forked from M-Labs/nalgebra
Add csr, csc, sparsity_pattern proptest generators (untested)
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@ -4,11 +4,42 @@
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use crate::coo::CooMatrix;
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use proptest::prelude::*;
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use proptest::collection::{vec, hash_map};
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use proptest::collection::{vec, hash_map, btree_set};
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use nalgebra::Scalar;
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use std::cmp::min;
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use std::iter::repeat;
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use std::iter::{repeat};
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use proptest::sample::{Index};
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use crate::csr::CsrMatrix;
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use crate::pattern::SparsityPattern;
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use std::sync::Arc;
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use crate::csc::CscMatrix;
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fn dense_row_major_coord_strategy(nrows: usize, ncols: usize, nnz: usize)
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-> impl Strategy<Value=Vec<(usize, usize)>>
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{
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let mut booleans = vec![true; nnz];
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booleans.append(&mut vec![false; (nrows * ncols) - nnz]);
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// Make sure that exactly `nnz` of the booleans are true
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Just(booleans)
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// Need to shuffle to make sure they are randomly distributed
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.prop_shuffle()
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.prop_map(move |booleans| {
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booleans
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.into_iter()
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.enumerate()
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.filter_map(|(index, is_entry)| {
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if is_entry {
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// Convert linear index to row/col pair
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let i = index / ncols;
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let j = index % ncols;
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Some((i, j))
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} else {
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None
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}
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})
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.collect::<Vec<_>>()
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})
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}
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/// A strategy for generating `nnz` triplets.
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///
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@ -177,4 +208,112 @@ where
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}
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coo
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})
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}
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fn sparsity_pattern_from_row_major_coords<I>(nmajor: usize, nminor: usize, coords: I) -> SparsityPattern
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where
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I: Iterator<Item=(usize, usize)> + ExactSizeIterator,
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{
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let mut minors = Vec::with_capacity(coords.len());
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let mut offsets = Vec::with_capacity(nmajor + 1);
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let mut current_major = 0;
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offsets.push(0);
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for (idx, (i, j)) in coords.enumerate() {
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assert!(i >= current_major);
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assert!(i < nmajor && j < nminor, "Generated coords are out of bounds");
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while current_major < i{
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offsets.push(idx);
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current_major += 1;
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}
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minors.push(j);
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}
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while current_major < nmajor {
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offsets.push(minors.len());
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current_major += 1;
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}
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assert_eq!(offsets.first().unwrap(), &0);
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assert_eq!(offsets.len(), nmajor + 1);
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SparsityPattern::try_from_offsets_and_indices(nmajor,
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nminor,
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offsets,
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minors)
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.expect("Internal error: Generated sparsity pattern is invalid")
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}
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/// TODO
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pub fn sparsity_pattern(
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major_lanes: impl Strategy<Value=usize> + 'static,
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minor_lanes: impl Strategy<Value=usize> + 'static,
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max_nonzeros: usize)
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-> impl Strategy<Value=SparsityPattern>
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{
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(major_lanes, minor_lanes)
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.prop_flat_map(move |(nmajor, nminor)| {
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let max_nonzeros = min(nmajor * nminor, max_nonzeros);
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(Just(nmajor), Just(nminor), 0 ..= max_nonzeros)
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}).prop_flat_map(move |(nmajor, nminor, nnz)| {
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if 10 * nnz < nmajor * nminor {
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// If nnz is small compared to a dense matrix, then use a sparse sampling strategy
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btree_set((0..nmajor, 0..nminor), nnz)
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.prop_map(move |coords| {
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sparsity_pattern_from_row_major_coords(nmajor, nminor, coords.into_iter())
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})
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.boxed()
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} else {
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// If the required number of nonzeros is sufficiently dense,
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// we instead use a dense sampling
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dense_row_major_coord_strategy(nmajor, nminor, nnz)
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.prop_map(move |triplets| {
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let coords = triplets.into_iter();
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sparsity_pattern_from_row_major_coords(nmajor, nminor, coords)
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}).boxed()
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}
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})
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}
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/// TODO
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pub fn csr<T>(value_strategy: T,
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rows: impl Strategy<Value=usize> + 'static,
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cols: impl Strategy<Value=usize> + 'static,
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max_nonzeros: usize)
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-> impl Strategy<Value=CsrMatrix<T::Value>>
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where
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T: Strategy + Clone + 'static,
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T::Value: Scalar,
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{
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sparsity_pattern(rows, cols, max_nonzeros)
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.prop_flat_map(move |pattern| {
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let nnz = pattern.nnz();
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let values = vec![value_strategy.clone(); nnz];
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(Just(pattern), values)
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})
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.prop_map(|(pattern, values)| {
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CsrMatrix::try_from_pattern_and_values(Arc::new(pattern), values)
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.expect("Internal error: Generated CsrMatrix is invalid")
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})
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}
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/// TODO
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pub fn csc<T>(value_strategy: T,
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rows: impl Strategy<Value=usize> + 'static,
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cols: impl Strategy<Value=usize> + 'static,
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max_nonzeros: usize)
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-> impl Strategy<Value=CscMatrix<T::Value>>
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where
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T: Strategy + Clone + 'static,
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T::Value: Scalar,
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{
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sparsity_pattern(cols, rows, max_nonzeros)
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.prop_flat_map(move |pattern| {
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let nnz = pattern.nnz();
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let values = vec![value_strategy.clone(); nnz];
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(Just(pattern), values)
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})
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.prop_map(|(pattern, values)| {
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CscMatrix::try_from_pattern_and_values(Arc::new(pattern), values)
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.expect("Internal error: Generated CscMatrix is invalid")
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})
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}
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@ -131,4 +131,6 @@ mod slow {
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// is contained in the set of visited matrices
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assert!(all_combinations.is_subset(&visited_combinations));
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}
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}
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}
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// TODO: Tests for csr, csc and sparsity_pattern strategies
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