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browser: support datasets that use h5 group notation

Signed-off-by: Leon Riesebos <leon.riesebos@duke.edu>
This commit is contained in:
Leon Riesebos 2022-04-05 23:47:49 -04:00 committed by Sebastien Bourdeauducq
parent b5dc9fd640
commit 386391e3f9
1 changed files with 16 additions and 7 deletions

View File

@ -188,15 +188,24 @@ class FilesDock(QtWidgets.QDockWidget):
except:
logger.warning("unable to read metadata from %s",
info.filePath(), exc_info=True)
rd = dict()
rd = {}
if "archive" in f:
rd = {k: (True, v[()]) for k, v in f["archive"].items()}
def visitor(k, v):
if isinstance(v, h5py.Dataset):
rd[k] = (True, v[()])
f["archive"].visititems(visitor)
if "datasets" in f:
for k, v in f["datasets"].items():
if k in rd:
logger.warning("dataset '%s' is both in archive and "
"outputs", k)
rd[k] = (True, v[()])
def visitor(k, v):
if isinstance(v, h5py.Dataset):
if k in rd:
logger.warning("dataset '%s' is both in archive "
"and outputs", k)
rd[k] = (True, v[()])
f["datasets"].visititems(visitor)
self.datasets.init(rd)