FSM::WaitEdge => {
+                    if error == target {
+                        state = FSM::GotEdge;
+                        median_edge = offset;
+                    }
+                }
+                FSM::GotEdge => {
+                    if error != target {
+                        median_edge += STEP;
+                        stable_counter = 0;
+                    } else {
+                        stable_counter += 1;
+                    }
+
+                    if stable_counter >= STABLE_THRESHOLD {
+                        return Ok(median_edge);
+                    }
+                }
+            }
+        }
+        return Err("failed to find timing error edge");
+    }
+
+    #[cfg(feature = "calibrate_wrpll_skew")]
+    fn calibrate_skew(timer: &mut GlobalTimer) -> Result<(), &'static str> {
+        info!("calibrating skew to meet timing constraint...");
+
+        // clear calibrated value
+        tag_collector::set_tag_offset(0);
+        let rising = find_edge(true, timer)? as i32;
+        let falling = find_edge(false, timer)? as i32;
+
+        let width = BEATING_PERIOD - (falling - rising);
+        let result = falling + width / 2;
+        tag_collector::set_tag_offset(result as u32);
+
+        info!(
+            "calibration successful, error zone: {} -> {}, width: {} ({}deg), middle of working region: {}",
+            rising,
+            falling,
+            width,
+            360 * width / BEATING_PERIOD,
+            result,
+        );
+
+        Ok(())
+    }
+
+    pub fn select_recovered_clock(rc: bool, timer: &mut GlobalTimer) {
+        set_isr(false);
+
+        if rc {
+            tag_collector::reset();
+            reset_plls(timer).expect("failed to reset main and helper PLL");
+
+            // get within capture range
+            set_base_adpll().expect("failed to set base adpll");
+
+            // clear gateware pending flag
+            clear_pending(ISR::RefTag);
+            clear_pending(ISR::MainTag);
+
+            // use nFIQ to avoid IRQ being disabled by mutex lock and mess up PLL
+            set_isr(true);
+            info!("WRPLL interrupt enabled");
+
+            #[cfg(feature = "calibrate_wrpll_skew")]
+            calibrate_skew(timer).expect("failed to set the correct skew");
+
+            #[cfg(wrpll_ref_clk = "GT_CDR")]
+            test_skew(timer).expect("skew test failed");
+        }
+    }
+}
+
+#[cfg(has_wrpll_refclk)]
+pub mod wrpll_refclk {
+    use super::*;
+
+    pub struct MmcmSetting {
+        pub clkout0_reg1: u16,  //0x08
+        pub clkout0_reg2: u16,  //0x09
+        pub clkfbout_reg1: u16, //0x14
+        pub clkfbout_reg2: u16, //0x15
+        pub div_reg: u16,       //0x16
+        pub lock_reg1: u16,     //0x18
+        pub lock_reg2: u16,     //0x19
+        pub lock_reg3: u16,     //0x1A
+        pub power_reg: u16,     //0x28
+        pub filt_reg1: u16,     //0x4E
+        pub filt_reg2: u16,     //0x4F
+    }
+
+    fn one_clock_cycle() {
+        unsafe {
+            csr::wrpll_refclk::mmcm_dclk_write(1);
+            csr::wrpll_refclk::mmcm_dclk_write(0);
+        }
+    }
+
+    fn set_addr(address: u8) {
+        unsafe {
+            csr::wrpll_refclk::mmcm_daddr_write(address);
+        }
+    }
+
+    fn set_data(value: u16) {
+        unsafe {
+            csr::wrpll_refclk::mmcm_din_write(value);
+        }
+    }
+
+    fn set_enable(en: bool) {
+        unsafe {
+            let val = if en { 1 } else { 0 };
+            csr::wrpll_refclk::mmcm_den_write(val);
+        }
+    }
+
+    fn set_write_enable(en: bool) {
+        unsafe {
+            let val = if en { 1 } else { 0 };
+            csr::wrpll_refclk::mmcm_dwen_write(val);
+        }
+    }
+
+    fn get_data() -> u16 {
+        unsafe { csr::wrpll_refclk::mmcm_dout_read() }
+    }
+
+    fn drp_ready() -> bool {
+        unsafe { csr::wrpll_refclk::mmcm_dready_read() == 1 }
+    }
+
+    #[allow(dead_code)]
+    fn read(address: u8) -> u16 {
+        set_addr(address);
+        set_enable(true);
+        // Set DADDR on the mmcm and assert DEN for one clock cycle
+        one_clock_cycle();
+
+        set_enable(false);
+        while !drp_ready() {
+            // keep the clock signal until data is ready
+            one_clock_cycle();
+        }
+        get_data()
+    }
+
+    fn write(address: u8, value: u16) {
+        set_addr(address);
+        set_data(value);
+        set_write_enable(true);
+        set_enable(true);
+        // Set DADDR, DI on the mmcm and assert DWE, DEN for one clock cycle
+        one_clock_cycle();
+
+        set_write_enable(false);
+        set_enable(false);
+        while !drp_ready() {
+            // keep the clock signal until write is finished
+            one_clock_cycle();
+        }
+    }
+
+    fn reset(rst: bool) {
+        unsafe {
+            let val = if rst { 1 } else { 0 };
+            csr::wrpll_refclk::mmcm_reset_write(val)
+        }
+    }
+
+    pub fn setup(timer: &mut GlobalTimer, settings: MmcmSetting, mmcm_bypass: bool) -> Result<(), &'static str> {
+        unsafe {
+            csr::wrpll_refclk::refclk_reset_write(1);
+        }
+
+        if mmcm_bypass {
+            info!("Bypassing mmcm");
+            unsafe {
+                csr::wrpll_refclk::mmcm_bypass_write(1);
+            }
+        } else {
+            // Based on "DRP State Machine" from XAPP888
+            // hold reset HIGH during mmcm config
+            reset(true);
+            write(0x08, settings.clkout0_reg1);
+            write(0x09, settings.clkout0_reg2);
+            write(0x14, settings.clkfbout_reg1);
+            write(0x15, settings.clkfbout_reg2);
+            write(0x16, settings.div_reg);
+            write(0x18, settings.lock_reg1);
+            write(0x19, settings.lock_reg2);
+            write(0x1A, settings.lock_reg3);
+            write(0x28, settings.power_reg);
+            write(0x4E, settings.filt_reg1);
+            write(0x4F, settings.filt_reg2);
+            reset(false);
+
+            // wait for the mmcm to lock
+            timer.delay_us(100);
+
+            let locked = unsafe { csr::wrpll_refclk::mmcm_locked_read() == 1 };
+            if !locked {
+                return Err("mmcm failed to generate 125MHz ref clock from SMA CLKIN");
+            }
+        }
+
+        unsafe {
+            csr::wrpll_refclk::refclk_reset_write(0);
+        }
+
+        Ok(())
+    }
+}

src/libbuild_zynq/link.x

@@ -10,7 +10,9 @@ SECTIONS
     __text_start = .;
     .text :
     {
+        __exceptions_start = .;
         KEEP(*(.text.exceptions));
+        __exceptions_end = .;
         *(.text.boot);
         *(.text .text.*);
     } > SDRAM

src/libdwarf/src/eh.rs

@@ -85,10 +85,7 @@ unsafe fn get_ttype_entry(
         encoding | DW_EH_PE_pcrel,
         ttype_base,
     )
-    .map(|v| match v {
-        ttype_base => None,
-        ttype_entry => Some(ttype_entry as *const u8),
-    })
+    .map(|v| (v != ttype_base).then(|| v as *const u8))
 }
 
 pub unsafe fn find_eh_action(

src/libio/cursor.rs

@@ -45,7 +45,10 @@ impl<T: AsRef<[u8]>> Read for Cursor<T> {
     fn read(&mut self, buf: &mut [u8]) -> Result<usize, IoError> {
         let data = &self.inner.as_ref()[self.pos..];
         let len = buf.len().min(data.len());
-        buf[..len].copy_from_slice(&data[..len]);
+        // ``copy_from_slice`` generates AXI bursts, use a regular loop instead
+        for i in 0..len {
+            buf[i] = data[i];
+        }
         self.pos += len;
         Ok(len)
     }
@@ -55,7 +58,9 @@ impl Write for Cursor<&mut [u8]> {
     fn write(&mut self, buf: &[u8]) -> Result<usize, IoError> {
         let data = &mut self.inner[self.pos..];
         let len = buf.len().min(data.len());
-        data[..len].copy_from_slice(&buf[..len]);
+        for i in 0..len {
+            data[i] = buf[i];
+        }
         self.pos += len;
         Ok(len)
     }
@@ -68,7 +73,6 @@ impl Write for Cursor<&mut [u8]> {
 
 #[cfg(feature = "alloc")]
 impl Write for Cursor<Vec<u8>> {
-    #[inline]
     fn write(&mut self, buf: &[u8]) -> Result<usize, IoError> {
         self.inner.extend_from_slice(buf);
         Ok(buf.len())

src/libksupport/Cargo.toml.tpl

@@ -32,3 +32,9 @@ unwind = { path = "../libunwind" }
 libc = { path = "../libc" }
 io = { path = "../libio" }
 libboard_artiq = { path = "../libboard_artiq" }
+
+[dependencies.nalgebra]
+git = "https://git.m-labs.hk/M-Labs/nalgebra.git"
+rev = "dd00f9b"
+default-features = false
+features = ["libm", "alloc"]

src/libksupport/src/eh_artiq.rs

@@ -14,8 +14,10 @@
 
 use core::mem;
 
-use cslice::CSlice;
+use core_io::Error as ReadError;
+use cslice::{AsCSlice, CSlice};
 use dwarf::eh::{self, EHAction, EHContext};
+use io::{Cursor, ProtoRead};
 use libc::{c_int, c_void, uintptr_t};
 use log::{error, trace};
 use unwind as uw;
@@ -220,8 +222,6 @@ pub unsafe fn artiq_personality(
 }
 
 pub unsafe extern "C" fn raise(exception: *const Exception) -> ! {
-    use cslice::AsCSlice;
-
     let count = EXCEPTION_BUFFER.exception_count;
     let stack = &mut EXCEPTION_BUFFER.exception_stack;
     let diff = exception as isize - EXCEPTION_BUFFER.exceptions.as_ptr() as isize;
@@ -295,6 +295,60 @@ pub unsafe extern "C" fn raise(exception: *const Exception) -> ! {
     unreachable!();
 }
 
+fn read_exception_string<'a>(reader: &mut Cursor<&[u8]>) -> Result<CSlice<'a, u8>, ReadError> {
+    let len = reader.read_u32()? as usize;
+    if len == usize::MAX {
+        let data = reader.read_u32()?;
+        Ok(unsafe { CSlice::new(data as *const u8, len) })
+    } else {
+        let pos = reader.position();
+        let slice = unsafe {
+            let ptr = reader.get_ref().as_ptr().offset(pos as isize);
+            CSlice::new(ptr, len)
+        };
+        reader.set_position(pos + len);
+        Ok(slice)
+    }
+}
+
+fn read_exception(raw_exception: &[u8]) -> Result<Exception, ReadError> {
+    let mut reader = Cursor::new(raw_exception);
+
+    let mut byte = reader.read_u8()?;
+    // to sync
+    while byte != 0x5a {
+        byte = reader.read_u8()?;
+    }
+    // skip sync bytes, 0x09 indicates exception
+    while byte != 0x09 {
+        byte = reader.read_u8()?;
+    }
+    let _len = reader.read_u32()?;
+    // ignore the remaining exceptions, stack traces etc. - unwinding from another device would be unwise anyway
+    Ok(Exception {
+        id: reader.read_u32()?,
+        message: read_exception_string(&mut reader)?,
+        param: [
+            reader.read_u64()? as i64,
+            reader.read_u64()? as i64,
+            reader.read_u64()? as i64,
+        ],
+        file: read_exception_string(&mut reader)?,
+        line: reader.read_u32()?,
+        column: reader.read_u32()?,
+        function: read_exception_string(&mut reader)?,
+    })
+}
+
+pub fn raise_raw(raw_exception: &[u8]) -> ! {
+    use crate::artiq_raise;
+    if let Ok(exception) = read_exception(raw_exception) {
+        unsafe { raise(&exception) };
+    } else {
+        artiq_raise!("SubkernelError", "Error passing exception");
+    }
+}
+
 pub unsafe extern "C" fn resume() -> ! {
     trace!("resume");
     assert!(EXCEPTION_BUFFER.exception_count != 0);
@@ -421,20 +475,30 @@ extern "C" fn stop_fn(
     }
 }
 
-// Must be kept in sync with preallocate_runtime_exception_names() in artiq/language/embedding_map.py
-static EXCEPTION_ID_LOOKUP: [(&str, u32); 12] = [
-    ("RuntimeError", 0),
-    ("RTIOUnderflow", 1),
-    ("RTIOOverflow", 2),
-    ("RTIODestinationUnreachable", 3),
-    ("DMAError", 4),
-    ("I2CError", 5),
-    ("CacheError", 6),
-    ("SPIError", 7),
-    ("ZeroDivisionError", 8),
-    ("IndexError", 9),
-    ("UnwrapNoneError", 10),
-    ("SubkernelError", 11),
+// Must be kept in sync with preallocate_runtime_exception_names() in `artiq.compiler.embedding`
+static EXCEPTION_ID_LOOKUP: [(&str, u32); 22] = [
+    ("RTIOUnderflow", 0),
+    ("RTIOOverflow", 1),
+    ("RTIODestinationUnreachable", 2),
+    ("DMAError", 3),
+    ("I2CError", 4),
+    ("CacheError", 5),
+    ("SPIError", 6),
+    ("SubkernelError", 7),
+    ("AssertionError", 8),
+    ("AttributeError", 9),
+    ("IndexError", 10),
+    ("IOError", 11),
+    ("KeyError", 12),
+    ("NotImplementedError", 13),
+    ("OverflowError", 14),
+    ("RuntimeError", 15),
+    ("TimeoutError", 16),
+    ("TypeError", 17),
+    ("ValueError", 18),
+    ("ZeroDivisionError", 19),
+    ("LinAlgError", 20),
+    ("UnwrapNoneError", 21),
 ];
 
 pub fn get_exception_id(name: &str) -> u32 {
@@ -469,3 +533,29 @@ macro_rules! artiq_raise {
     }};
     ($name:expr, $message:expr) => {{ artiq_raise!($name, $message, 0, 0, 0) }};
 }
+
+/// Takes as input exception id from host
+/// Generates a new exception with:
+///   * `id` set to `exn_id`
+///   * `message` set to corresponding exception name from `EXCEPTION_ID_LOOKUP`
+///
+/// The message is matched on host to ensure correct exception is being referred
+/// This test checks the synchronization of exception ids for runtime errors
+#[no_mangle]
+pub extern "C" fn test_exception_id_sync(exn_id: u32) {
+    let message = EXCEPTION_ID_LOOKUP
+        .iter()
+        .find_map(|&(name, id)| if id == exn_id { Some(name) } else { None })
+        .unwrap_or("unallocated internal exception id");
+
+    let exn = Exception {
+        id: exn_id,
+        file: file!().as_c_slice(),
+        line: 0,
+        column: 0,
+        function: "test_exception_id_sync".as_c_slice(),
+        message: message.as_c_slice(),
+        param: [0, 0, 0],
+    };
+    unsafe { raise(&exn) };
+}

src/libksupport/src/kernel/api.rs

@@ -9,7 +9,7 @@ use log::{info, warn};
 use super::subkernel;
 use super::{cache,
             core1::rtio_get_destination_status,
-            dma,
+            dma, linalg,
             rpc::{rpc_recv, rpc_send, rpc_send_async}};
 use crate::{eh_artiq, i2c, rtio};
 
@@ -303,6 +303,7 @@ pub fn resolve(required: &[u8]) -> Option<u32> {
         api_libm_f64f64f64!(nextafter),
         api_libm_f64f64f64!(pow),
         api_libm_f64f64!(round),
+        api_libm_f64f64!(rint),
         api_libm_f64f64!(sin),
         api_libm_f64f64!(sinh),
         api_libm_f64f64!(sqrt),
@@ -318,6 +319,26 @@ pub fn resolve(required: &[u8]) -> Option<u32> {
             }
             api!(yn = yn)
         },
+
+        // linalg
+        api!(np_linalg_cholesky = linalg::np_linalg_cholesky),
+        api!(np_linalg_qr = linalg::np_linalg_qr),
+        api!(np_linalg_svd = linalg::np_linalg_svd),
+        api!(np_linalg_inv = linalg::np_linalg_inv),
+        api!(np_linalg_pinv = linalg::np_linalg_pinv),
+        api!(np_linalg_matrix_power = linalg::np_linalg_matrix_power),
+        api!(np_linalg_det = linalg::np_linalg_det),
+        api!(sp_linalg_lu = linalg::sp_linalg_lu),
+        api!(sp_linalg_schur = linalg::sp_linalg_schur),
+        api!(sp_linalg_hessenberg = linalg::sp_linalg_hessenberg),
+
+        /*
+         * syscall for unit tests
+         * Used in `artiq.tests.coredevice.test_exceptions.ExceptionTest.test_raise_exceptions_kernel`
+         * This syscall checks that the exception IDs used in the Python `EmbeddingMap` (in `artiq.language.embedding`)
+         * match the `EXCEPTION_ID_LOOKUP` defined in the firmware (`libksupport::src::eh_artiq`)
+         */
+        api!(test_exception_id_sync = eh_artiq::test_exception_id_sync)
     ];
     api.iter()
         .find(|&&(exported, _)| exported.as_bytes() == required)

src/libksupport/src/kernel/dma.rs

@@ -170,6 +170,7 @@ pub extern "C" fn dma_playback(timestamp: i64, ptr: i32, _uses_ddma: bool) {
         csr::rtio_dma::base_address_write(ptr as u32);
         csr::rtio_dma::time_offset_write(timestamp as u64);
 
+        let old_cri_master = csr::cri_con::selected_read();
         csr::cri_con::selected_write(1);
         csr::rtio_dma::enable_write(1);
         #[cfg(has_drtio)]
@@ -183,7 +184,7 @@ pub extern "C" fn dma_playback(timestamp: i64, ptr: i32, _uses_ddma: bool) {
                 });
         }
         while csr::rtio_dma::enable_read() != 0 {}
-        csr::cri_con::selected_write(0);
+        csr::cri_con::selected_write(old_cri_master);
 
         let error = csr::rtio_dma::error_read();
         if error != 0 {

src/libksupport/src/kernel/linalg.rs

@@ -0,0 +1,440 @@
+// Uses `nalgebra` crate to invoke `np_linalg` and `sp_linalg` functions
+// When converting between `nalgebra::Matrix` and `NDArray` following considerations are necessary
+//
+// * Both `nalgebra::Matrix` and `NDArray` require their content to be stored in row-major order
+// * `NDArray` data pointer can be directly read and converted to `nalgebra::Matrix` (row and column number must be known)
+// * `nalgebra::Matrix::as_slice` returns the content of matrix in column-major order and initial data needs to be transposed before storing it in `NDArray` data pointer
+
+use alloc::vec::Vec;
+use core::slice;
+
+use nalgebra::DMatrix;
+
+use crate::artiq_raise;
+
+pub struct InputMatrix {
+    pub ndims: usize,
+    pub dims: *const usize,
+    pub data: *mut f64,
+}
+
+impl InputMatrix {
+    fn get_dims(&mut self) -> Vec<usize> {
+        let dims = unsafe { slice::from_raw_parts(self.dims, self.ndims) };
+        dims.to_vec()
+    }
+}
+
+/// # Safety
+///
+/// `mat1` should point to a valid 2DArray of `f64` floats in row-major order
+#[no_mangle]
+pub unsafe extern "C" fn np_linalg_cholesky(mat1: *mut InputMatrix, out: *mut InputMatrix) {
+    let mat1 = mat1.as_mut().unwrap();
+    let out = out.as_mut().unwrap();
+
+    if mat1.ndims != 2 {
+        artiq_raise!(
+            "ValueError",
+            "expected 2D Vector Input, but received {1}D input)",
+            0,
+            mat1.ndims as i64,
+            0
+        );
+    }
+
+    let dim1 = (*mat1).get_dims();
+    if dim1[0] != dim1[1] {
+        artiq_raise!(
+            "ValueError",
+            "last 2 dimensions of the array must be square: {1} != {2}",
+            0,
+            dim1[0] as i64,
+            dim1[1] as i64
+        );
+    }
+
+    let outdim = out.get_dims();
+    let out_slice = slice::from_raw_parts_mut(out.data, outdim[0] * outdim[1]);
+    let data_slice1 = slice::from_raw_parts_mut(mat1.data, dim1[0] * dim1[1]);
+
+    let matrix1 = DMatrix::from_row_slice(dim1[0], dim1[1], data_slice1);
+    let result = matrix1.cholesky();
+    match result {
+        Some(res) => {
+            out_slice.copy_from_slice(res.unpack().transpose().as_slice());
+        }
+        None => {
+            artiq_raise!("LinAlgError", "Matrix is not positive definite");
+        }
+    };
+}
+
+/// # Safety
+///
+/// `mat1` should point to a valid 2DArray of `f64` floats in row-major order
+#[no_mangle]
+pub unsafe extern "C" fn np_linalg_qr(mat1: *mut InputMatrix, out_q: *mut InputMatrix, out_r: *mut InputMatrix) {
+    let mat1 = mat1.as_mut().unwrap();
+    let out_q = out_q.as_mut().unwrap();
+    let out_r = out_r.as_mut().unwrap();
+
+    if mat1.ndims != 2 {
+        artiq_raise!(
+            "ValueError",
+            "expected 2D Vector Input, but received {1}D input)",
+            0,
+            mat1.ndims as i64,
+            0
+        );
+    }
+
+    let dim1 = (*mat1).get_dims();
+    let outq_dim = (*out_q).get_dims();
+    let outr_dim = (*out_r).get_dims();
+
+    let data_slice1 = slice::from_raw_parts_mut(mat1.data, dim1[0] * dim1[1]);
+    let out_q_slice = slice::from_raw_parts_mut(out_q.data, outq_dim[0] * outq_dim[1]);
+    let out_r_slice = slice::from_raw_parts_mut(out_r.data, outr_dim[0] * outr_dim[1]);
+
+    // Refer to https://github.com/dimforge/nalgebra/issues/735
+    let matrix1 = DMatrix::from_row_slice(dim1[0], dim1[1], data_slice1);
+
+    let res = matrix1.qr();
+    let (q, r) = res.unpack();
+
+    // Uses different algo need to match numpy
+    out_q_slice.copy_from_slice(q.transpose().as_slice());
+    out_r_slice.copy_from_slice(r.transpose().as_slice());
+}
+
+/// # Safety
+///
+/// `mat1` should point to a valid 2DArray of `f64` floats in row-major order
+#[no_mangle]
+pub unsafe extern "C" fn np_linalg_svd(
+    mat1: *mut InputMatrix,
+    outu: *mut InputMatrix,
+    outs: *mut InputMatrix,
+    outvh: *mut InputMatrix,
+) {
+    let mat1 = mat1.as_mut().unwrap();
+    let outu = outu.as_mut().unwrap();
+    let outs = outs.as_mut().unwrap();
+    let outvh = outvh.as_mut().unwrap();
+
+    if mat1.ndims != 2 {
+        artiq_raise!(
+            "ValueError",
+            "expected 2D Vector Input, but received {1}D input)",
+            0,
+            mat1.ndims as i64,
+            0
+        );
+    }
+
+    let dim1 = (*mat1).get_dims();
+    let outu_dim = (*outu).get_dims();
+    let outs_dim = (*outs).get_dims();
+    let outvh_dim = (*outvh).get_dims();
+
+    let data_slice1 = slice::from_raw_parts_mut(mat1.data, dim1[0] * dim1[1]);
+    let out_u_slice = slice::from_raw_parts_mut(outu.data, outu_dim[0] * outu_dim[1]);
+    let out_s_slice = slice::from_raw_parts_mut(outs.data, outs_dim[0]);
+    let out_vh_slice = slice::from_raw_parts_mut(outvh.data, outvh_dim[0] * outvh_dim[1]);
+
+    let matrix = DMatrix::from_row_slice(dim1[0], dim1[1], data_slice1);
+    let result = matrix.svd(true, true);
+    out_u_slice.copy_from_slice(result.u.unwrap().transpose().as_slice());
+    out_s_slice.copy_from_slice(result.singular_values.as_slice());
+    out_vh_slice.copy_from_slice(result.v_t.unwrap().transpose().as_slice());
+}
+
+/// # Safety
+///
+/// `mat1` should point to a valid 2DArray of `f64` floats in row-major order
+#[no_mangle]
+pub unsafe extern "C" fn np_linalg_inv(mat1: *mut InputMatrix, out: *mut InputMatrix) {
+    let mat1 = mat1.as_mut().unwrap();
+    let out = out.as_mut().unwrap();
+
+    if mat1.ndims != 2 {
+        artiq_raise!(
+            "ValueError",
+            "expected 2D Vector Input, but received {1}D input)",
+            0,
+            mat1.ndims as i64,
+            0
+        );
+    }
+    let dim1 = (*mat1).get_dims();
+
+    if dim1[0] != dim1[1] {
+        artiq_raise!(
+            "ValueError",
+            "last 2 dimensions of the array must be square: {1} != {2}",
+            0,
+            dim1[0] as i64,
+            dim1[1] as i64
+        );
+    }
+
+    let outdim = out.get_dims();
+    let out_slice = slice::from_raw_parts_mut(out.data, outdim[0] * outdim[1]);
+    let data_slice1 = slice::from_raw_parts_mut(mat1.data, dim1[0] * dim1[1]);
+
+    let matrix = DMatrix::from_row_slice(dim1[0], dim1[1], data_slice1);
+    if !matrix.is_invertible() {
+        artiq_raise!("LinAlgError", "no inverse for Singular Matrix");
+    }
+    let inv = matrix.try_inverse().unwrap();
+    out_slice.copy_from_slice(inv.transpose().as_slice());
+}
+
+/// # Safety
+///
+/// `mat1` should point to a valid 2DArray of `f64` floats in row-major order
+#[no_mangle]
+pub unsafe extern "C" fn np_linalg_pinv(mat1: *mut InputMatrix, out: *mut InputMatrix) {
+    let mat1 = mat1.as_mut().unwrap();
+    let out = out.as_mut().unwrap();
+
+    if mat1.ndims != 2 {
+        artiq_raise!(
+            "ValueError",
+            "expected 2D Vector Input, but received {1}D input)",
+            0,
+            mat1.ndims as i64,
+            0
+        );
+    }
+    let dim1 = (*mat1).get_dims();
+    let outdim = out.get_dims();
+    let out_slice = slice::from_raw_parts_mut(out.data, outdim[0] * outdim[1]);
+    let data_slice1 = slice::from_raw_parts_mut(mat1.data, dim1[0] * dim1[1]);
+
+    let matrix = DMatrix::from_row_slice(dim1[0], dim1[1], data_slice1);
+    let svd = matrix.svd(true, true);
+    let inv = svd.pseudo_inverse(1e-15);
+
+    match inv {
+        Ok(m) => {
+            out_slice.copy_from_slice(m.transpose().as_slice());
+        }
+        Err(_) => {
+            artiq_raise!("LinAlgError", "SVD computation does not converge");
+        }
+    }
+}
+
+/// # Safety
+///
+/// `mat1` should point to a valid 2DArray of `f64` floats in row-major order
+#[no_mangle]
+pub unsafe extern "C" fn np_linalg_matrix_power(mat1: *mut InputMatrix, mat2: *mut InputMatrix, out: *mut InputMatrix) {
+    let mat1 = mat1.as_mut().unwrap();
+    let mat2 = mat2.as_mut().unwrap();
+    let out = out.as_mut().unwrap();
+
+    if mat1.ndims != 2 {
+        artiq_raise!(
+            "ValueError",
+            "expected 2D Vector Input, but received {1}D input)",
+            0,
+            mat1.ndims as i64,
+            0
+        );
+    }
+
+    let dim1 = (*mat1).get_dims();
+    let power = slice::from_raw_parts_mut(mat2.data, 1);
+    let power = power[0];
+    let outdim = out.get_dims();
+    let out_slice = slice::from_raw_parts_mut(out.data, outdim[0] * outdim[1]);
+    let data_slice1 = slice::from_raw_parts_mut(mat1.data, dim1[0] * dim1[1]);
+    let mut abs_power = power;
+    if abs_power < 0.0 {
+        abs_power = abs_power * -1.0;
+    }
+    let matrix1 = DMatrix::from_row_slice(dim1[0], dim1[1], data_slice1);
+    if !matrix1.is_square() {
+        artiq_raise!(
+            "ValueError",
+            "last 2 dimensions of the array must be square: {1} != {2}",
+            0,
+            dim1[0] as i64,
+            dim1[1] as i64
+        );
+    }
+    let mut result = matrix1.pow(abs_power as u32);
+
+    if power < 0.0 {
+        if !matrix1.is_invertible() {
+            artiq_raise!("LinAlgError", "no inverse for Singular Matrix");
+        }
+        result = result.try_inverse().unwrap();
+    }
+    out_slice.copy_from_slice(result.transpose().as_slice());
+}
+
+/// # Safety
+///
+/// `mat1` should point to a valid 2DArray of `f64` floats in row-major order
+#[no_mangle]
+pub unsafe extern "C" fn np_linalg_det(mat1: *mut InputMatrix, out: *mut InputMatrix) {
+    let mat1 = mat1.as_mut().unwrap();
+    let out = out.as_mut().unwrap();
+
+    if mat1.ndims != 2 {
+        artiq_raise!(
+            "ValueError",
+            "expected 2D Vector Input, but received {1}D input)",
+            0,
+            mat1.ndims as i64,
+            0
+        );
+    }
+    let dim1 = (*mat1).get_dims();
+    let out_slice = slice::from_raw_parts_mut(out.data, 1);
+    let data_slice1 = slice::from_raw_parts_mut(mat1.data, dim1[0] * dim1[1]);
+
+    let matrix = DMatrix::from_row_slice(dim1[0], dim1[1], data_slice1);
+    if !matrix.is_square() {
+        artiq_raise!(
+            "ValueError",
+            "last 2 dimensions of the array must be square: {1} != {2}",
+            0,
+            dim1[0] as i64,
+            dim1[1] as i64
+        );
+    }
+    out_slice[0] = matrix.determinant();
+}
+
+/// # Safety
+///
+/// `mat1` should point to a valid 2DArray of `f64` floats in row-major order
+#[no_mangle]
+pub unsafe extern "C" fn sp_linalg_lu(mat1: *mut InputMatrix, out_l: *mut InputMatrix, out_u: *mut InputMatrix) {
+    let mat1 = mat1.as_mut().unwrap();
+    let out_l = out_l.as_mut().unwrap();
+    let out_u = out_u.as_mut().unwrap();
+
+    if mat1.ndims != 2 {
+        artiq_raise!(
+            "ValueError",
+            "expected 2D Vector Input, but received {1}D input)",
+            0,
+            mat1.ndims as i64,
+            0
+        );
+    }
+
+    let dim1 = (*mat1).get_dims();
+    let outl_dim = (*out_l).get_dims();
+    let outu_dim = (*out_u).get_dims();
+
+    let data_slice1 = slice::from_raw_parts_mut(mat1.data, dim1[0] * dim1[1]);
+    let out_l_slice = slice::from_raw_parts_mut(out_l.data, outl_dim[0] * outl_dim[1]);
+    let out_u_slice = slice::from_raw_parts_mut(out_u.data, outu_dim[0] * outu_dim[1]);
+
+    let matrix = DMatrix::from_row_slice(dim1[0], dim1[1], data_slice1);
+    let (_, l, u) = matrix.lu().unpack();
+
+    out_l_slice.copy_from_slice(l.transpose().as_slice());
+    out_u_slice.copy_from_slice(u.transpose().as_slice());
+}
+
+/// # Safety
+///
+/// `mat1` should point to a valid 2DArray of `f64` floats in row-major order
+#[no_mangle]
+pub unsafe extern "C" fn sp_linalg_schur(mat1: *mut InputMatrix, out_t: *mut InputMatrix, out_z: *mut InputMatrix) {
+    let mat1 = mat1.as_mut().unwrap();
+    let out_t = out_t.as_mut().unwrap();
+    let out_z = out_z.as_mut().unwrap();
+
+    if mat1.ndims != 2 {
+        artiq_raise!(
+            "ValueError",
+            "expected 2D Vector Input, but received {1}D input)",
+            0,
+            mat1.ndims as i64,
+            0
+        );
+    }
+
+    let dim1 = (*mat1).get_dims();
+
+    if dim1[0] != dim1[1] {
+        artiq_raise!(
+            "ValueError",
+            "last 2 dimensions of the array must be square: {1} != {2}",
+            0,
+            dim1[0] as i64,
+            dim1[1] as i64
+        );
+    }
+
+    let out_t_dim = (*out_t).get_dims();
+    let out_z_dim = (*out_z).get_dims();
+
+    let data_slice1 = slice::from_raw_parts_mut(mat1.data, dim1[0] * dim1[1]);
+    let out_t_slice = slice::from_raw_parts_mut(out_t.data, out_t_dim[0] * out_t_dim[1]);
+    let out_z_slice = slice::from_raw_parts_mut(out_z.data, out_z_dim[0] * out_z_dim[1]);
+
+    let matrix = DMatrix::from_row_slice(dim1[0], dim1[1], data_slice1);
+    let (z, t) = matrix.schur().unpack();
+
+    out_t_slice.copy_from_slice(t.transpose().as_slice());
+    out_z_slice.copy_from_slice(z.transpose().as_slice());
+}
+
+/// # Safety
+///
+/// `mat1` should point to a valid 2DArray of `f64` floats in row-major order
+#[no_mangle]
+pub unsafe extern "C" fn sp_linalg_hessenberg(
+    mat1: *mut InputMatrix,
+    out_h: *mut InputMatrix,
+    out_q: *mut InputMatrix,
+) {
+    let mat1 = mat1.as_mut().unwrap();
+    let out_h = out_h.as_mut().unwrap();
+    let out_q = out_q.as_mut().unwrap();
+
+    if mat1.ndims != 2 {
+        artiq_raise!(
+            "ValueError",
+            "expected 2D Vector Input, but received {1}D input)",
+            0,
+            mat1.ndims as i64,
+            0
+        );
+    }
+
+    let dim1 = (*mat1).get_dims();
+
+    if dim1[0] != dim1[1] {
+        artiq_raise!(
+            "ValueError",
+            "last 2 dimensions of the array must be square: {1} != {2}",
+            0,
+            dim1[0] as i64,
+            dim1[1] as i64
+        );
+    }
+
+    let out_h_dim = (*out_h).get_dims();
+    let out_q_dim = (*out_q).get_dims();
+
+    let data_slice1 = slice::from_raw_parts_mut(mat1.data, dim1[0] * dim1[1]);
+    let out_h_slice = slice::from_raw_parts_mut(out_h.data, out_h_dim[0] * out_h_dim[1]);
+    let out_q_slice = slice::from_raw_parts_mut(out_q.data, out_q_dim[0] * out_q_dim[1]);
+
+    let matrix = DMatrix::from_row_slice(dim1[0], dim1[1], data_slice1);
+    let (q, h) = matrix.hessenberg().unpack();
+
+    out_h_slice.copy_from_slice(h.transpose().as_slice());
+    out_q_slice.copy_from_slice(q.transpose().as_slice());
+}

src/libksupport/src/kernel/mod.rs

@@ -13,6 +13,7 @@ mod dma;
 mod rpc;
 pub use dma::DmaRecorder;
 mod cache;
+mod linalg;
 #[cfg(has_drtio)]
 mod subkernel;
 
@@ -23,6 +24,7 @@ pub enum SubkernelStatus {
     Timeout,
     IncorrectState,
     CommLost,
+    Exception(Vec<u8>),
     OtherError,
 }
 
@@ -77,7 +79,9 @@ pub enum Message {
     #[cfg(has_drtio)]
     SubkernelLoadRunRequest {
         id: u32,
+        destination: u8,
         run: bool,
+        timestamp: u64,
     },
     #[cfg(has_drtio)]
     SubkernelLoadRunReply {
@@ -86,30 +90,30 @@ pub enum Message {
     #[cfg(has_drtio)]
     SubkernelAwaitFinishRequest {
         id: u32,
-        timeout: u64,
+        timeout: i64,
     },
     #[cfg(has_drtio)]
-    SubkernelAwaitFinishReply {
-        status: SubkernelStatus,
-    },
+    SubkernelAwaitFinishReply,
     #[cfg(has_drtio)]
     SubkernelMsgSend {
         id: u32,
+        destination: Option<u8>,
         data: Vec<u8>,
     },
     #[cfg(has_drtio)]
     SubkernelMsgSent,
     #[cfg(has_drtio)]
     SubkernelMsgRecvRequest {
-        id: u32,
-        timeout: u64,
+        id: i32,
+        timeout: i64,
         tags: Vec<u8>,
     },
     #[cfg(has_drtio)]
     SubkernelMsgRecvReply {
-        status: SubkernelStatus,
         count: u8,
     },
+    #[cfg(has_drtio)]
+    SubkernelError(SubkernelStatus),
 }
 
 static CHANNEL_0TO1: Mutex<Option<sync_channel::Sender<'static, Message>>> = Mutex::new(None);

src/libksupport/src/kernel/subkernel.rs

@@ -3,14 +3,19 @@ use alloc::vec::Vec;
 use cslice::CSlice;
 
 use super::{Message, SubkernelStatus, KERNEL_CHANNEL_0TO1, KERNEL_CHANNEL_1TO0};
-use crate::{artiq_raise, rpc::send_args};
+use crate::{artiq_raise, eh_artiq, rpc::send_args, rtio::now_mu};
 
-pub extern "C" fn load_run(id: u32, run: bool) {
+pub extern "C" fn load_run(id: u32, destination: u8, run: bool) {
     unsafe {
         KERNEL_CHANNEL_1TO0
             .as_mut()
             .unwrap()
-            .send(Message::SubkernelLoadRunRequest { id: id, run: run });
+            .send(Message::SubkernelLoadRunRequest {
+                id: id,
+                destination: destination,
+                run: run,
+                timestamp: now_mu() as u64,
+            });
     }
     match unsafe { KERNEL_CHANNEL_0TO1.as_mut().unwrap() }.recv() {
         Message::SubkernelLoadRunReply { succeeded: true } => (),
@@ -21,7 +26,7 @@ pub extern "C" fn load_run(id: u32, run: bool) {
     }
 }
 
-pub extern "C" fn await_finish(id: u32, timeout: u64) {
+pub extern "C" fn await_finish(id: u32, timeout: i64) {
     unsafe {
         KERNEL_CHANNEL_1TO0
             .as_mut()
@@ -32,26 +37,30 @@ pub extern "C" fn await_finish(id: u32, timeout: u64) {
             });
     }
     match unsafe { KERNEL_CHANNEL_0TO1.as_mut().unwrap() }.recv() {
-        Message::SubkernelAwaitFinishReply {
-            status: SubkernelStatus::NoError,
-        } => (),
-        Message::SubkernelAwaitFinishReply {
-            status: SubkernelStatus::IncorrectState,
-        } => artiq_raise!("SubkernelError", "Subkernel not running"),
-        Message::SubkernelAwaitFinishReply {
-            status: SubkernelStatus::Timeout,
-        } => artiq_raise!("SubkernelError", "Subkernel timed out"),
-        Message::SubkernelAwaitFinishReply {
-            status: SubkernelStatus::CommLost,
-        } => artiq_raise!("SubkernelError", "Lost communication with satellite"),
-        Message::SubkernelAwaitFinishReply {
-            status: SubkernelStatus::OtherError,
-        } => artiq_raise!("SubkernelError", "An error occurred during subkernel operation"),
+        Message::SubkernelAwaitFinishReply => (),
+        Message::SubkernelError(SubkernelStatus::IncorrectState) => {
+            artiq_raise!("SubkernelError", "Subkernel not running")
+        }
+        Message::SubkernelError(SubkernelStatus::Timeout) => artiq_raise!("SubkernelError", "Subkernel timed out"),
+        Message::SubkernelError(SubkernelStatus::CommLost) => {
+            artiq_raise!("SubkernelError", "Lost communication with satellite")
+        }
+        Message::SubkernelError(SubkernelStatus::OtherError) => {
+            artiq_raise!("SubkernelError", "An error occurred during subkernel operation")
+        }
+        Message::SubkernelError(SubkernelStatus::Exception(raw_exception)) => eh_artiq::raise_raw(&raw_exception),
         _ => panic!("expected SubkernelAwaitFinishReply after SubkernelAwaitFinishRequest"),
     }
 }
 
-pub extern "C" fn send_message(id: u32, count: u8, tag: &CSlice<u8>, data: *const *const ()) {
+pub extern "C" fn send_message(
+    id: u32,
+    is_return: bool,
+    destination: u8,
+    count: u8,
+    tag: &CSlice<u8>,
+    data: *const *const (),
+) {
     let mut buffer = Vec::<u8>::new();
     send_args(&mut buffer, 0, tag.as_ref(), data, false).expect("RPC encoding failed");
     // overwrite service tag, include how many tags are in the message
@@ -59,6 +68,7 @@ pub extern "C" fn send_message(id: u32, count: u8, tag: &CSlice<u8>, data: *cons
     unsafe {
         KERNEL_CHANNEL_1TO0.as_mut().unwrap().send(Message::SubkernelMsgSend {
             id: id,
+            destination: if is_return { None } else { Some(destination) },
             data: buffer[3..].to_vec(),
         });
     }
@@ -68,7 +78,7 @@ pub extern "C" fn send_message(id: u32, count: u8, tag: &CSlice<u8>, data: *cons
     }
 }
 
-pub extern "C" fn await_message(id: u32, timeout: u64, tags: &CSlice<u8>, min: u8, max: u8) {
+pub extern "C" fn await_message(id: i32, timeout: i64, tags: &CSlice<u8>, min: u8, max: u8) {
     unsafe {
         KERNEL_CHANNEL_1TO0
             .as_mut()
@@ -80,30 +90,22 @@ pub extern "C" fn await_message(id: u32, timeout: u64, tags: &CSlice<u8>, min: u
             });
     }
     match unsafe { KERNEL_CHANNEL_0TO1.as_mut().unwrap() }.recv() {
-        Message::SubkernelMsgRecvReply {
-            status: SubkernelStatus::NoError,
-            count,
-        } => {
+        Message::SubkernelMsgRecvReply { count } => {
             if min > count || count > max {
                 artiq_raise!("SubkernelError", "Received more or less arguments than required")
             }
         }
-        Message::SubkernelMsgRecvReply {
-            status: SubkernelStatus::IncorrectState,
-            ..
-        } => artiq_raise!("SubkernelError", "Subkernel not running"),
-        Message::SubkernelMsgRecvReply {
-            status: SubkernelStatus::Timeout,
-            ..
-        } => artiq_raise!("SubkernelError", "Subkernel timed out"),
-        Message::SubkernelMsgRecvReply {
-            status: SubkernelStatus::CommLost,
-            ..
-        } => artiq_raise!("SubkernelError", "Lost communication with satellite"),
-        Message::SubkernelMsgRecvReply {
-            status: SubkernelStatus::OtherError,
-            ..
-        } => artiq_raise!("SubkernelError", "An error occurred during subkernel operation"),
+        Message::SubkernelError(SubkernelStatus::IncorrectState) => {
+            artiq_raise!("SubkernelError", "Subkernel not running")
+        }
+        Message::SubkernelError(SubkernelStatus::Timeout) => artiq_raise!("SubkernelError", "Subkernel timed out"),
+        Message::SubkernelError(SubkernelStatus::CommLost) => {
+            artiq_raise!("SubkernelError", "Lost communication with satellite")
+        }
+        Message::SubkernelError(SubkernelStatus::OtherError) => {
+            artiq_raise!("SubkernelError", "An error occurred during subkernel operation")
+        }
+        Message::SubkernelError(SubkernelStatus::Exception(raw_exception)) => eh_artiq::raise_raw(&raw_exception),
         _ => panic!("expected SubkernelMsgRecvReply after SubkernelMsgRecvRequest"),
     }
     // RpcRecvRequest should be called after this to receive message data

src/runtime/Cargo.toml.tpl

@@ -8,6 +8,7 @@ edition = "2018"
 [features]
 target_zc706 = ["libboard_zynq/target_zc706", "libsupport_zynq/target_zc706", "libconfig/target_zc706", "libboard_artiq/target_zc706"]
 target_kasli_soc = ["libboard_zynq/target_kasli_soc", "libsupport_zynq/target_kasli_soc", "libconfig/target_kasli_soc", "libboard_artiq/target_kasli_soc"]
+target_ebaz4205 = ["libboard_zynq/target_ebaz4205", "libsupport_zynq/target_ebaz4205", "libconfig/target_ebaz4205", "libboard_artiq/target_ebaz4205"]
 default = ["target_zc706"]
 
 [build-dependencies]
@@ -20,6 +21,7 @@ cslice = "0.3"
 log = "0.4"
 embedded-hal = "0.2"
 core_io = { version = "0.1", features = ["collections"] }
+crc = { version = "1.7", default-features = false }
 byteorder = { version = "1.3", default-features = false }
 void = { version = "1", default-features = false }
 futures = { version = "0.3", default-features = false, features = ["async-await"] }
@@ -41,3 +43,7 @@ libc = { path = "../libc" }
 io = { path = "../libio", features = ["alloc"] }
 ksupport = { path = "../libksupport" }
 libboard_artiq = { path = "../libboard_artiq" }
+
+[dependencies.tar-no-std]
+git = "https://git.m-labs.hk/M-Labs/tar-no-std"
+rev = "2ab6dc5"

src/runtime/src/analyzer.rs

@@ -60,7 +60,7 @@ pub mod remote_analyzer {
         routing_table: &drtio_routing::RoutingTable,
         up_destinations: &Rc<RefCell<[bool; drtio_routing::DEST_COUNT]>>,
         timer: GlobalTimer,
-    ) -> Result<RemoteBuffer, &'static str> {
+    ) -> Result<RemoteBuffer, drtio::Error> {
         // gets data from satellites and returns consolidated data
         let mut remote_data: Vec<u8> = Vec::new();
         let mut remote_error = false;

src/runtime/src/comms.rs

@@ -3,17 +3,22 @@ use core::{cell::RefCell, fmt, slice, str};
 
 use core_io::Error as IoError;
 use cslice::CSlice;
+use dyld::elf;
 use futures::{future::FutureExt, select_biased};
 #[cfg(has_drtio)]
 use io::Cursor;
 #[cfg(has_drtio)]
 use ksupport::rpc;
 use ksupport::{kernel, resolve_channel_name};
+#[cfg(has_drtio)]
+use libasync::delay;
 use libasync::{smoltcp::{Sockets, TcpStream},
                task};
 use libboard_artiq::drtio_routing;
 #[cfg(feature = "target_kasli_soc")]
 use libboard_zynq::error_led::ErrorLED;
+#[cfg(has_drtio)]
+use libboard_zynq::time::Milliseconds;
 use libboard_zynq::{self as zynq,
                     smoltcp::{self,
                               iface::{EthernetInterfaceBuilder, NeighborCache},
@@ -27,6 +32,8 @@ use libcortex_a9::{mutex::Mutex,
 use log::{error, info, warn};
 use num_derive::{FromPrimitive, ToPrimitive};
 use num_traits::{FromPrimitive, ToPrimitive};
+#[cfg(has_drtio)]
+use tar_no_std::TarArchiveRef;
 
 #[cfg(has_drtio)]
 use crate::pl;
@@ -43,6 +50,8 @@ pub enum Error {
     BufferExhausted,
     #[cfg(has_drtio)]
     SubkernelError(subkernel::Error),
+    #[cfg(has_drtio)]
+    DestinationDown,
 }
 
 pub type Result<T> = core::result::Result<T, Error>;
@@ -57,6 +66,8 @@ impl fmt::Display for Error {
             Error::BufferExhausted => write!(f, "buffer exhausted"),
             #[cfg(has_drtio)]
             Error::SubkernelError(error) => write!(f, "subkernel error: {:?}", error),
+            #[cfg(has_drtio)]
+            Error::DestinationDown => write!(f, "subkernel destination down"),
         }
     }
 }
@@ -390,8 +401,13 @@ async fn handle_run_kernel(
                 control.borrow_mut().tx.async_send(reply).await;
             }
             #[cfg(has_drtio)]
-            kernel::Message::SubkernelLoadRunRequest { id, run } => {
-                let succeeded = match subkernel::load(aux_mutex, routing_table, timer, id, run).await {
+            kernel::Message::SubkernelLoadRunRequest {
+                id,
+                destination: _,
+                run,
+                timestamp,
+            } => {
+                let succeeded = match subkernel::load(aux_mutex, routing_table, timer, id, run, timestamp).await {
                     Ok(()) => true,
                     Err(e) => {
                         error!("Error loading subkernel: {:?}", e);
@@ -407,37 +423,28 @@ async fn handle_run_kernel(
             #[cfg(has_drtio)]
             kernel::Message::SubkernelAwaitFinishRequest { id, timeout } => {
                 let res = subkernel::await_finish(aux_mutex, routing_table, timer, id, timeout).await;
-                let status = match res {
-                    Ok(ref res) => {
+                let response = match res {
+                    Ok(res) => {
                         if res.status == subkernel::FinishStatus::CommLost {
-                            kernel::SubkernelStatus::CommLost
-                        } else if let Some(exception) = &res.exception {
-                            error!("Exception in subkernel");
-                            match stream {
-                                None => (),
-                                Some(stream) => {
-                                    write_chunk(stream, exception).await?;
-                                }
-                            }
-                            // will not be called after exception is served
-                            kernel::SubkernelStatus::OtherError
+                            kernel::Message::SubkernelError(kernel::SubkernelStatus::CommLost)
+                        } else if let Some(exception) = res.exception {
+                            kernel::Message::SubkernelError(kernel::SubkernelStatus::Exception(exception))
                         } else {
-                            kernel::SubkernelStatus::NoError
+                            kernel::Message::SubkernelAwaitFinishReply
                         }
                     }
-                    Err(SubkernelError::Timeout) => kernel::SubkernelStatus::Timeout,
-                    Err(SubkernelError::IncorrectState) => kernel::SubkernelStatus::IncorrectState,
-                    Err(_) => kernel::SubkernelStatus::OtherError,
+                    Err(SubkernelError::Timeout) => kernel::Message::SubkernelError(kernel::SubkernelStatus::Timeout),
+                    Err(SubkernelError::IncorrectState) => {
+                        kernel::Message::SubkernelError(kernel::SubkernelStatus::IncorrectState)
+                    }
+                    Err(_) => kernel::Message::SubkernelError(kernel::SubkernelStatus::OtherError),
                 };
-                control
-                    .borrow_mut()
-                    .tx
-                    .async_send(kernel::Message::SubkernelAwaitFinishReply { status: status })
-                    .await;
+                control.borrow_mut().tx.async_send(response).await;
             }
             #[cfg(has_drtio)]
-            kernel::Message::SubkernelMsgSend { id, data } => {
-                let res = subkernel::message_send(aux_mutex, routing_table, timer, id, data).await;
+            kernel::Message::SubkernelMsgSend { id, destination, data } => {
+                let res =
+                    subkernel::message_send(aux_mutex, routing_table, timer, id, destination.unwrap(), data).await;
                 match res {
                     Ok(_) => (),
                     Err(e) => {
@@ -452,22 +459,24 @@ async fn handle_run_kernel(
             }
             #[cfg(has_drtio)]
             kernel::Message::SubkernelMsgRecvRequest { id, timeout, tags } => {
-                let message_received = subkernel::message_await(id, timeout, timer).await;
-                let (status, count) = match message_received {
-                    Ok(ref message) => (kernel::SubkernelStatus::NoError, message.count),
-                    Err(SubkernelError::Timeout) => (kernel::SubkernelStatus::Timeout, 0),
-                    Err(SubkernelError::IncorrectState) => (kernel::SubkernelStatus::IncorrectState, 0),
-                    Err(SubkernelError::CommLost) => (kernel::SubkernelStatus::CommLost, 0),
-                    Err(_) => (kernel::SubkernelStatus::OtherError, 0),
+                let message_received = subkernel::message_await(id as u32, timeout, timer).await;
+                let response = match message_received {
+                    Ok(ref message) => kernel::Message::SubkernelMsgRecvReply { count: message.count },
+                    Err(SubkernelError::Timeout) => kernel::Message::SubkernelError(kernel::SubkernelStatus::Timeout),
+                    Err(SubkernelError::IncorrectState) => {
+                        kernel::Message::SubkernelError(kernel::SubkernelStatus::IncorrectState)
+                    }
+                    Err(SubkernelError::CommLost) => kernel::Message::SubkernelError(kernel::SubkernelStatus::CommLost),
+                    Err(SubkernelError::SubkernelException) => {
+                        // just retrieve the exception
+                        let status = subkernel::await_finish(aux_mutex, routing_table, timer, id as u32, timeout)
+                            .await
+                            .unwrap();
+                        kernel::Message::SubkernelError(kernel::SubkernelStatus::Exception(status.exception.unwrap()))
+                    }
+                    Err(_) => kernel::Message::SubkernelError(kernel::SubkernelStatus::OtherError),
                 };
-                control
-                    .borrow_mut()
-                    .tx
-                    .async_send(kernel::Message::SubkernelMsgRecvReply {
-                        status: status,
-                        count: count,
-                    })
-                    .await;
+                control.borrow_mut().tx.async_send(response).await;
                 if let Ok(message) = message_received {
                     // receive code almost identical to RPC recv, except we are not reading from a stream
                     let mut reader = Cursor::new(message.data);
@@ -499,7 +508,7 @@ async fn handle_run_kernel(
                             .async_send(kernel::Message::RpcRecvReply(Ok(0)))
                             .await;
                         i += 1;
-                        if i < count {
+                        if i < message.count {
                             current_tags = remaining_tags;
                         } else {
                             break;
@@ -524,6 +533,56 @@ async fn handle_run_kernel(
     Ok(())
 }
 
+async fn handle_flash_kernel(
+    buffer: &Vec<u8>,
+    control: &Rc<RefCell<kernel::Control>>,
+    _up_destinations: &Rc<RefCell<[bool; drtio_routing::DEST_COUNT]>>,
+    _aux_mutex: &Rc<Mutex<bool>>,
+    _routing_table: &drtio_routing::RoutingTable,
+    _timer: GlobalTimer,
+) -> Result<()> {
+    if buffer[0] == elf::ELFMAG0 && buffer[1] == elf::ELFMAG1 && buffer[2] == elf::ELFMAG2 && buffer[3] == elf::ELFMAG3
+    {
+        // assume ELF file, proceed as before
+        load_kernel(buffer, control, None).await
+    } else {
+        #[cfg(has_drtio)]
+        {
+            let archive = TarArchiveRef::new(buffer.as_ref());
+            let entries = archive.entries();
+            let mut main_lib: Vec<u8> = Vec::new();
+            for entry in entries {
+                if entry.filename().as_str() == "main.elf" {
+                    main_lib = entry.data().to_vec();
+                } else {
+                    // subkernel filename must be in format:
+                    // "<subkernel id> <destination>.elf"
+                    let filename = entry.filename();
+                    let mut iter = filename.as_str().split_whitespace();
+                    let sid: u32 = iter.next().unwrap().parse().unwrap();
+                    let dest: u8 = iter.next().unwrap().strip_suffix(".elf").unwrap().parse().unwrap();
+                    let up = _up_destinations.borrow()[dest as usize];
+                    if up {
+                        let subkernel_lib = entry.data().to_vec();
+                        subkernel::add_subkernel(sid, dest, subkernel_lib).await;
+                        match subkernel::upload(_aux_mutex, _routing_table, _timer, sid).await {
+                            Ok(_) => (),
+                            Err(_) => return Err(Error::UnexpectedPattern),
+                        }
+                    } else {
+                        return Err(Error::DestinationDown);
+                    }
+                }
+            }
+            load_kernel(&main_lib, control, None).await
+        }
+        #[cfg(not(has_drtio))]
+        {
+            panic!("multi-kernel libraries are not supported in standalone systems");
+        }
+    }
+}
+
 async fn load_kernel(
     buffer: &Vec<u8>,
     control: &Rc<RefCell<kernel::Control>>,
@@ -679,7 +738,6 @@ pub fn main(timer: GlobalTimer, cfg: Config) {
 
     Sockets::init(32);
 
-    // before, mutex was on io, but now that io isn't used...?
     let aux_mutex: Rc<Mutex<bool>> = Rc::new(Mutex::new(false));
     #[cfg(has_drtio)]
     let drtio_routing_table = Rc::new(RefCell::new(drtio_routing::config_routing_table(
@@ -692,19 +750,25 @@ pub fn main(timer: GlobalTimer, cfg: Config) {
     #[cfg(has_drtio_routing)]
     drtio_routing::interconnect_disable_all();
 
-    rtio_mgt::startup(&aux_mutex, &drtio_routing_table, &up_destinations, timer);
+    rtio_mgt::startup(&aux_mutex, &drtio_routing_table, &up_destinations, &cfg, timer);
     ksupport::setup_device_map(&cfg);
 
     analyzer::start(&aux_mutex, &drtio_routing_table, &up_destinations, timer);
     moninj::start(timer, &aux_mutex, &drtio_routing_table);
 
     let control: Rc<RefCell<kernel::Control>> = Rc::new(RefCell::new(kernel::Control::start()));
-    let idle_kernel = Rc::new(cfg.read("idle_kernel").ok());
     if let Ok(buffer) = cfg.read("startup_kernel") {
         info!("Loading startup kernel...");
-        if let Ok(()) = task::block_on(load_kernel(&buffer, &control, None)) {
+        let routing_table = drtio_routing_table.borrow();
+        if let Ok(()) = task::block_on(handle_flash_kernel(
+            &buffer,
+            &control,
+            &up_destinations,
+            &aux_mutex,
+            &routing_table,
+            timer,
+        )) {
             info!("Starting startup kernel...");
-            let routing_table = drtio_routing_table.borrow();
             let _ = task::block_on(handle_run_kernel(
                 None,
                 &control,
@@ -719,13 +783,34 @@ pub fn main(timer: GlobalTimer, cfg: Config) {
         }
     }
 
-    mgmt::start(cfg);
+    let cfg = Rc::new(cfg);
+    let restart_idle = Rc::new(Semaphore::new(1, 1));
+    mgmt::start(
+        cfg.clone(),
+        restart_idle.clone(),
+        Some(mgmt::DrtioContext(
+            aux_mutex.clone(),
+            drtio_routing_table.clone(),
+            timer,
+        )),
+    );
 
     task::spawn(async move {
         let connection = Rc::new(Semaphore::new(1, 1));
         let terminate = Rc::new(Semaphore::new(0, 1));
+        let can_restart_idle = Rc::new(Semaphore::new(1, 1));
+        let restart_idle = restart_idle.clone();
         loop {
-            let mut stream = TcpStream::accept(1381, 0x10_000, 0x10_000).await.unwrap();
+            let control = control.clone();
+            let mut maybe_stream = select_biased! {
+                s = (async {
+                        TcpStream::accept(1381, 0x10_000, 0x10_000).await.unwrap()
+                    }).fuse() => Some(s),
+                _ = (async {
+                        restart_idle.async_wait().await;
+                        can_restart_idle.async_wait().await;
+                    }).fuse() => None
+            };
 
             if connection.try_wait().is_none() {
                 // there is an existing connection
@@ -733,38 +818,58 @@ pub fn main(timer: GlobalTimer, cfg: Config) {
                 connection.async_wait().await;
             }
 
+            let maybe_idle_kernel = cfg.read("idle_kernel").ok();
+            if maybe_idle_kernel.is_none() && maybe_stream.is_none() {
+                control.borrow_mut().restart(); // terminate idle kernel if running
+            }
+
             let control = control.clone();
-            let idle_kernel = idle_kernel.clone();
             let connection = connection.clone();
             let terminate = terminate.clone();
+            let can_restart_idle = can_restart_idle.clone();
             let up_destinations = up_destinations.clone();
             let aux_mutex = aux_mutex.clone();
             let routing_table = drtio_routing_table.clone();
 
             // we make sure the value of terminate is 0 before we start
             let _ = terminate.try_wait();
+            let _ = can_restart_idle.try_wait();
             task::spawn(async move {
                 let routing_table = routing_table.borrow();
                 select_biased! {
                     _ = (async {
-                        let _ = handle_connection(&mut stream, control.clone(), &up_destinations, &aux_mutex, &routing_table, timer)
-                            .await
-                            .map_err(|e| warn!("connection terminated: {}", e));
-                        if let Some(buffer) = &*idle_kernel {
-                            info!("Loading idle kernel");
-                            let _ = load_kernel(&buffer, &control, None)
-                                .await.map_err(|_| warn!("error loading idle kernel"));
-                            info!("Running idle kernel");
-                            let _ = handle_run_kernel(None, &control, &up_destinations, &aux_mutex, &routing_table, timer)
-                                .await.map_err(|_| warn!("error running idle kernel"));
-                            info!("Idle kernel terminated");
+                        if let Some(stream) = &mut maybe_stream {
+                            let _ = handle_connection(stream, control.clone(), &up_destinations, &aux_mutex, &routing_table, timer)
+                                .await
+                                .map_err(|e| warn!("connection terminated: {}", e));
+                        }
+                        can_restart_idle.signal();
+                        match maybe_idle_kernel {
+                            Some(buffer) => {
+                                loop {
+                                    info!("loading idle kernel");
+                                    match handle_flash_kernel(&buffer, &control, &up_destinations, &aux_mutex, &routing_table, timer).await {
+                                        Ok(_) => {
+                                            info!("running idle kernel");
+                                            match handle_run_kernel(None, &control, &up_destinations, &aux_mutex, &routing_table, timer).await {
+                                                Ok(_) => info!("idle kernel finished"),
+                                                Err(_) => warn!("idle kernel running error")
+                                            }
+                                        },
+                                        Err(_) => warn!("idle kernel loading error")
+                                    }
+                                }
+                            },
+                            None => info!("no idle kernel found")
                         }
                     }).fuse() => (),
                     _ = terminate.async_wait().fuse() => ()
                 }
                 connection.signal();
-                let _ = stream.flush().await;
-                let _ = stream.abort().await;
+                if let Some(stream) = maybe_stream {
+                    let _ = stream.flush().await;
+                    let _ = stream.abort().await;
+                }
             });
         }
     });
@@ -813,7 +918,8 @@ pub fn soft_panic_main(timer: GlobalTimer, cfg: Config) -> ! {
 
     Sockets::init(32);
 
-    mgmt::start(cfg);
+    let dummy = Rc::new(Semaphore::new(0, 1));
+    mgmt::start(Rc::new(cfg), dummy, None);
 
     // getting eth settings disables the LED as it resets GPIO
     // need to re-enable it here

src/runtime/src/main.rs

@@ -8,7 +8,7 @@
 #[macro_use]
 extern crate alloc;
 
-#[cfg(feature = "target_kasli_soc")]
+#[cfg(all(feature = "target_kasli_soc", has_virtual_leds))]
 use core::cell::RefCell;
 
 use ksupport;
@@ -21,7 +21,7 @@ use libboard_artiq::{identifier_read, logger, pl};
 use libboard_zynq::{gic, mpcore, timer::GlobalTimer};
 use libconfig::Config;
 use libcortex_a9::l2c::enable_l2_cache;
-use libsupport_zynq::ram;
+use libsupport_zynq::{exception_vectors, ram};
 use log::{info, warn};
 
 mod analyzer;
@@ -38,7 +38,12 @@ mod rtio_mgt;
 #[cfg(has_drtio)]
 mod subkernel;
 
-#[cfg(feature = "target_kasli_soc")]
+// linker symbols
+extern "C" {
+    static __exceptions_start: u32;
+}
+
+#[cfg(all(feature = "target_kasli_soc", has_virtual_leds))]
 async fn io_expanders_service(
     i2c_bus: RefCell<&mut libboard_zynq::i2c::I2c>,
     io_expander0: RefCell<io_expander::IoExpander>,
@@ -77,6 +82,9 @@ static mut LOG_BUFFER: [u8; 1 << 17] = [0; 1 << 17];
 
 #[no_mangle]
 pub fn main_core0() {
+    unsafe {
+        exception_vectors::set_vector_table(&__exceptions_start as *const u32 as u32);
+    }
     enable_l2_cache(0x8);
     let mut timer = GlobalTimer::start();
 
@@ -94,20 +102,21 @@ pub fn main_core0() {
 
     ksupport::i2c::init();
     #[cfg(feature = "target_kasli_soc")]
-    let i2c_bus = unsafe { (ksupport::i2c::I2C_BUS).as_mut().unwrap() };
-
-    #[cfg(feature = "target_kasli_soc")]
-    let (mut io_expander0, mut io_expander1);
-    #[cfg(feature = "target_kasli_soc")]
     {
-        io_expander0 = io_expander::IoExpander::new(i2c_bus, 0).unwrap();
-        io_expander1 = io_expander::IoExpander::new(i2c_bus, 1).unwrap();
+        let i2c_bus = unsafe { (ksupport::i2c::I2C_BUS).as_mut().unwrap() };
+        let mut io_expander0 = io_expander::IoExpander::new(i2c_bus, 0).unwrap();
+        let mut io_expander1 = io_expander::IoExpander::new(i2c_bus, 1).unwrap();
         io_expander0
             .init(i2c_bus)
             .expect("I2C I/O expander #0 initialization failed");
         io_expander1
             .init(i2c_bus)
             .expect("I2C I/O expander #1 initialization failed");
+
+        // Drive CLK_SEL to true
+        #[cfg(has_si549)]
+        io_expander0.set(1, 7, true);
+
         // Drive TX_DISABLE to false on SFP0..3
         io_expander0.set(0, 1, false);
         io_expander1.set(0, 1, false);
@@ -115,6 +124,12 @@ pub fn main_core0() {
         io_expander1.set(1, 1, false);
         io_expander0.service(i2c_bus).unwrap();
         io_expander1.service(i2c_bus).unwrap();
+        #[cfg(has_virtual_leds)]
+        task::spawn(io_expanders_service(
+            RefCell::new(i2c_bus),
+            RefCell::new(io_expander0),
+            RefCell::new(io_expander1),
+        ));
     }
 
     let cfg = match Config::new() {
@@ -135,11 +150,5 @@ pub fn main_core0() {
 
     task::spawn(ksupport::report_async_rtio_errors());
 
-    #[cfg(feature = "target_kasli_soc")]
-    task::spawn(io_expanders_service(
-        RefCell::new(i2c_bus),
-        RefCell::new(io_expander0),
-        RefCell::new(io_expander1),
-    ));
     comms::main(timer, cfg);
 }

src/runtime/src/moninj.rs

@@ -58,10 +58,11 @@ mod remote_moninj {
     use log::error;
 
     use super::*;
-    use crate::rtio_mgt::drtio;
+    use crate::rtio_mgt::{drtio, drtio::Error as DrtioError};
 
     pub async fn read_probe(
         aux_mutex: &Rc<Mutex<bool>>,
+        routing_table: &drtio_routing::RoutingTable,
         timer: GlobalTimer,
         linkno: u8,
         destination: u8,
@@ -71,6 +72,7 @@ mod remote_moninj {
         let reply = drtio::aux_transact(
             aux_mutex,
             linkno,
+            routing_table,
             &drtioaux_async::Packet::MonitorRequest {
                 destination: destination,
                 channel: channel as _,
@@ -82,8 +84,8 @@ mod remote_moninj {
         match reply {
             Ok(drtioaux_async::Packet::MonitorReply { value }) => return value as i64,
             Ok(packet) => error!("received unexpected aux packet: {:?}", packet),
-            Err("link went down") => {
-                debug!("link is down");
+            Err(DrtioError::LinkDown) => {
+                warn!("link is down");
             }
             Err(e) => error!("aux packet error ({})", e),
         }
@@ -92,6 +94,7 @@ mod remote_moninj {
 
     pub async fn inject(
         aux_mutex: &Rc<Mutex<bool>>,
+        _routing_table: &drtio_routing::RoutingTable,
         _timer: GlobalTimer,
         linkno: u8,
         destination: u8,
@@ -99,7 +102,7 @@ mod remote_moninj {
         overrd: i8,
         value: i8,
     ) {
-        let _lock = aux_mutex.lock();
+        let _lock = aux_mutex.async_lock().await;
         drtioaux_async::send(
             linkno,
             &drtioaux_async::Packet::InjectionRequest {
@@ -115,6 +118,7 @@ mod remote_moninj {
 
     pub async fn read_injection_status(
         aux_mutex: &Rc<Mutex<bool>>,
+        routing_table: &drtio_routing::RoutingTable,
         timer: GlobalTimer,
         linkno: u8,
         destination: u8,
@@ -124,6 +128,7 @@ mod remote_moninj {
         let reply = drtio::aux_transact(
             aux_mutex,
             linkno,
+            routing_table,
             &drtioaux_async::Packet::InjectionStatusRequest {
                 destination: destination,
                 channel: channel as _,
@@ -135,8 +140,8 @@ mod remote_moninj {
         match reply {
             Ok(drtioaux_async::Packet::InjectionStatusReply { value }) => return value as i8,
             Ok(packet) => error!("received unexpected aux packet: {:?}", packet),
-            Err("link went down") => {
-                debug!("link is down");
+            Err(DrtioError::LinkDown) => {
+                warn!("link is down");
             }
             Err(e) => error!("aux packet error ({})", e),
         }
@@ -183,7 +188,7 @@ macro_rules! dispatch {
             local_moninj::$func(channel.into(), $($param, )*)
         } else {
             let linkno = hop - 1 as u8;
-            remote_moninj::$func($aux_mutex, $timer, linkno, destination, channel, $($param, )*).await
+            remote_moninj::$func($aux_mutex, $routing_table, $timer, linkno, destination, channel, $($param, )*).await
         }
     }}
 }

src/runtime/src/rtio_clocking.rs

@@ -1,14 +1,20 @@
+#[cfg(not(feature = "target_ebaz4205"))]
 use embedded_hal::blocking::delay::DelayMs;
 #[cfg(has_si5324)]
 use ksupport::i2c;
+#[cfg(not(feature = "target_ebaz4205"))]
 use libboard_artiq::pl;
 #[cfg(has_si5324)]
 use libboard_artiq::si5324;
+#[cfg(has_si549)]
+use libboard_artiq::si549;
 #[cfg(has_si5324)]
 use libboard_zynq::i2c::I2c;
 use libboard_zynq::timer::GlobalTimer;
 use libconfig::Config;
 use log::{info, warn};
+#[cfg(feature = "target_ebaz4205")]
+use {libboard_zynq::slcr, libregister::RegisterRW};
 
 #[derive(Debug, PartialEq, Copy, Clone)]
 #[allow(non_camel_case_types)]
@@ -67,7 +73,7 @@ fn get_rtio_clock_cfg(cfg: &Config) -> RtioClock {
     res
 }
 
-#[cfg(not(has_drtio))]
+#[cfg(not(any(has_drtio, feature = "target_ebaz4205")))]
 fn init_rtio(timer: &mut GlobalTimer) {
     info!("Switching SYS clocks...");
     unsafe {
@@ -260,6 +266,182 @@ fn setup_si5324(i2c: &mut I2c, timer: &mut GlobalTimer, clk: RtioClock) {
     si5324::setup(i2c, &si5324_settings, si5324_ref_input, timer).expect("cannot initialize Si5324");
 }
 
+#[cfg(all(has_si549, has_wrpll))]
+fn wrpll_setup(timer: &mut GlobalTimer, clk: RtioClock, si549_settings: &si549::FrequencySetting) {
+    // register values are directly copied from preconfigured mmcm
+    let (mmcm_setting, mmcm_bypass) = match clk {
+        RtioClock::Ext0_Synth0_10to125 => (
+            si549::wrpll_refclk::MmcmSetting {
+                // CLKFBOUT_MULT = 62.5, DIVCLK_DIVIDE = 1 , CLKOUT0_DIVIDE = 5
+                clkout0_reg1: 0x1083,
+                clkout0_reg2: 0x0080,
+                clkfbout_reg1: 0x179e,
+                clkfbout_reg2: 0x4c00,
+                div_reg: 0x1041,
+                lock_reg1: 0x00fa,
+                lock_reg2: 0x7c01,
+                lock_reg3: 0xffe9,
+                power_reg: 0x9900,
+                filt_reg1: 0x1008,
+                filt_reg2: 0x8800,
+            },
+            false,
+        ),
+        RtioClock::Ext0_Synth0_80to125 => (
+            si549::wrpll_refclk::MmcmSetting {
+                // CLKFBOUT_MULT = 15.625, DIVCLK_DIVIDE = 1 , CLKOUT0_DIVIDE = 10
+                clkout0_reg1: 0x1145,
+                clkout0_reg2: 0x0000,
+                clkfbout_reg1: 0x11c7,
+                clkfbout_reg2: 0x5880,
+                div_reg: 0x1041,
+                lock_reg1: 0x028a,
+                lock_reg2: 0x7c01,
+                lock_reg3: 0xffe9,
+                power_reg: 0x9900,
+                filt_reg1: 0x9908,
+                filt_reg2: 0x8100,
+            },
+            false,
+        ),
+        RtioClock::Ext0_Synth0_100to125 => (
+            si549::wrpll_refclk::MmcmSetting {
+                // CLKFBOUT_MULT = 12.5, DIVCLK_DIVIDE = 1 , CLKOUT0_DIVIDE = 10
+                clkout0_reg1: 0x1145,
+                clkout0_reg2: 0x0000,
+                clkfbout_reg1: 0x1145,
+                clkfbout_reg2: 0x4c00,
+                div_reg: 0x1041,
+                lock_reg1: 0x0339,
+                lock_reg2: 0x7c01,
+                lock_reg3: 0xffe9,
+                power_reg: 0x9900,
+                filt_reg1: 0x9108,
+                filt_reg2: 0x0100,
+            },
+            false,
+        ),
+        RtioClock::Ext0_Synth0_125to125 => (
+            si549::wrpll_refclk::MmcmSetting {
+                // CLKFBOUT_MULT = 10, DIVCLK_DIVIDE = 1 , CLKOUT0_DIVIDE = 10
+                clkout0_reg1: 0x1145,
+                clkout0_reg2: 0x0000,
+                clkfbout_reg1: 0x1145,
+                clkfbout_reg2: 0x0000,
+                div_reg: 0x1041,
+                lock_reg1: 0x03e8,
+                lock_reg2: 0x7001,
+                lock_reg3: 0xf3e9,
+                power_reg: 0x0100,
+                filt_reg1: 0x9908,
+                filt_reg2: 0x1100,
+            },
+            true,
+        ),
+        _ => unreachable!(),
+    };
+
+    si549::helper_setup(timer, &si549_settings).expect("cannot initialize helper Si549");
+    si549::wrpll_refclk::setup(timer, mmcm_setting, mmcm_bypass).expect("cannot initialize ref clk for wrpll");
+    si549::wrpll::select_recovered_clock(true, timer);
+}
+
+#[cfg(has_si549)]
+fn get_si549_setting(clk: RtioClock) -> si549::FrequencySetting {
+    match clk {
+        RtioClock::Ext0_Synth0_10to125 => {
+            info!("using 10MHz reference to make 125MHz RTIO clock with WRPLL");
+        }
+        RtioClock::Ext0_Synth0_80to125 => {
+            info!("using 80MHz reference to make 125MHz RTIO clock with WRPLL");
+        }
+        RtioClock::Ext0_Synth0_100to125 => {
+            info!("using 100MHz reference to make 125MHz RTIO clock with WRPLL");
+        }
+        RtioClock::Ext0_Synth0_125to125 => {
+            info!("using 125MHz reference to make 125MHz RTIO clock with WRPLL");
+        }
+        RtioClock::Int_100 => {
+            info!("using internal 100MHz RTIO clock");
+        }
+        RtioClock::Int_125 => {
+            info!("using internal 125MHz RTIO clock");
+        }
+        _ => {
+            warn!(
+                "rtio_clock setting '{:?}' is unsupported. Falling back to default internal 125MHz RTIO clock.",
+                clk
+            );
+        }
+    };
+
+    match clk {
+        RtioClock::Int_100 => {
+            si549::FrequencySetting {
+                main: si549::DividerConfig {
+                    hsdiv: 0x06C,
+                    lsdiv: 0,
+                    fbdiv: 0x046C5F49797,
+                },
+                helper: si549::DividerConfig {
+                    // 100MHz*32767/32768
+                    hsdiv: 0x06C,
+                    lsdiv: 0,
+                    fbdiv: 0x046C5670BBD,
+                },
+            }
+        }
+        _ => {
+            // Everything else use 125MHz
+            si549::FrequencySetting {
+                main: si549::DividerConfig {
+                    hsdiv: 0x058,
+                    lsdiv: 0,
+                    fbdiv: 0x04815791F25,
+                },
+                helper: si549::DividerConfig {
+                    // 125MHz*32767/32768
+                    hsdiv: 0x058,
+                    lsdiv: 0,
+                    fbdiv: 0x04814E8F442,
+                },
+            }
+        }
+    }
+}
+
+#[cfg(feature = "target_ebaz4205")]
+fn set_fclk0_freq(clk: RtioClock, cfg: &Config) {
+    let io_pll_freq: u32 = 1_000_000_000; // Hardcoded in zynq-rs
+    let mut target_freq = 0;
+    let mut divisor0 = 1u8;
+
+    match clk {
+        RtioClock::Int_100 => {
+            target_freq = 100_000_000;
+            divisor0 = 10;
+        }
+        RtioClock::Int_125 => {
+            target_freq = 125_000_000;
+            divisor0 = 8;
+        }
+        _ => {
+            warn!("Unsupported RTIO Clock: '{:?}'", clk);
+            return;
+        }
+    }
+
+    slcr::RegisterBlock::unlocked(|slcr| {
+        slcr.fpga0_clk_ctrl.modify(|_, w| w.divisor0(divisor0));
+    });
+
+    info!(
+        "Set FCLK0 to {:.2} MHz (target: {} MHz).",
+        io_pll_freq as f64 / divisor0 as f64,
+        target_freq / 1_000_000
+    );
+}
+
 pub fn init(timer: &mut GlobalTimer, cfg: &Config) {
     let clk = get_rtio_clock_cfg(cfg);
     #[cfg(has_si5324)]
@@ -274,9 +456,39 @@ pub fn init(timer: &mut GlobalTimer, cfg: &Config) {
         }
     }
 
+    #[cfg(has_si549)]
+    let si549_settings = get_si549_setting(clk);
+
+    #[cfg(has_si549)]
+    si549::main_setup(timer, &si549_settings).expect("cannot initialize main Si549");
+
     #[cfg(has_drtio)]
     init_drtio(timer);
 
-    #[cfg(not(has_drtio))]
+    #[cfg(not(any(has_drtio, feature = "target_ebaz4205")))]
     init_rtio(timer);
+
+    #[cfg(feature = "target_ebaz4205")]
+    {
+        match clk {
+            RtioClock::Int_100 | RtioClock::Int_125 => {
+                set_fclk0_freq(clk, cfg);
+            }
+            _ => {} // Not set for external clocks
+        }
+    }
+
+    #[cfg(all(has_si549, has_wrpll))]
+    {
+        // SYS CLK switch will reset CSRs that are used by WRPLL
+        match clk {
+            RtioClock::Ext0_Synth0_10to125
+            | RtioClock::Ext0_Synth0_80to125
+            | RtioClock::Ext0_Synth0_100to125
+            | RtioClock::Ext0_Synth0_125to125 => {
+                wrpll_setup(timer, clk, &si549_settings);
+            }
+            _ => {}
+        }
+    }
 }

src/runtime/src/rtio_dma.rs

@@ -142,9 +142,9 @@ pub mod remote_dma {
             }
         }
 
-        pub async fn playback_done(&mut self, destination: u8, error: u8, channel: u32, timestamp: u64) {
+        pub async fn playback_done(&mut self, source: u8, error: u8, channel: u32, timestamp: u64) {
             let mut traces_locked = self.traces.async_lock().await;
-            let mut trace = traces_locked.get_mut(&destination).unwrap();
+            let mut trace = traces_locked.get_mut(&source).unwrap();
             trace.state = RemoteState::PlaybackEnded {
                 error: error,
                 channel: channel,

src/runtime/src/subkernel.rs

@@ -1,18 +1,19 @@
 use alloc::{collections::BTreeMap, rc::Rc, vec::Vec};
 
 use libasync::task;
-use libboard_artiq::{drtio_routing::RoutingTable, drtioaux_proto::MASTER_PAYLOAD_MAX_SIZE};
+use libboard_artiq::{drtio_routing::RoutingTable,
+                     drtioaux_proto::{PayloadStatus, MASTER_PAYLOAD_MAX_SIZE}};
 use libboard_zynq::{time::Milliseconds, timer::GlobalTimer};
 use libcortex_a9::mutex::Mutex;
-use log::error;
+use log::{error, warn};
 
-use crate::rtio_mgt::drtio;
+use crate::rtio_mgt::{drtio, drtio::Error as DrtioError};
 
 #[derive(Debug, PartialEq, Clone, Copy)]
 pub enum FinishStatus {
     Ok,
     CommLost,
-    Exception,
+    Exception(u8), // exception source
 }
 
 #[derive(Debug, PartialEq, Clone, Copy)]
@@ -28,12 +29,13 @@ pub enum Error {
     Timeout,
     IncorrectState,
     SubkernelNotFound,
+    SubkernelException,
     CommLost,
-    DrtioError(&'static str),
+    DrtioError(DrtioError),
 }
 
-impl From<&'static str> for Error {
-    fn from(value: &'static str) -> Error {
+impl From<DrtioError> for Error {
+    fn from(value: DrtioError) -> Error {
         Error::DrtioError(value)
     }
 }
@@ -98,12 +100,22 @@ pub async fn load(
     timer: GlobalTimer,
     id: u32,
     run: bool,
+    timestamp: u64,
 ) -> Result<(), Error> {
     if let Some(subkernel) = SUBKERNELS.async_lock().await.get_mut(&id) {
         if subkernel.state != SubkernelState::Uploaded {
             return Err(Error::IncorrectState);
         }
-        drtio::subkernel_load(aux_mutex, routing_table, timer, id, subkernel.destination, run).await?;
+        drtio::subkernel_load(
+            aux_mutex,
+            routing_table,
+            timer,
+            id,
+            subkernel.destination,
+            run,
+            timestamp,
+        )
+        .await?;
         if run {
             subkernel.state = SubkernelState::Running;
         }
@@ -119,15 +131,17 @@ pub async fn clear_subkernels() {
     CURRENT_MESSAGES.async_lock().await.clear();
 }
 
-pub async fn subkernel_finished(id: u32, with_exception: bool) {
+pub async fn subkernel_finished(id: u32, with_exception: bool, exception_src: u8) {
     // called upon receiving DRTIO SubkernelRunDone
     // may be None if session ends and is cleared
     if let Some(subkernel) = SUBKERNELS.async_lock().await.get_mut(&id) {
-        subkernel.state = SubkernelState::Finished {
-            status: match with_exception {
-                true => FinishStatus::Exception,
-                false => FinishStatus::Ok,
-            },
+        if subkernel.state == SubkernelState::Running {
+            subkernel.state = SubkernelState::Finished {
+                status: match with_exception {
+                    true => FinishStatus::Exception(exception_src),
+                    false => FinishStatus::Ok,
+                },
+            }
         }
     }
 }
@@ -165,25 +179,34 @@ pub async fn await_finish(
     routing_table: &RoutingTable,
     timer: GlobalTimer,
     id: u32,
-    timeout: u64,
+    timeout: i64,
 ) -> Result<SubkernelFinished, Error> {
     match SUBKERNELS.async_lock().await.get(&id).unwrap().state {
         SubkernelState::Running | SubkernelState::Finished { .. } => (),
         _ => return Err(Error::IncorrectState),
     }
-    let max_time = timer.get_time() + Milliseconds(timeout);
-    while timer.get_time() < max_time {
-        {
+    if timeout > 0 {
+        let max_time = timer.get_time() + Milliseconds(timeout as u64);
+        while timer.get_time() < max_time {
             match SUBKERNELS.async_lock().await.get(&id).unwrap().state {
                 SubkernelState::Finished { .. } => break,
                 _ => (),
             };
+            task::r#yield().await;
+        }
+        if timer.get_time() >= max_time {
+            error!("Remote subkernel finish await timed out");
+            return Err(Error::Timeout);
+        }
+    } else {
+        // no timeout, wait forever
+        loop {
+            match SUBKERNELS.async_lock().await.get(&id).unwrap().state {
+                SubkernelState::Finished { .. } => break,
+                _ => (),
+            };
+            task::r#yield().await;
         }
-        task::r#yield().await;
-    }
-    if timer.get_time() >= max_time {
-        error!("Remote subkernel finish await timed out");
-        return Err(Error::Timeout);
     }
     if let Some(subkernel) = SUBKERNELS.async_lock().await.get_mut(&id) {
         match subkernel.state {
@@ -192,11 +215,8 @@ pub async fn await_finish(
                 Ok(SubkernelFinished {
                     id: id,
                     status: status,
-                    exception: if status == FinishStatus::Exception {
-                        Some(
-                            drtio::subkernel_retrieve_exception(aux_mutex, routing_table, timer, subkernel.destination)
-                                .await?,
-                        )
+                    exception: if let FinishStatus::Exception(dest) = status {
+                        Some(drtio::subkernel_retrieve_exception(aux_mutex, routing_table, timer, dest).await?)
                     } else {
                         None
                     },
@@ -220,13 +240,28 @@ static MESSAGE_QUEUE: Mutex<Vec<Message>> = Mutex::new(Vec::new());
 // currently under construction message(s) (can be from multiple sources)
 static CURRENT_MESSAGES: Mutex<BTreeMap<u32, Message>> = Mutex::new(BTreeMap::new());
 
-pub async fn message_handle_incoming(id: u32, last: bool, length: usize, data: &[u8; MASTER_PAYLOAD_MAX_SIZE]) {
+pub async fn message_handle_incoming(
+    id: u32,
+    status: PayloadStatus,
+    length: usize,
+    data: &[u8; MASTER_PAYLOAD_MAX_SIZE],
+) {
     // called when receiving a message from satellite
-    if SUBKERNELS.async_lock().await.get(&id).is_none() {
-        // do not add messages for non-existing or deleted subkernels
-        return;
+    {
+        let subkernel_lock = SUBKERNELS.async_lock().await;
+        let subkernel = subkernel_lock.get(&id);
+        if subkernel.is_some() && subkernel.unwrap().state != SubkernelState::Running {
+            // do not add messages for non-running or deleted subkernels
+            warn!("received a message for a non-running subkernel #{}", id);
+            return;
+        }
     }
     let mut current_messages = CURRENT_MESSAGES.async_lock().await;
+
+    if status.is_first() {
+        current_messages.remove(&id);
+    }
+
     match current_messages.get_mut(&id) {
         Some(message) => message.data.extend(&data[..length]),
         None => {
@@ -240,7 +275,7 @@ pub async fn message_handle_incoming(id: u32, last: bool, length: usize, data: &
             );
         }
     };
-    if last {
+    if status.is_last() {
         // when done, remove from working queue
         MESSAGE_QUEUE
             .async_lock()
@@ -249,16 +284,19 @@ pub async fn message_handle_incoming(id: u32, last: bool, length: usize, data: &
     }
 }
 
-pub async fn message_await(id: u32, timeout: u64, timer: GlobalTimer) -> Result<Message, Error> {
-    match SUBKERNELS.async_lock().await.get(&id).unwrap().state {
-        SubkernelState::Finished {
-            status: FinishStatus::CommLost,
-        } => return Err(Error::CommLost),
-        SubkernelState::Running | SubkernelState::Finished { .. } => (),
-        _ => return Err(Error::IncorrectState),
+pub async fn message_await(id: u32, timeout: i64, timer: GlobalTimer) -> Result<Message, Error> {
+    let is_subkernel = SUBKERNELS.async_lock().await.get(&id).is_some();
+    if is_subkernel {
+        match SUBKERNELS.async_lock().await.get(&id).unwrap().state {
+            SubkernelState::Finished {
+                status: FinishStatus::CommLost,
+            } => return Err(Error::CommLost),
+            SubkernelState::Running | SubkernelState::Finished { .. } => (),
+            _ => return Err(Error::IncorrectState),
+        }
     }
-    let max_time = timer.get_time() + Milliseconds(timeout);
-    while timer.get_time() < max_time {
+    let max_time = timer.get_time() + Milliseconds(timeout as u64);
+    while timeout < 0 || (timeout > 0 && timer.get_time() < max_time) {
         {
             let mut message_queue = MESSAGE_QUEUE.async_lock().await;
             for i in 0..message_queue.len() {
@@ -269,6 +307,17 @@ pub async fn message_await(id: u32, timeout: u64, timer: GlobalTimer) -> Result<
                 }
             }
         }
+        if is_subkernel {
+            match SUBKERNELS.async_lock().await.get(&id).unwrap().state {
+                SubkernelState::Finished {
+                    status: FinishStatus::CommLost,
+                } => return Err(Error::CommLost),
+                SubkernelState::Finished {
+                    status: FinishStatus::Exception(_),
+                } => return Err(Error::SubkernelException),
+                _ => (),
+            }
+        }
         task::r#yield().await;
     }
     Err(Error::Timeout)
@@ -279,9 +328,8 @@ pub async fn message_send<'a>(
     routing_table: &RoutingTable,
     timer: GlobalTimer,
     id: u32,
+    destination: u8,
     message: Vec<u8>,
 ) -> Result<(), Error> {
-    let destination = SUBKERNELS.async_lock().await.get(&id).unwrap().destination;
-    // rpc data prepared by the kernel core already
     Ok(drtio::subkernel_send_message(aux_mutex, routing_table, timer, id, destination, &message).await?)
 }

src/satman/Cargo.toml.tpl

@@ -7,6 +7,7 @@ build = "build.rs"
 [features]
 target_zc706 = ["libboard_zynq/target_zc706", "libsupport_zynq/target_zc706", "libconfig/target_zc706", "libboard_artiq/target_zc706"]
 target_kasli_soc = ["libboard_zynq/target_kasli_soc", "libsupport_zynq/target_kasli_soc", "libconfig/target_kasli_soc", "libboard_artiq/target_kasli_soc"]
+calibrate_wrpll_skew = ["libboard_artiq/calibrate_wrpll_skew"]
 default = ["target_zc706", ]
 
 [build-dependencies]
@@ -14,7 +15,9 @@ build_zynq = { path = "../libbuild_zynq" }
 
 [dependencies]
 log = { version = "0.4", default-features = false }
+byteorder = { version = "1.3", default-features = false }
 core_io = { version = "0.1", features = ["collections"] }
+crc = { version = "1.7", default-features = false }
 cslice = "0.3"
 embedded-hal = "0.2"
 

src/satman/src/dma.rs

@@ -1,7 +1,13 @@
-use alloc::{collections::btree_map::BTreeMap, vec::Vec};
+use alloc::{collections::btree_map::BTreeMap, string::String, vec::Vec};
+use core::mem;
 
-use libboard_artiq::pl::csr;
+use ksupport::kernel::DmaRecorder;
+use libboard_artiq::{drtio_routing::RoutingTable,
+                     drtioaux_proto::{Packet, PayloadStatus, MASTER_PAYLOAD_MAX_SIZE},
+                     pl::csr};
 use libcortex_a9::cache::dcci_slice;
+use routing::{Router, Sliceable};
+use subkernel::Manager as KernelManager;
 
 const ALIGNMENT: usize = 64;
 
@@ -12,16 +18,20 @@ enum ManagerState {
 }
 
 pub struct RtioStatus {
+    pub source: u8,
     pub id: u32,
     pub error: u8,
     pub channel: u32,
     pub timestamp: u64,
 }
 
+#[derive(Debug)]
 pub enum Error {
     IdNotFound,
     PlaybackInProgress,
     EntryNotComplete,
+    MasterDmaFound,
+    UploadFail,
 }
 
 #[derive(Debug)]
@@ -29,13 +39,228 @@ struct Entry {
     trace: Vec<u8>,
     padding_len: usize,
     complete: bool,
+    duration: i64, // relevant for local DMA
+}
+
+impl Entry {
+    pub fn from_vec(data: Vec<u8>, duration: i64) -> Entry {
+        let mut entry = Entry {
+            trace: data,
+            padding_len: 0,
+            complete: true,
+            duration: duration,
+        };
+        entry.realign();
+        entry
+    }
+
+    pub fn id(&self) -> u32 {
+        self.trace[self.padding_len..].as_ptr() as u32
+    }
+
+    pub fn realign(&mut self) {
+        self.trace.push(0);
+        let data_len = self.trace.len();
+
+        self.trace.reserve(ALIGNMENT - 1);
+        let padding = ALIGNMENT - self.trace.as_ptr() as usize % ALIGNMENT;
+        let padding = if padding == ALIGNMENT { 0 } else { padding };
+        for _ in 0..padding {
+            // Vec guarantees that this will not reallocate
+            self.trace.push(0)
+        }
+        for i in 1..data_len + 1 {
+            self.trace[data_len + padding - i] = self.trace[data_len - i]
+        }
+        self.complete = true;
+        self.padding_len = padding;
+
+        dcci_slice(&self.trace);
+    }
+}
+
+#[derive(Debug)]
+enum RemoteTraceState {
+    Unsent,
+    Sending(usize),
+    Ready,
+    Running(usize),
+}
+
+#[derive(Debug)]
+struct RemoteTraces {
+    remote_traces: BTreeMap<u8, Sliceable>,
+    state: RemoteTraceState,
+}
+
+impl RemoteTraces {
+    pub fn new(traces: BTreeMap<u8, Sliceable>) -> RemoteTraces {
+        RemoteTraces {
+            remote_traces: traces,
+            state: RemoteTraceState::Unsent,
+        }
+    }
+
+    // on subkernel request
+    pub fn upload_traces(
+        &mut self,
+        id: u32,
+        router: &mut Router,
+        rank: u8,
+        self_destination: u8,
+        routing_table: &RoutingTable,
+    ) -> usize {
+        let len = self.remote_traces.len();
+        if len > 0 {
+            self.state = RemoteTraceState::Sending(self.remote_traces.len());
+            for (dest, trace) in self.remote_traces.iter_mut() {
+                // queue up the first packet for all destinations, rest will be sent after first ACK
+                let mut data_slice: [u8; MASTER_PAYLOAD_MAX_SIZE] = [0; MASTER_PAYLOAD_MAX_SIZE];
+                let meta = trace.get_slice_master(&mut data_slice);
+                router.route(
+                    Packet::DmaAddTraceRequest {
+                        source: self_destination,
+                        destination: *dest,
+                        id: id,
+                        status: meta.status,
+                        length: meta.len,
+                        trace: data_slice,
+                    },
+                    routing_table,
+                    rank,
+                    self_destination,
+                );
+            }
+        }
+        len
+    }
+
+    // on incoming Packet::DmaAddTraceReply
+    pub fn ack_upload(
+        &mut self,
+        kernel_manager: &mut KernelManager,
+        source: u8,
+        id: u32,
+        succeeded: bool,
+        router: &mut Router,
+        rank: u8,
+        self_destination: u8,
+        routing_table: &RoutingTable,
+    ) {
+        if let RemoteTraceState::Sending(count) = self.state {
+            if let Some(trace) = self.remote_traces.get_mut(&source) {
+                if trace.at_end() {
+                    if count - 1 == 0 {
+                        self.state = RemoteTraceState::Ready;
+                        if let Some((id, timestamp)) = kernel_manager.ddma_remote_uploaded(succeeded) {
+                            self.playback(id, timestamp, router, rank, self_destination, routing_table);
+                        }
+                    } else {
+                        self.state = RemoteTraceState::Sending(count - 1);
+                    }
+                } else {
+                    // send next slice
+                    let mut data_slice: [u8; MASTER_PAYLOAD_MAX_SIZE] = [0; MASTER_PAYLOAD_MAX_SIZE];
+                    let meta = trace.get_slice_master(&mut data_slice);
+                    router.route(
+                        Packet::DmaAddTraceRequest {
+                            source: self_destination,
+                            destination: meta.destination,
+                            id: id,
+                            status: meta.status,
+                            length: meta.len,
+                            trace: data_slice,
+                        },
+                        routing_table,
+                        rank,
+                        self_destination,
+                    );
+                }
+            }
+        }
+    }
+
+    // on subkernel request
+    pub fn playback(
+        &mut self,
+        id: u32,
+        timestamp: u64,
+        router: &mut Router,
+        rank: u8,
+        self_destination: u8,
+        routing_table: &RoutingTable,
+    ) {
+        // route all the playback requests
+        // remote traces (local trace runs on core1 unlike mainline firmware)
+        self.state = RemoteTraceState::Running(self.remote_traces.len());
+        for (dest, _) in self.remote_traces.iter() {
+            router.route(
+                Packet::DmaPlaybackRequest {
+                    source: self_destination,
+                    destination: *dest,
+                    id: id,
+                    timestamp: timestamp,
+                },
+                routing_table,
+                rank,
+                self_destination,
+            );
+            // response will be ignored (succeeded = false handled by the main thread)
+        }
+    }
+
+    // on incoming Packet::DmaPlaybackDone
+    pub fn remote_finished(&mut self, kernel_manager: &mut KernelManager, error: u8, channel: u32, timestamp: u64) {
+        if let RemoteTraceState::Running(count) = self.state {
+            if error != 0 || count - 1 == 0 {
+                // notify the kernel about a DDMA error or finish
+                kernel_manager.ddma_finished(error, channel, timestamp);
+                self.state = RemoteTraceState::Ready;
+                // further messages will be ignored (if there was an error)
+            } else {
+                // no error and not the last one awaited
+                self.state = RemoteTraceState::Running(count - 1);
+            }
+        }
+    }
+
+    pub fn erase(
+        &mut self,
+        id: u32,
+        router: &mut Router,
+        rank: u8,
+        self_destination: u8,
+        routing_table: &RoutingTable,
+    ) {
+        for (dest, _) in self.remote_traces.iter() {
+            router.route(
+                Packet::DmaRemoveTraceRequest {
+                    source: self_destination,
+                    destination: *dest,
+                    id: id,
+                },
+                routing_table,
+                rank,
+                self_destination,
+            );
+            // response will be ignored as this object will stop existing too
+        }
+    }
+
+    pub fn has_remote_traces(&self) -> bool {
+        self.remote_traces.len() > 0
+    }
 }
 
 #[derive(Debug)]
 pub struct Manager {
-    entries: BTreeMap<u32, Entry>,
+    entries: BTreeMap<(u8, u32), Entry>,
     state: ManagerState,
-    currentid: u32,
+    current_id: u32,
+    current_source: u8,
+
+    remote_entries: BTreeMap<u32, RemoteTraces>,
+    name_map: BTreeMap<String, u32>,
 }
 
 impl Manager {
@@ -45,79 +270,238 @@ impl Manager {
         unsafe { while csr::rtio_dma::enable_read() != 0 {} }
         Manager {
             entries: BTreeMap::new(),
-            currentid: 0,
+            current_id: 0,
+            current_source: 0,
             state: ManagerState::Idle,
+            remote_entries: BTreeMap::new(),
+            name_map: BTreeMap::new(),
         }
     }
 
-    pub fn add(&mut self, id: u32, last: bool, trace: &[u8], trace_len: usize) -> Result<(), Error> {
-        let entry = match self.entries.get_mut(&id) {
+    pub fn add(
+        &mut self,
+        source: u8,
+        id: u32,
+        status: PayloadStatus,
+        trace: &[u8],
+        trace_len: usize,
+    ) -> Result<(), Error> {
+        let entry = match self.entries.get_mut(&(source, id)) {
             Some(entry) => {
-                if entry.complete {
+                if entry.complete || status.is_first() {
                     // replace entry
-                    self.entries.remove(&id);
+                    self.entries.remove(&(source, id));
                     self.entries.insert(
-                        id,
+                        (source, id),
                         Entry {
                             trace: Vec::new(),
                             padding_len: 0,
                             complete: false,
+                            duration: 0,
                         },
                     );
-                    self.entries.get_mut(&id).unwrap()
+                    self.entries.get_mut(&(source, id)).unwrap()
                 } else {
                     entry
                 }
             }
             None => {
                 self.entries.insert(
-                    id,
+                    (source, id),
                     Entry {
                         trace: Vec::new(),
                         padding_len: 0,
                         complete: false,
+                        duration: 0,
                     },
                 );
-                self.entries.get_mut(&id).unwrap()
+                self.entries.get_mut(&(source, id)).unwrap()
             }
         };
         entry.trace.extend(&trace[0..trace_len]);
 
-        if last {
-            entry.trace.push(0);
-            let data_len = entry.trace.len();
-
-            // Realign.
-            entry.trace.reserve(ALIGNMENT - 1);
-            let padding = ALIGNMENT - entry.trace.as_ptr() as usize % ALIGNMENT;
-            let padding = if padding == ALIGNMENT { 0 } else { padding };
-            for _ in 0..padding {
-                // Vec guarantees that this will not reallocate
-                entry.trace.push(0)
-            }
-            for i in 1..data_len + 1 {
-                entry.trace[data_len + padding - i] = entry.trace[data_len - i]
-            }
-            entry.complete = true;
-            entry.padding_len = padding;
-            dcci_slice(&entry.trace);
+        if status.is_last() {
+            entry.realign();
         }
         Ok(())
     }
 
-    pub fn erase(&mut self, id: u32) -> Result<(), Error> {
-        match self.entries.remove(&id) {
+    // api for DRTIO
+    pub fn erase(&mut self, source: u8, id: u32) -> Result<(), Error> {
+        match self.entries.remove(&(source, id)) {
             Some(_) => Ok(()),
             None => Err(Error::IdNotFound),
         }
     }
 
-    pub fn playback(&mut self, id: u32, timestamp: u64) -> Result<(), Error> {
+    // API for subkernel
+    pub fn erase_name(
+        &mut self,
+        name: &str,
+        router: &mut Router,
+        rank: u8,
+        self_destination: u8,
+        routing_table: &RoutingTable,
+    ) {
+        if let Some(id) = self.name_map.get(name) {
+            if let Some(traces) = self.remote_entries.get_mut(&id) {
+                traces.erase(*id, router, rank, self_destination, routing_table);
+                self.remote_entries.remove(&id);
+            }
+            self.entries.remove(&(self_destination, *id));
+            self.name_map.remove(name);
+        }
+    }
+
+    pub fn remote_finished(
+        &mut self,
+        kernel_manager: &mut KernelManager,
+        id: u32,
+        error: u8,
+        channel: u32,
+        timestamp: u64,
+    ) {
+        if let Some(entry) = self.remote_entries.get_mut(&id) {
+            entry.remote_finished(kernel_manager, error, channel, timestamp);
+        }
+    }
+
+    pub fn ack_upload(
+        &mut self,
+        kernel_manager: &mut KernelManager,
+        source: u8,
+        id: u32,
+        succeeded: bool,
+        router: &mut Router,
+        rank: u8,
+        self_destination: u8,
+        routing_table: &RoutingTable,
+    ) {
+        if let Some(entry) = self.remote_entries.get_mut(&id) {
+            entry.ack_upload(
+                kernel_manager,
+                source,
+                id,
+                succeeded,
+                router,
+                rank,
+                self_destination,
+                routing_table,
+            );
+        }
+    }
+
+    // API for subkernel
+    pub fn upload_traces(
+        &mut self,
+        id: u32,
+        router: &mut Router,
+        rank: u8,
+        self_destination: u8,
+        routing_table: &RoutingTable,
+    ) -> Result<usize, Error> {
+        let remote_traces = self.remote_entries.get_mut(&id);
+        let mut len = 0;
+        if let Some(traces) = remote_traces {
+            len = traces.upload_traces(id, router, rank, self_destination, routing_table);
+        }
+        Ok(len)
+    }
+
+    // API for subkernel
+    pub fn playback_remote(
+        &mut self,
+        id: u32,
+        timestamp: u64,
+        router: &mut Router,
+        rank: u8,
+        self_destination: u8,
+        routing_table: &RoutingTable,
+    ) -> Result<(), Error> {
+        if let Some(traces) = self.remote_entries.get_mut(&id) {
+            traces.playback(id, timestamp, router, rank, self_destination, routing_table);
+            Ok(())
+        } else {
+            Err(Error::IdNotFound)
+        }
+    }
+
+    // API for subkernel
+    pub fn cleanup(&mut self, router: &mut Router, rank: u8, self_destination: u8, routing_table: &RoutingTable) {
+        // after subkernel ends, remove all self-generated traces
+        for (_, id) in self.name_map.iter_mut() {
+            if let Some(traces) = self.remote_entries.get_mut(&id) {
+                traces.erase(*id, router, rank, self_destination, routing_table);
+                self.remote_entries.remove(&id);
+            }
+            self.entries.remove(&(self_destination, *id));
+        }
+        self.name_map.clear();
+    }
+
+    // API for subkernel
+    pub fn retrieve(&self, self_destination: u8, name: &String) -> Option<(i32, i64, bool)> {
+        let id = self.name_map.get(name)?;
+        let duration = self.entries.get(&(self_destination, *id))?.duration;
+        let uses_ddma = self.has_remote_traces(*id);
+        Some((*id as i32, duration, uses_ddma))
+    }
+
+    pub fn has_remote_traces(&self, id: u32) -> bool {
+        match self.remote_entries.get(&id) {
+            Some(traces) => traces.has_remote_traces(),
+            _ => false,
+        }
+    }
+
+    pub fn put_record(&mut self, mut recorder: DmaRecorder, self_destination: u8) -> Result<u32, Error> {
+        let mut remote_traces: BTreeMap<u8, Sliceable> = BTreeMap::new();
+
+        let mut local_trace: Vec<u8> = Vec::new();
+        // analyze each entry and put in proper buckets, as the kernel core
+        // sends whole chunks, to limit comms/kernel CPU communication,
+        // and as only comms core has access to varios DMA buffers.
+        let mut ptr = 0;
+        recorder.buffer.push(0);
+        while recorder.buffer[ptr] != 0 {
+            // ptr + 3 = tgt >> 24 (destination)
+            let len = recorder.buffer[ptr] as usize;
+            let destination = recorder.buffer[ptr + 3];
+            if destination == 0 {
+                return Err(Error::MasterDmaFound);
+            } else if destination == self_destination {
+                local_trace.extend(&recorder.buffer[ptr..ptr + len]);
+            } else {
+                if let Some(remote_trace) = remote_traces.get_mut(&destination) {
+                    remote_trace.extend(&recorder.buffer[ptr..ptr + len]);
+                } else {
+                    remote_traces.insert(
+                        destination,
+                        Sliceable::new(destination, recorder.buffer[ptr..ptr + len].to_vec()),
+                    );
+                }
+            }
+            // and jump to the next event
+            ptr += len;
+        }
+        let local_entry = Entry::from_vec(local_trace, recorder.duration);
+
+        let id = local_entry.id();
+        self.entries.insert((self_destination, id), local_entry);
+        self.remote_entries.insert(id, RemoteTraces::new(remote_traces));
+        let mut name = String::new();
+        mem::swap(&mut recorder.name, &mut name);
+        self.name_map.insert(name, id);
+
+        Ok(id)
+    }
+
+    pub fn playback(&mut self, source: u8, id: u32, timestamp: u64) -> Result<(), Error> {
         if self.state != ManagerState::Idle {
             return Err(Error::PlaybackInProgress);
         }
 
-        let entry = match self.entries.get(&id) {
+        let entry = match self.entries.get(&(source, id)) {
             Some(entry) => entry,
             None => {
                 return Err(Error::IdNotFound);
@@ -130,7 +514,8 @@ impl Manager {
         assert!(ptr as u32 % 64 == 0);
 
         self.state = ManagerState::Playback;
-        self.currentid = id;
+        self.current_id = id;
+        self.current_source = source;
 
         unsafe {
             csr::rtio_dma::base_address_write(ptr as u32);
@@ -162,7 +547,8 @@ impl Manager {
                     csr::rtio_dma::error_write(1);
                 }
                 return Some(RtioStatus {
-                    id: self.currentid,
+                    source: self.current_source,
+                    id: self.current_id,
                     error: error,
                     channel: channel,
                     timestamp: timestamp,

src/satman/src/mgmt.rs

@@ -0,0 +1,149 @@
+use alloc::vec::Vec;
+
+use byteorder::{ByteOrder, NativeEndian};
+use crc::crc32;
+use io::{ProtoRead, ProtoWrite};
+use libboard_artiq::{drtioaux_proto::SAT_PAYLOAD_MAX_SIZE,
+                     logger::{BufferLogger, LogBufferRef}};
+use libconfig::Config;
+use log::{debug, error, info, warn, LevelFilter};
+
+use crate::routing::{SliceMeta, Sliceable};
+
+type Result<T> = core::result::Result<T, ()>;
+
+pub fn byte_to_level_filter(level_byte: u8) -> Result<LevelFilter> {
+    Ok(match level_byte {
+        0 => LevelFilter::Off,
+        1 => LevelFilter::Error,
+        2 => LevelFilter::Warn,
+        3 => LevelFilter::Info,
+        4 => LevelFilter::Debug,
+        5 => LevelFilter::Trace,
+        lv => {
+            error!("unknown log level: {}", lv);
+            return Err(());
+        }
+    })
+}
+
+fn get_logger_buffer() -> LogBufferRef<'static> {
+    let logger = unsafe { BufferLogger::get_logger().as_mut().unwrap() };
+    loop {
+        if let Some(buffer_ref) = logger.buffer() {
+            return buffer_ref;
+        }
+    }
+}
+
+pub fn clear_log() {
+    let mut buffer = get_logger_buffer();
+    buffer.clear();
+}
+
+pub struct Manager<'a> {
+    cfg: &'a mut Config,
+    last_log: Sliceable,
+    config_payload: Vec<u8>,
+    last_value: Sliceable,
+    image_payload: Vec<u8>,
+}
+
+impl<'a> Manager<'_> {
+    pub fn new(cfg: &mut Config) -> Manager {
+        Manager {
+            cfg: cfg,
+            last_log: Sliceable::new(0, Vec::new()),
+            config_payload: Vec::new(),
+            last_value: Sliceable::new(0, Vec::new()),
+            image_payload: Vec::new(),
+        }
+    }
+
+    pub fn log_get_slice(&mut self, data_slice: &mut [u8; SAT_PAYLOAD_MAX_SIZE], consume: bool) -> SliceMeta {
+        // Populate buffer if depleted
+        if self.last_log.at_end() {
+            let mut buffer = get_logger_buffer();
+            self.last_log.extend(buffer.extract().as_bytes());
+            if consume {
+                buffer.clear();
+            }
+        }
+
+        self.last_log.get_slice_satellite(data_slice)
+    }
+
+    pub fn fetch_config_value(&mut self, key: &str) -> Result<()> {
+        self.cfg
+            .read(&key)
+            .map(|value| {
+                debug!("got value");
+                self.last_value = Sliceable::new(0, value)
+            })
+            .map_err(|_| warn!("read error: no such key"))
+    }
+
+    pub fn get_config_value_slice(&mut self, data_slice: &mut [u8; SAT_PAYLOAD_MAX_SIZE]) -> SliceMeta {
+        self.last_value.get_slice_satellite(data_slice)
+    }
+
+    pub fn add_config_data(&mut self, data: &[u8], data_len: usize) {
+        self.config_payload.write_all(&data[..data_len]).unwrap();
+    }
+
+    pub fn clear_config_data(&mut self) {
+        self.config_payload.clear();
+    }
+
+    pub fn write_config(&mut self) -> Result<()> {
+        let mut payload = &self.config_payload[..];
+        let key = payload.read_string().map_err(|_err| error!("error on reading key"))?;
+        debug!("write key: {}", key);
+        let value = payload.read_bytes().unwrap();
+
+        self.cfg
+            .write(&key, value)
+            .map(|()| debug!("write success"))
+            .map_err(|err| error!("failed to write: {:?}", err))
+    }
+
+    pub fn remove_config(&mut self, key: &str) -> Result<()> {
+        debug!("erase key: {}", key);
+        self.cfg
+            .remove(&key)
+            .map(|()| debug!("erase success"))
+            .map_err(|err| warn!("failed to erase: {:?}", err))
+    }
+
+    pub fn allocate_image_buffer(&mut self, image_size: usize) {
+        self.image_payload = Vec::with_capacity(image_size);
+    }
+
+    pub fn add_image_data(&mut self, data: &[u8], data_len: usize) {
+        self.image_payload.extend(&data[..data_len]);
+    }
+
+    pub fn write_image(&self) {
+        let mut image = self.image_payload.clone();
+        let image_ref = &image[..];
+        let bin_len = image.len() - 4;
+
+        let (image_ref, expected_crc) = {
+            let (image_ref, crc_slice) = image_ref.split_at(bin_len);
+            (image_ref, NativeEndian::read_u32(crc_slice))
+        };
+
+        let actual_crc = crc32::checksum_ieee(image_ref);
+
+        if actual_crc == expected_crc {
+            info!("CRC passed. Writing boot image to SD card...");
+            image.truncate(bin_len);
+            self.cfg.write("boot", image).expect("failed to write boot image");
+        } else {
+            panic!(
+                "CRC failed, images have not been written to flash.\n(actual {:08x}, expected {:08x})",
+                actual_crc, expected_crc
+            );
+        }
+    }
+}

src/satman/src/repeater.rs

@@ -6,6 +6,7 @@ use libboard_artiq::{drtio_routing, drtioaux};
 #[cfg(has_drtio_routing)]
 use libboard_zynq::time::Milliseconds;
 use libboard_zynq::timer::GlobalTimer;
+use routing::Router;
 
 #[cfg(has_drtio_routing)]
 fn rep_link_rx_up(repno: u8) -> bool {
@@ -53,7 +54,14 @@ impl Repeater {
         self.state == RepeaterState::Up
     }
 
-    pub fn service(&mut self, routing_table: &drtio_routing::RoutingTable, rank: u8, timer: &mut GlobalTimer) {
+    pub fn service(
+        &mut self,
+        routing_table: &drtio_routing::RoutingTable,
+        rank: u8,
+        destination: u8,
+        router: &mut Router,
+        timer: &mut GlobalTimer,
+    ) {
         self.process_local_errors();
 
         match self.state {
@@ -79,6 +87,10 @@ impl Repeater {
                 if rep_link_rx_up(self.repno) {
                     if let Ok(Some(drtioaux::Packet::EchoReply)) = drtioaux::recv(self.auxno) {
                         info!("[REP#{}] remote replied after {} packets", self.repno, ping_count);
+                        let max_time = timer.get_time() + Milliseconds(200);
+                        while timer.get_time() < max_time {
+                            let _ = drtioaux::recv(self.auxno);
+                        }
                         self.state = RepeaterState::Up;
                         if let Err(e) = self.sync_tsc(timer) {
                             error!("[REP#{}] failed to sync TSC ({:?})", self.repno, e);
@@ -111,7 +123,7 @@ impl Repeater {
                 }
             }
             RepeaterState::Up => {
-                self.process_unsolicited_aux();
+                self.process_unsolicited_aux(routing_table, rank, destination, router);
                 if !rep_link_rx_up(self.repno) {
                     info!("[REP#{}] link is down", self.repno);
                     self.state = RepeaterState::Down;
@@ -126,9 +138,15 @@ impl Repeater {
         }
     }
 
-    fn process_unsolicited_aux(&self) {
+    fn process_unsolicited_aux(
+        &self,
+        routing_table: &drtio_routing::RoutingTable,
+        rank: u8,
+        destination: u8,
+        router: &mut Router,
+    ) {
         match drtioaux::recv(self.auxno) {
-            Ok(Some(packet)) => warn!("[REP#{}] unsolicited aux packet: {:?}", self.repno, packet),
+            Ok(Some(packet)) => router.route(packet, routing_table, rank, destination),
             Ok(None) => (),
             Err(_) => warn!("[REP#{}] aux packet error", self.repno),
         }
@@ -190,14 +208,45 @@ impl Repeater {
         }
     }
 
-    pub fn aux_forward(&self, request: &drtioaux::Packet, timer: &mut GlobalTimer) -> Result<(), drtioaux::Error> {
+    pub fn aux_forward(
+        &self,
+        request: &drtioaux::Packet,
+        router: &mut Router,
+        routing_table: &drtio_routing::RoutingTable,
+        rank: u8,
+        self_destination: u8,
+        timer: &mut GlobalTimer,
+    ) -> Result<(), drtioaux::Error> {
+        self.aux_send(request)?;
+        loop {
+            let reply = self.recv_aux_timeout(200, timer)?;
+            match reply {
+                // async/locally requested packets to be consumed or routed
+                // these may come while a packet would be forwarded
+                drtioaux::Packet::DmaPlaybackStatus { .. }
+                | drtioaux::Packet::SubkernelFinished { .. }
+                | drtioaux::Packet::SubkernelMessage { .. }
+                | drtioaux::Packet::SubkernelMessageAck { .. }
+                | drtioaux::Packet::SubkernelLoadRunReply { .. }
+                | drtioaux::Packet::SubkernelException { .. }
+                | drtioaux::Packet::DmaAddTraceReply { .. }
+                | drtioaux::Packet::DmaPlaybackReply { .. } => {
+                    router.route(reply, routing_table, rank, self_destination);
+                }
+                _ => {
+                    drtioaux::send(0, &reply).unwrap();
+                    break;
+                }
+            }
+        }
+        Ok(())
+    }
+
+    pub fn aux_send(&self, request: &drtioaux::Packet) -> Result<(), drtioaux::Error> {
         if self.state != RepeaterState::Up {
             return Err(drtioaux::Error::LinkDown);
         }
-        drtioaux::send(self.auxno, request).unwrap();
-        let reply = self.recv_aux_timeout(200, timer)?;
-        drtioaux::send(0, &reply).unwrap();
-        Ok(())
+        drtioaux::send(self.auxno, request)
     }
 
     pub fn sync_tsc(&self, timer: &mut GlobalTimer) -> Result<(), drtioaux::Error> {
@@ -302,7 +351,15 @@ impl Repeater {
         Repeater::default()
     }
 
-    pub fn service(&self, _routing_table: &drtio_routing::RoutingTable, _rank: u8, _timer: &mut GlobalTimer) {}
+    pub fn service(
+        &self,
+        _routing_table: &drtio_routing::RoutingTable,
+        _rank: u8,
+        _destination: u8,
+        _router: &mut Router,
+        _timer: &mut GlobalTimer,
+    ) {
+    }
 
     pub fn sync_tsc(&self, _timer: &mut GlobalTimer) -> Result<(), drtioaux::Error> {
         Ok(())

src/satman/src/routing.rs

@@ -0,0 +1,174 @@
+use alloc::{collections::vec_deque::VecDeque, vec::Vec};
+use core::cmp::min;
+
+#[cfg(has_drtio_routing)]
+use libboard_artiq::pl::csr;
+use libboard_artiq::{drtio_routing, drtioaux,
+                     drtioaux_proto::{PayloadStatus, MASTER_PAYLOAD_MAX_SIZE, SAT_PAYLOAD_MAX_SIZE}};
+
+pub struct SliceMeta {
+    pub destination: u8,
+    pub len: u16,
+    pub status: PayloadStatus,
+}
+
+/* represents data that has to be sent to Master */
+#[derive(Debug)]
+pub struct Sliceable {
+    it: usize,
+    data: Vec<u8>,
+    destination: u8,
+}
+
+macro_rules! get_slice_fn {
+    ($name:tt, $size:expr) => {
+        pub fn $name(&mut self, data_slice: &mut [u8; $size]) -> SliceMeta {
+            let first = self.it == 0;
+            let len = min($size, self.data.len() - self.it);
+            let last = self.it + len == self.data.len();
+            let status = PayloadStatus::from_status(first, last);
+
+            data_slice[..len].clone_from_slice(&self.data[self.it..self.it + len]);
+            self.it += len;
+
+            SliceMeta {
+                destination: self.destination,
+                len: len as u16,
+                status: status,
+            }
+        }
+    };
+}
+
+impl Sliceable {
+    pub fn new(destination: u8, data: Vec<u8>) -> Sliceable {
+        Sliceable {
+            it: 0,
+            data: data,
+            destination: destination,
+        }
+    }
+
+    pub fn at_end(&self) -> bool {
+        self.it == self.data.len()
+    }
+
+    pub fn extend(&mut self, data: &[u8]) {
+        self.data.extend(data);
+    }
+
+    get_slice_fn!(get_slice_master, MASTER_PAYLOAD_MAX_SIZE);
+    get_slice_fn!(get_slice_satellite, SAT_PAYLOAD_MAX_SIZE);
+}
+
+// Packets from downstream (further satellites) are received and routed appropriately.
+// they're passed as soon as possible downstream (within the subtree), or sent upstream,
+// which is notified about pending packets.
+// for rank 1 (connected to master) satellites, these packets are passed as an answer to DestinationStatusRequest;
+// for higher ranks, after getting a notification, it will transact with downstream to get the pending packets.
+
+// forward! macro is not deprecated, as routable packets are only these that can originate
+// from both master and satellite, e.g. DDMA and Subkernel.
+
+pub struct Router {
+    upstream_queue: VecDeque<drtioaux::Packet>,
+    local_queue: VecDeque<drtioaux::Packet>,
+    #[cfg(has_drtio_routing)]
+    downstream_queue: VecDeque<(usize, drtioaux::Packet)>,
+}
+
+impl Router {
+    pub fn new() -> Router {
+        Router {
+            upstream_queue: VecDeque::new(),
+            local_queue: VecDeque::new(),
+            #[cfg(has_drtio_routing)]
+            downstream_queue: VecDeque::new(),
+        }
+    }
+
+    // Called by local sources (DDMA, kernel) and by repeaters on receiving async data;
+    // messages are always buffered for both upstream and downstream
+    pub fn route(
+        &mut self,
+        packet: drtioaux::Packet,
+        _routing_table: &drtio_routing::RoutingTable,
+        _rank: u8,
+        self_destination: u8,
+    ) {
+        let destination = packet.routable_destination();
+        #[cfg(has_drtio_routing)]
+        {
+            if let Some(destination) = destination {
+                let hop = _routing_table.0[destination as usize][_rank as usize] as usize;
+                if destination == self_destination {
+                    self.local_queue.push_back(packet);
+                } else if hop > 0 && hop < csr::DRTIOREP.len() {
+                    let repno = (hop - 1) as usize;
+                    self.downstream_queue.push_back((repno, packet));
+                } else {
+                    self.upstream_queue.push_back(packet);
+                }
+            } else {
+                error!("Received an unroutable packet: {:?}", packet);
+            }
+        }
+        #[cfg(not(has_drtio_routing))]
+        {
+            if destination == Some(self_destination) {
+                self.local_queue.push_back(packet);
+            } else {
+                self.upstream_queue.push_back(packet);
+            }
+        }
+    }
+
+    // Sends a packet to a required destination, routing if necessary
+    pub fn send(
+        &mut self,
+        packet: drtioaux::Packet,
+        _routing_table: &drtio_routing::RoutingTable,
+        _rank: u8,
+        _destination: u8,
+    ) -> Result<(), drtioaux::Error> {
+        #[cfg(has_drtio_routing)]
+        {
+            let destination = packet.routable_destination();
+            if let Some(destination) = destination {
+                let hop = _routing_table.0[destination as usize][_rank as usize] as usize;
+                if destination == 0 {
+                    // response is needed immediately if master required it
+                    drtioaux::send(0, &packet)?;
+                } else if !(hop > 0 && hop < csr::DRTIOREP.len()) {
+                    // higher rank can wait
+                    self.upstream_queue.push_back(packet);
+                } else {
+                    let repno = (hop - 1) as usize;
+                    // transaction will occur at closest possible opportunity
+                    self.downstream_queue.push_back((repno, packet));
+                }
+                Ok(())
+            } else {
+                // packet not supported in routing, fallback - sent directly
+                drtioaux::send(0, &packet)
+            }
+        }
+        #[cfg(not(has_drtio_routing))]
+        {
+            drtioaux::send(0, &packet)
+        }
+    }
+
+    pub fn get_upstream_packet(&mut self) -> Option<drtioaux::Packet> {
+        self.upstream_queue.pop_front()
+    }
+
+    #[cfg(has_drtio_routing)]
+    pub fn get_downstream_packet(&mut self) -> Option<(usize, drtioaux::Packet)> {
+        self.downstream_queue.pop_front()
+    }
+
+    pub fn get_local_packet(&mut self) -> Option<drtioaux::Packet> {
+        self.local_queue.pop_front()
+    }
+}

src/satman/src/subkernel.rs

@@ -1,26 +1,55 @@
-use alloc::{collections::{BTreeMap, VecDeque},
+use alloc::{collections::BTreeMap,
             format,
             string::{String, ToString},
             vec::Vec};
-use core::{cmp::min, option::NoneError, slice, str};
+use core::{option::NoneError, slice, str};
 
 use core_io::{Error as IoError, Write};
 use cslice::AsCSlice;
+use dma::{Error as DmaError, Manager as DmaManager};
 use io::{Cursor, ProtoWrite};
-use ksupport::{eh_artiq, kernel, rpc};
-use libboard_artiq::{drtioaux_proto::{MASTER_PAYLOAD_MAX_SIZE, SAT_PAYLOAD_MAX_SIZE},
+use ksupport::{eh_artiq, kernel, rpc, rtio};
+use libboard_artiq::{drtio_routing::RoutingTable,
+                     drtioaux,
+                     drtioaux_proto::{PayloadStatus, MASTER_PAYLOAD_MAX_SIZE},
                      pl::csr};
 use libboard_zynq::{time::Milliseconds, timer::GlobalTimer};
 use libcortex_a9::sync_channel::Receiver;
 use log::warn;
+use routing::{Router, SliceMeta, Sliceable};
 
 #[derive(Debug, Clone, PartialEq)]
 enum KernelState {
     Absent,
     Loaded,
     Running,
-    MsgAwait(Milliseconds, Vec<u8>),
+    MsgAwait {
+        max_time: Option<Milliseconds>,
+        id: u32,
+        tags: Vec<u8>,
+    },
     MsgSending,
+    SubkernelAwaitLoad,
+    SubkernelAwaitFinish {
+        max_time: Option<Milliseconds>,
+        id: u32,
+    },
+    DmaUploading,
+    DmaPendingPlayback {
+        id: u32,
+        timestamp: u64,
+    },
+    DmaPendingAwait {
+        id: u32,
+        timestamp: u64,
+        max_time: Milliseconds,
+    },
+    DmaAwait {
+        max_time: Milliseconds,
+    },
+    SubkernelRetrievingException {
+        destination: u8,
+    },
 }
 
 #[derive(Debug)]
@@ -31,7 +60,9 @@ pub enum Error {
     NoMessage,
     AwaitingMessage,
     SubkernelIoError,
+    DrtioError,
     KernelException(Sliceable),
+    DmaError(DmaError),
 }
 
 impl From<NoneError> for Error {
@@ -46,33 +77,38 @@ impl From<IoError> for Error {
     }
 }
 
+impl From<DmaError> for Error {
+    fn from(value: DmaError) -> Error {
+        Error::DmaError(value)
+    }
+}
+
 impl From<()> for Error {
     fn from(_: ()) -> Error {
         Error::NoMessage
     }
 }
 
+impl From<drtioaux::Error> for Error {
+    fn from(_value: drtioaux::Error) -> Error {
+        Error::DrtioError
+    }
+}
+
 macro_rules! unexpected {
     ($($arg:tt)*) => (return Err(Error::Unexpected(format!($($arg)*))));
 }
 
-/* represents data that has to be sent to Master */
-#[derive(Debug)]
-pub struct Sliceable {
-    it: usize,
-    data: Vec<u8>,
-}
-
 /* represents interkernel messages */
 struct Message {
     count: u8,
+    id: u32,
     data: Vec<u8>,
 }
 
 #[derive(PartialEq)]
 enum OutMessageState {
     NoMessage,
-    MessageReady,
     MessageBeingSent,
     MessageSent,
     MessageAcknowledged,
@@ -82,7 +118,7 @@ enum OutMessageState {
 struct MessageManager {
     out_message: Option<Sliceable>,
     out_state: OutMessageState,
-    in_queue: VecDeque<Message>,
+    in_queue: Vec<Message>,
     in_buffer: Option<Message>,
 }
 
@@ -90,8 +126,11 @@ struct MessageManager {
 struct Session {
     id: u32,
     kernel_state: KernelState,
-    last_exception: Option<Sliceable>,
+    last_exception: Option<Sliceable>,   // exceptions raised locally
+    external_exception: Option<Vec<u8>>, // exceptions from sub-subkernels
     messages: MessageManager,
+    source: u8, // which destination requested running the kernel
+    subkernels_finished: Vec<(u32, Option<u8>)>,
 }
 
 impl Session {
@@ -100,14 +139,17 @@ impl Session {
             id: id,
             kernel_state: KernelState::Absent,
             last_exception: None,
+            external_exception: None,
             messages: MessageManager::new(),
+            source: 0,
+            subkernels_finished: Vec::new(),
         }
     }
 
     fn running(&self) -> bool {
         match self.kernel_state {
             KernelState::Absent | KernelState::Loaded => false,
-            KernelState::Running | KernelState::MsgAwait { .. } | KernelState::MsgSending => true,
+            _ => true,
         }
     }
 }
@@ -129,40 +171,8 @@ pub struct Manager<'a> {
 pub struct SubkernelFinished {
     pub id: u32,
     pub with_exception: bool,
-}
-
-pub struct SliceMeta {
-    pub len: u16,
-    pub last: bool,
-}
-
-macro_rules! get_slice_fn {
-    ($name:tt, $size:expr) => {
-        pub fn $name(&mut self, data_slice: &mut [u8; $size]) -> SliceMeta {
-            if self.data.len() == 0 {
-                return SliceMeta { len: 0, last: true };
-            }
-            let len = min($size, self.data.len() - self.it);
-            let last = self.it + len == self.data.len();
-
-            data_slice[..len].clone_from_slice(&self.data[self.it..self.it + len]);
-            self.it += len;
-
-            SliceMeta {
-                len: len as u16,
-                last: last,
-            }
-        }
-    };
-}
-
-impl Sliceable {
-    pub fn new(data: Vec<u8>) -> Sliceable {
-        Sliceable { it: 0, data: data }
-    }
-
-    get_slice_fn!(get_slice_sat, SAT_PAYLOAD_MAX_SIZE);
-    get_slice_fn!(get_slice_master, MASTER_PAYLOAD_MAX_SIZE);
+    pub exception_source: u8,
+    pub source: u8,
 }
 
 impl MessageManager {
@@ -170,36 +180,35 @@ impl MessageManager {
         MessageManager {
             out_message: None,
             out_state: OutMessageState::NoMessage,
-            in_queue: VecDeque::new(),
+            in_queue: Vec::new(),
             in_buffer: None,
         }
     }
 
-    pub fn handle_incoming(&mut self, last: bool, length: usize, data: &[u8; MASTER_PAYLOAD_MAX_SIZE]) {
+    pub fn handle_incoming(
+        &mut self,
+        status: PayloadStatus,
+        id: u32,
+        length: usize,
+        data: &[u8; MASTER_PAYLOAD_MAX_SIZE],
+    ) {
         // called when receiving a message from master
+        if status.is_first() {
+            self.in_buffer = None;
+        }
         match self.in_buffer.as_mut() {
             Some(message) => message.data.extend(&data[..length]),
             None => {
                 self.in_buffer = Some(Message {
                     count: data[0],
+                    id: id,
                     data: data[1..length].to_vec(),
                 });
             }
         };
-        if last {
+        if status.is_last() {
             // when done, remove from working queue
-            self.in_queue.push_back(self.in_buffer.take().unwrap());
-        }
-    }
-
-    pub fn is_outgoing_ready(&mut self) -> bool {
-        // called by main loop, to see if there's anything to send, will send it afterwards
-        match self.out_state {
-            OutMessageState::MessageReady => {
-                self.out_state = OutMessageState::MessageBeingSent;
-                true
-            }
-            _ => false,
+            self.in_queue.push(self.in_buffer.take().unwrap());
         }
     }
 
@@ -218,7 +227,7 @@ impl MessageManager {
             return None;
         }
         let meta = self.out_message.as_mut()?.get_slice_master(data_slice);
-        if meta.last {
+        if meta.status.is_last() {
             // clear the message slot
             self.out_message = None;
             // notify kernel with a flag that message is sent
@@ -242,15 +251,44 @@ impl MessageManager {
         }
     }
 
-    pub fn accept_outgoing(&mut self, message: Vec<u8>) -> Result<(), Error> {
-        // service tag skipped in kernel
-        self.out_message = Some(Sliceable::new(message));
-        self.out_state = OutMessageState::MessageReady;
+    pub fn accept_outgoing(
+        &mut self,
+        id: u32,
+        self_destination: u8,
+        destination: u8,
+        message: Vec<u8>,
+        routing_table: &RoutingTable,
+        rank: u8,
+        router: &mut Router,
+    ) -> Result<(), Error> {
+        self.out_message = Some(Sliceable::new(destination, message));
+
+        let mut data_slice: [u8; MASTER_PAYLOAD_MAX_SIZE] = [0; MASTER_PAYLOAD_MAX_SIZE];
+        self.out_state = OutMessageState::MessageBeingSent;
+        let meta = self.get_outgoing_slice(&mut data_slice).unwrap();
+        router.route(
+            drtioaux::Packet::SubkernelMessage {
+                source: self_destination,
+                destination: destination,
+                id: id,
+                status: meta.status,
+                length: meta.len as u16,
+                data: data_slice,
+            },
+            routing_table,
+            rank,
+            self_destination,
+        );
         Ok(())
     }
 
-    pub fn get_incoming(&mut self) -> Option<Message> {
-        self.in_queue.pop_front()
+    pub fn get_incoming(&mut self, id: u32) -> Option<Message> {
+        for i in 0..self.in_queue.len() {
+            if self.in_queue[i].id == id {
+                return Some(self.in_queue.remove(i));
+            }
+        }
+        None
     }
 }
 
@@ -265,10 +303,10 @@ impl<'a> Manager<'_> {
         }
     }
 
-    pub fn add(&mut self, id: u32, last: bool, data: &[u8], data_len: usize) -> Result<(), Error> {
+    pub fn add(&mut self, id: u32, status: PayloadStatus, data: &[u8], data_len: usize) -> Result<(), Error> {
         let kernel = match self.kernels.get_mut(&id) {
             Some(kernel) => {
-                if kernel.complete {
+                if kernel.complete || status.is_first() {
                     // replace entry
                     self.kernels.remove(&id);
                     self.kernels.insert(
@@ -296,7 +334,7 @@ impl<'a> Manager<'_> {
         };
         kernel.library.extend(&data[0..data_len]);
 
-        kernel.complete = last;
+        kernel.complete = status.is_last();
         Ok(())
     }
 
@@ -311,25 +349,32 @@ impl<'a> Manager<'_> {
         }
     }
 
-    pub fn run(&mut self, id: u32) -> Result<(), Error> {
-        info!("starting subkernel #{}", id);
+    pub fn run(&mut self, source: u8, id: u32, timestamp: u64) -> Result<(), Error> {
         if self.session.kernel_state != KernelState::Loaded || self.session.id != id {
             self.load(id)?;
         }
         self.session.kernel_state = KernelState::Running;
+        self.session.source = source;
         unsafe {
             csr::cri_con::selected_write(2);
         }
 
+        rtio::at_mu(timestamp as i64);
         self.control.tx.send(kernel::Message::StartRequest);
         Ok(())
     }
 
-    pub fn message_handle_incoming(&mut self, last: bool, length: usize, slice: &[u8; MASTER_PAYLOAD_MAX_SIZE]) {
+    pub fn message_handle_incoming(
+        &mut self,
+        status: PayloadStatus,
+        id: u32,
+        length: usize,
+        slice: &[u8; MASTER_PAYLOAD_MAX_SIZE],
+    ) {
         if !self.running() {
             return;
         }
-        self.session.messages.handle_incoming(last, length, slice);
+        self.session.messages.handle_incoming(status, id, length, slice);
     }
 
     pub fn message_get_slice(&mut self, slice: &mut [u8; MASTER_PAYLOAD_MAX_SIZE]) -> Option<SliceMeta> {
@@ -347,10 +392,6 @@ impl<'a> Manager<'_> {
         self.session.messages.ack_slice()
     }
 
-    pub fn message_is_ready(&mut self) -> bool {
-        self.session.messages.is_outgoing_ready()
-    }
-
     pub fn load(&mut self, id: u32) -> Result<(), Error> {
         if self.session.id == id && self.session.kernel_state == KernelState::Loaded {
             return Ok(());
@@ -375,17 +416,17 @@ impl<'a> Manager<'_> {
         }
     }
 
-    pub fn exception_get_slice(&mut self, data_slice: &mut [u8; SAT_PAYLOAD_MAX_SIZE]) -> SliceMeta {
+    pub fn exception_get_slice(&mut self, data_slice: &mut [u8; MASTER_PAYLOAD_MAX_SIZE]) -> SliceMeta {
         match self.session.last_exception.as_mut() {
-            Some(exception) => exception.get_slice_sat(data_slice),
-            None => SliceMeta { len: 0, last: true },
+            Some(exception) => exception.get_slice_master(data_slice),
+            None => SliceMeta {
+                destination: 0,
+                len: 0,
+                status: PayloadStatus::FirstAndLast,
+            },
         }
     }
 
-    pub fn get_last_finished(&mut self) -> Option<SubkernelFinished> {
-        self.last_finished.take()
-    }
-
     fn kernel_stop(&mut self) {
         self.session.kernel_state = KernelState::Absent;
         unsafe {
@@ -415,18 +456,97 @@ impl<'a> Manager<'_> {
             &[],
             0,
         ) {
-            Ok(_) => self.session.last_exception = Some(Sliceable::new(writer.into_inner())),
+            Ok(_) => self.session.last_exception = Some(Sliceable::new(0, writer.into_inner())),
             Err(_) => error!("Error writing exception data"),
         }
         self.kernel_stop();
     }
 
-    pub fn process_kern_requests(&mut self, rank: u8, timer: GlobalTimer) {
+    pub fn ddma_finished(&mut self, error: u8, channel: u32, timestamp: u64) {
+        if let KernelState::DmaAwait { .. } = self.session.kernel_state {
+            self.control.tx.send(kernel::Message::DmaAwaitRemoteReply {
+                timeout: false,
+                error: error,
+                channel: channel,
+                timestamp: timestamp,
+            });
+            self.session.kernel_state = KernelState::Running;
+        }
+    }
+
+    pub fn ddma_nack(&mut self) {
+        // for simplicity treat it as a timeout...
+        if let KernelState::DmaAwait { .. } = self.session.kernel_state {
+            self.control.tx.send(kernel::Message::DmaAwaitRemoteReply {
+                timeout: true,
+                error: 0,
+                channel: 0,
+                timestamp: 0,
+            });
+            self.session.kernel_state = KernelState::Running;
+        }
+    }
+
+    pub fn ddma_remote_uploaded(&mut self, succeeded: bool) -> Option<(u32, u64)> {
+        // returns a tuple of id, timestamp in case a playback needs to be started immediately
+        if !succeeded {
+            self.kernel_stop();
+            self.runtime_exception(Error::DmaError(DmaError::UploadFail));
+        }
+        let res = match self.session.kernel_state {
+            KernelState::DmaPendingPlayback { id, timestamp } => {
+                self.session.kernel_state = KernelState::Running;
+                Some((id, timestamp))
+            }
+            KernelState::DmaPendingAwait {
+                id,
+                timestamp,
+                max_time,
+            } => {
+                self.session.kernel_state = KernelState::DmaAwait { max_time: max_time };
+                Some((id, timestamp))
+            }
+            KernelState::DmaUploading => {
+                self.session.kernel_state = KernelState::Running;
+                None
+            }
+            _ => None,
+        };
+        res
+    }
+
+    pub fn process_kern_requests(
+        &mut self,
+        router: &mut Router,
+        routing_table: &RoutingTable,
+        rank: u8,
+        destination: u8,
+        dma_manager: &mut DmaManager,
+        timer: &GlobalTimer,
+    ) {
+        if let Some(subkernel_finished) = self.last_finished.take() {
+            info!(
+                "subkernel {} finished, with exception: {}",
+                subkernel_finished.id, subkernel_finished.with_exception
+            );
+            router.route(
+                drtioaux::Packet::SubkernelFinished {
+                    destination: subkernel_finished.source,
+                    id: subkernel_finished.id,
+                    with_exception: subkernel_finished.with_exception,
+                    exception_src: subkernel_finished.exception_source,
+                },
+                &routing_table,
+                rank,
+                destination,
+            );
+        }
+
         if !self.running() {
             return;
         }
 
-        match self.process_external_messages(timer) {
+        match self.process_external_messages(router, routing_table, rank, destination, timer) {
             Ok(()) => (),
             Err(Error::AwaitingMessage) => return, // kernel still waiting, do not process kernel messages
             Err(Error::KernelException(exception)) => {
@@ -434,6 +554,8 @@ impl<'a> Manager<'_> {
                 self.last_finished = Some(SubkernelFinished {
                     id: self.session.id,
                     with_exception: true,
+                    exception_source: destination,
+                    source: self.session.source,
                 });
             }
             Err(e) => {
@@ -442,15 +564,19 @@ impl<'a> Manager<'_> {
                 self.last_finished = Some(SubkernelFinished {
                     id: self.session.id,
                     with_exception: true,
+                    exception_source: destination,
+                    source: self.session.source,
                 });
             }
         }
 
-        match self.process_kern_message(rank, timer) {
+        match self.process_kern_message(router, routing_table, rank, destination, dma_manager, timer) {
             Ok(true) => {
                 self.last_finished = Some(SubkernelFinished {
                     id: self.session.id,
                     with_exception: false,
+                    exception_source: 0,
+                    source: self.session.source,
                 });
             }
             Ok(false) | Err(Error::NoMessage) => (),
@@ -459,6 +585,8 @@ impl<'a> Manager<'_> {
                 self.last_finished = Some(SubkernelFinished {
                     id: self.session.id,
                     with_exception: true,
+                    exception_source: destination,
+                    source: self.session.source,
                 });
             }
             Err(e) => {
@@ -467,16 +595,117 @@ impl<'a> Manager<'_> {
                 self.last_finished = Some(SubkernelFinished {
                     id: self.session.id,
                     with_exception: true,
+                    exception_source: destination,
+                    source: self.session.source,
                 });
             }
         }
     }
 
-    fn process_kern_message(&mut self, rank: u8, timer: GlobalTimer) -> Result<bool, Error> {
+    fn check_finished_kernels(
+        &mut self,
+        id: u32,
+        router: &mut Router,
+        routing_table: &RoutingTable,
+        rank: u8,
+        self_destination: u8,
+    ) {
+        for (i, (status, exception_source)) in self.session.subkernels_finished.iter().enumerate() {
+            if *status == id {
+                if exception_source.is_none() {
+                    self.control.tx.send(kernel::Message::SubkernelAwaitFinishReply);
+                    self.session.kernel_state = KernelState::Running;
+                    self.session.subkernels_finished.swap_remove(i);
+                } else {
+                    let destination = exception_source.unwrap();
+                    self.session.external_exception = Some(Vec::new());
+                    self.session.kernel_state = KernelState::SubkernelRetrievingException {
+                        destination: destination,
+                    };
+                    router.route(
+                        drtioaux::Packet::SubkernelExceptionRequest {
+                            source: self_destination,
+                            destination: destination,
+                        },
+                        &routing_table,
+                        rank,
+                        self_destination,
+                    );
+                }
+                break;
+            }
+        }
+    }
+
+    pub fn subkernel_load_run_reply(&mut self, succeeded: bool) {
+        if self.session.kernel_state == KernelState::SubkernelAwaitLoad {
+            self.control
+                .tx
+                .send(kernel::Message::SubkernelLoadRunReply { succeeded: succeeded });
+            self.session.kernel_state = KernelState::Running;
+        } else {
+            warn!("received unsolicited SubkernelLoadRunReply");
+        }
+    }
+
+    pub fn remote_subkernel_finished(&mut self, id: u32, with_exception: bool, exception_source: u8) {
+        let exception_src = if with_exception { Some(exception_source) } else { None };
+        self.session.subkernels_finished.push((id, exception_src));
+    }
+
+    pub fn received_exception(
+        &mut self,
+        exception_data: &[u8],
+        last: bool,
+        router: &mut Router,
+        routing_table: &RoutingTable,
+        rank: u8,
+        self_destination: u8,
+    ) {
+        if let KernelState::SubkernelRetrievingException { destination } = self.session.kernel_state {
+            self.session
+                .external_exception
+                .as_mut()
+                .unwrap()
+                .extend_from_slice(exception_data);
+            if last {
+                self.control
+                    .tx
+                    .send(kernel::Message::SubkernelError(kernel::SubkernelStatus::Exception(
+                        self.session.external_exception.take().unwrap(),
+                    )));
+                self.session.kernel_state = KernelState::Running;
+            } else {
+                /* fetch another slice */
+                router.route(
+                    drtioaux::Packet::SubkernelExceptionRequest {
+                        source: self_destination,
+                        destination: destination,
+                    },
+                    routing_table,
+                    rank,
+                    self_destination,
+                );
+            }
+        } else {
+            warn!("Received unsolicited exception data");
+        }
+    }
+
+    fn process_kern_message(
+        &mut self,
+        router: &mut Router,
+        routing_table: &RoutingTable,
+        rank: u8,
+        self_destination: u8,
+        dma_manager: &mut DmaManager,
+        timer: &GlobalTimer,
+    ) -> Result<bool, Error> {
         let reply = self.control.rx.try_recv()?;
         match reply {
             kernel::Message::KernelFinished(_async_errors) => {
                 self.kernel_stop();
+                dma_manager.cleanup(router, rank, self_destination, routing_table);
                 return Ok(true);
             }
             kernel::Message::KernelException(exceptions, stack_pointers, backtrace, async_errors) => {
@@ -493,7 +722,7 @@ impl<'a> Manager<'_> {
                     Err(_) => error!("Error writing exception data"),
                 }
                 self.kernel_stop();
-                return Err(Error::KernelException(Sliceable::new(writer.into_inner())));
+                return Err(Error::KernelException(Sliceable::new(0, writer.into_inner())));
             }
             kernel::Message::CachePutRequest(key, value) => {
                 self.cache.insert(key, value);
@@ -503,18 +732,119 @@ impl<'a> Manager<'_> {
                 let value = self.cache.get(&key).unwrap_or(&DEFAULT).clone();
                 self.control.tx.send(kernel::Message::CacheGetReply(value));
             }
-            kernel::Message::SubkernelMsgSend { id: _, data } => {
-                self.session.messages.accept_outgoing(data)?;
+
+            kernel::Message::DmaPutRequest(recorder) => {
+                // ddma is always used on satellites
+                if let Ok(id) = dma_manager.put_record(recorder, self_destination) {
+                    dma_manager.upload_traces(id, router, rank, self_destination, routing_table)?;
+                    self.session.kernel_state = KernelState::DmaUploading;
+                } else {
+                    unexpected!("DMAError: found an unsupported call to RTIO devices on master")
+                }
+            }
+            kernel::Message::DmaEraseRequest(name) => {
+                dma_manager.erase_name(&name, router, rank, self_destination, routing_table);
+            }
+            kernel::Message::DmaGetRequest(name) => {
+                let dma_meta = dma_manager.retrieve(self_destination, &name);
+                self.control.tx.send(kernel::Message::DmaGetReply(dma_meta));
+            }
+            kernel::Message::DmaStartRemoteRequest { id, timestamp } => {
+                if self.session.kernel_state != KernelState::DmaUploading {
+                    dma_manager.playback_remote(
+                        id as u32,
+                        timestamp as u64,
+                        router,
+                        rank,
+                        self_destination,
+                        routing_table,
+                    )?;
+                } else {
+                    self.session.kernel_state = KernelState::DmaPendingPlayback {
+                        id: id as u32,
+                        timestamp: timestamp as u64,
+                    };
+                }
+            }
+            kernel::Message::DmaAwaitRemoteRequest(_id) => {
+                let max_time = timer.get_time() + Milliseconds(10000);
+                self.session.kernel_state = match self.session.kernel_state {
+                    // if we are still waiting for the traces to be uploaded, extend the state by timeout
+                    KernelState::DmaPendingPlayback { id, timestamp } => KernelState::DmaPendingAwait {
+                        id: id,
+                        timestamp: timestamp,
+                        max_time: max_time,
+                    },
+                    _ => KernelState::DmaAwait { max_time: max_time },
+                };
+            }
+
+            kernel::Message::SubkernelMsgSend {
+                id: _id,
+                destination: msg_dest,
+                data,
+            } => {
+                let msg_dest = msg_dest.or(Some(self.session.source)).unwrap();
+                self.session.messages.accept_outgoing(
+                    self.session.id,
+                    self_destination,
+                    msg_dest,
+                    data,
+                    routing_table,
+                    rank,
+                    router,
+                )?;
                 self.session.kernel_state = KernelState::MsgSending;
             }
-            kernel::Message::SubkernelMsgRecvRequest { id: _, timeout, tags } => {
-                let max_time = timer.get_time() + Milliseconds(timeout);
-                self.session.kernel_state = KernelState::MsgAwait(max_time, tags);
+            kernel::Message::SubkernelMsgRecvRequest { id, timeout, tags } => {
+                let id = if id == -1 { self.session.id } else { id as u32 };
+                let max_time = if timeout > 0 {
+                    Some(timer.get_time() + Milliseconds(timeout as u64))
+                } else {
+                    None
+                };
+                self.session.kernel_state = KernelState::MsgAwait {
+                    max_time: max_time,
+                    id: id,
+                    tags: tags,
+                };
+            }
+            kernel::Message::SubkernelLoadRunRequest {
+                id,
+                destination: sk_destination,
+                run,
+                timestamp,
+            } => {
+                self.session.kernel_state = KernelState::SubkernelAwaitLoad;
+                router.route(
+                    drtioaux::Packet::SubkernelLoadRunRequest {
+                        source: self_destination,
+                        destination: sk_destination,
+                        id: id,
+                        run: run,
+                        timestamp,
+                    },
+                    routing_table,
+                    rank,
+                    self_destination,
+                );
+            }
+
+            kernel::Message::SubkernelAwaitFinishRequest { id, timeout } => {
+                let max_time = if timeout > 0 {
+                    Some(timer.get_time() + Milliseconds(timeout as u64))
+                } else {
+                    None
+                };
+                self.session.kernel_state = KernelState::SubkernelAwaitFinish {
+                    max_time: max_time,
+                    id: id,
+                };
             }
             kernel::Message::UpDestinationsRequest(destination) => {
-                self.control
-                    .tx
-                    .send(kernel::Message::UpDestinationsReply(destination == (rank as i32)));
+                self.control.tx.send(kernel::Message::UpDestinationsReply(
+                    destination == (self_destination as i32),
+                ));
             }
             _ => {
                 unexpected!("unexpected message from core1 while kernel was running: {:?}", reply);
@@ -523,26 +853,35 @@ impl<'a> Manager<'_> {
         Ok(false)
     }
 
-    fn process_external_messages(&mut self, timer: GlobalTimer) -> Result<(), Error> {
+    fn process_external_messages(
+        &mut self,
+        router: &mut Router,
+        routing_table: &RoutingTable,
+        rank: u8,
+        self_destination: u8,
+        timer: &GlobalTimer,
+    ) -> Result<(), Error> {
         match &self.session.kernel_state {
-            KernelState::MsgAwait(timeout, tags) => {
-                if timer.get_time() > *timeout {
-                    self.control.tx.send(kernel::Message::SubkernelMsgRecvReply {
-                        status: kernel::SubkernelStatus::Timeout,
-                        count: 0,
-                    });
-                    self.session.kernel_state = KernelState::Running;
-                    return Ok(());
+            KernelState::MsgAwait { max_time, id, tags } => {
+                if let Some(max_time) = *max_time {
+                    if timer.get_time() > max_time {
+                        self.control
+                            .tx
+                            .send(kernel::Message::SubkernelError(kernel::SubkernelStatus::Timeout));
+                        self.session.kernel_state = KernelState::Running;
+                        return Ok(());
+                    }
                 }
-                if let Some(message) = self.session.messages.get_incoming() {
-                    self.control.tx.send(kernel::Message::SubkernelMsgRecvReply {
-                        status: kernel::SubkernelStatus::NoError,
-                        count: message.count,
-                    });
+                if let Some(message) = self.session.messages.get_incoming(*id) {
+                    self.control
+                        .tx
+                        .send(kernel::Message::SubkernelMsgRecvReply { count: message.count });
                     let tags = tags.clone();
                     self.session.kernel_state = KernelState::Running;
                     self.pass_message_to_kernel(&message, tags, timer)
                 } else {
+                    let id = *id;
+                    self.check_finished_kernels(id, router, routing_table, rank, self_destination);
                     Err(Error::AwaitingMessage)
                 }
             }
@@ -555,11 +894,38 @@ impl<'a> Manager<'_> {
                     Err(Error::AwaitingMessage)
                 }
             }
+            KernelState::SubkernelAwaitFinish { max_time, id } => {
+                if let Some(max_time) = *max_time {
+                    if timer.get_time() > max_time {
+                        self.control
+                            .tx
+                            .send(kernel::Message::SubkernelError(kernel::SubkernelStatus::Timeout));
+                        self.session.kernel_state = KernelState::Running;
+                        return Ok(());
+                    }
+                }
+                let id = *id;
+                self.check_finished_kernels(id, router, routing_table, rank, self_destination);
+                Ok(())
+            }
+            KernelState::SubkernelRetrievingException { .. } => Err(Error::AwaitingMessage),
+            KernelState::DmaAwait { max_time } | KernelState::DmaPendingAwait { max_time, .. } => {
+                if timer.get_time() > *max_time {
+                    self.control.tx.send(kernel::Message::DmaAwaitRemoteReply {
+                        timeout: true,
+                        error: 0,
+                        channel: 0,
+                        timestamp: 0,
+                    });
+                    self.session.kernel_state = KernelState::Running;
+                }
+                Ok(())
+            }
             _ => Ok(()),
         }
     }
 
-    fn pass_message_to_kernel(&mut self, message: &Message, tags: Vec<u8>, timer: GlobalTimer) -> Result<(), Error> {
+    fn pass_message_to_kernel(&mut self, message: &Message, tags: Vec<u8>, timer: &GlobalTimer) -> Result<(), Error> {
         let mut reader = Cursor::new(&message.data);
         let mut current_tags: &[u8] = &tags;
         let mut i = message.count;
@@ -582,7 +948,7 @@ impl<'a> Manager<'_> {
                             let mut writer = Cursor::new(buf);
                             match write_exception(&mut writer, exceptions, stack_pointers, backtrace, async_errors) {
                                 Ok(()) => {
-                                    exception = Some(Sliceable::new(writer.into_inner()));
+                                    exception = Some(Sliceable::new(0, writer.into_inner()));
                                 }
                                 Err(_) => {
                                     unexpected = Some("Error writing exception data".to_string());
@@ -676,7 +1042,7 @@ where
 
 fn recv_w_timeout(
     rx: &mut Receiver<'_, kernel::Message>,
-    timer: GlobalTimer,
+    timer: &GlobalTimer,
     timeout: u64,
 ) -> Result<kernel::Message, Error> {
     let max_time = timer.get_time() + Milliseconds(timeout);