forked from M-Labs/nac3
core/ndstrides: implement np_transpose() (no axes argument)
The IRRT implementation knows how to handle axes. But the argument is not in NAC3 yet.
This commit is contained in:
parent
f37b092947
commit
7a7a67b522
|
@ -9,6 +9,7 @@
|
||||||
#include <irrt/ndarray/indexing.hpp>
|
#include <irrt/ndarray/indexing.hpp>
|
||||||
#include <irrt/ndarray/iter.hpp>
|
#include <irrt/ndarray/iter.hpp>
|
||||||
#include <irrt/ndarray/reshape.hpp>
|
#include <irrt/ndarray/reshape.hpp>
|
||||||
|
#include <irrt/ndarray/transpose.hpp>
|
||||||
#include <irrt/original.hpp>
|
#include <irrt/original.hpp>
|
||||||
#include <irrt/range.hpp>
|
#include <irrt/range.hpp>
|
||||||
#include <irrt/slice.hpp>
|
#include <irrt/slice.hpp>
|
|
@ -0,0 +1,155 @@
|
||||||
|
#pragma once
|
||||||
|
|
||||||
|
#include <irrt/int_types.hpp>
|
||||||
|
#include <irrt/ndarray/def.hpp>
|
||||||
|
#include <irrt/slice.hpp>
|
||||||
|
|
||||||
|
/*
|
||||||
|
* Notes on `np.transpose(<array>, <axes>)`
|
||||||
|
*
|
||||||
|
* TODO: `axes`, if specified, can actually contain negative indices,
|
||||||
|
* but it is not documented in numpy.
|
||||||
|
*
|
||||||
|
* Supporting it for now.
|
||||||
|
*/
|
||||||
|
|
||||||
|
namespace
|
||||||
|
{
|
||||||
|
namespace ndarray
|
||||||
|
{
|
||||||
|
namespace transpose
|
||||||
|
{
|
||||||
|
/**
|
||||||
|
* @brief Do assertions on `<axes>` in `np.transpose(<array>, <axes>)`.
|
||||||
|
*
|
||||||
|
* Note that `np.transpose`'s `<axe>` argument is optional. If the argument
|
||||||
|
* is specified but the user, use this function to do assertions on it.
|
||||||
|
*
|
||||||
|
* @param ndims The number of dimensions of `<array>`
|
||||||
|
* @param num_axes Number of elements in `<axes>` as specified by the user.
|
||||||
|
* This should be equal to `ndims`. If not, a "ValueError: axes don't match array" is thrown.
|
||||||
|
* @param axes The user specified `<axes>`.
|
||||||
|
*/
|
||||||
|
template <typename SizeT> void assert_transpose_axes(SizeT ndims, SizeT num_axes, const SizeT *axes)
|
||||||
|
{
|
||||||
|
if (ndims != num_axes)
|
||||||
|
{
|
||||||
|
raise_exception(SizeT, EXN_VALUE_ERROR, "axes don't match array", NO_PARAM, NO_PARAM, NO_PARAM);
|
||||||
|
}
|
||||||
|
|
||||||
|
// TODO: Optimize this
|
||||||
|
bool *axe_specified = (bool *)__builtin_alloca(sizeof(bool) * ndims);
|
||||||
|
for (SizeT i = 0; i < ndims; i++)
|
||||||
|
axe_specified[i] = false;
|
||||||
|
|
||||||
|
for (SizeT i = 0; i < ndims; i++)
|
||||||
|
{
|
||||||
|
SizeT axis = slice::resolve_index_in_length(ndims, axes[i]);
|
||||||
|
if (axis == -1)
|
||||||
|
{
|
||||||
|
// TODO: numpy actually throws a `numpy.exceptions.AxisError`
|
||||||
|
raise_exception(SizeT, EXN_VALUE_ERROR, "axis {0} is out of bounds for array of dimension {1}", axis, ndims,
|
||||||
|
NO_PARAM);
|
||||||
|
}
|
||||||
|
|
||||||
|
if (axe_specified[axis])
|
||||||
|
{
|
||||||
|
raise_exception(SizeT, EXN_VALUE_ERROR, "repeated axis in transpose", NO_PARAM, NO_PARAM, NO_PARAM);
|
||||||
|
}
|
||||||
|
|
||||||
|
axe_specified[axis] = true;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* @brief Create a transpose view of `src_ndarray` and perform proper assertions.
|
||||||
|
*
|
||||||
|
* This function is very similar to doing `dst_ndarray = np.transpose(src_ndarray, <axes>)`.
|
||||||
|
* If `<axes>` is supposed to be `None`, caller can pass in a `nullptr` to `<axes>`.
|
||||||
|
*
|
||||||
|
* The transpose view created is returned by modifying `dst_ndarray`.
|
||||||
|
*
|
||||||
|
* The caller is responsible for setting up `dst_ndarray` before calling this function.
|
||||||
|
* Here is what this function expects from `dst_ndarray` when called:
|
||||||
|
* - `dst_ndarray->data` does not have to be initialized.
|
||||||
|
* - `dst_ndarray->itemsize` does not have to be initialized.
|
||||||
|
* - `dst_ndarray->ndims` must be initialized, must be equal to `src_ndarray->ndims`.
|
||||||
|
* - `dst_ndarray->shape` must be allocated, through it can contain uninitialized values.
|
||||||
|
* - `dst_ndarray->strides` must be allocated, through it can contain uninitialized values.
|
||||||
|
* When this function call ends:
|
||||||
|
* - `dst_ndarray->data` is set to `src_ndarray->data` (`dst_ndarray` is just a view to `src_ndarray`)
|
||||||
|
* - `dst_ndarray->itemsize` is set to `src_ndarray->itemsize`
|
||||||
|
* - `dst_ndarray->ndims` is unchanged
|
||||||
|
* - `dst_ndarray->shape` is updated according to how `np.transpose` works
|
||||||
|
* - `dst_ndarray->strides` is updated according to how `np.transpose` works
|
||||||
|
*
|
||||||
|
* @param src_ndarray The NDArray to build a transpose view on
|
||||||
|
* @param dst_ndarray The resulting NDArray after transpose. Further details in the comments above,
|
||||||
|
* @param num_axes Number of elements in axes. Unused if `axes` is nullptr.
|
||||||
|
* @param axes Axes permutation. Set it to `nullptr` if `<axes>` is `None`.
|
||||||
|
*/
|
||||||
|
template <typename SizeT>
|
||||||
|
void transpose(const NDArray<SizeT> *src_ndarray, NDArray<SizeT> *dst_ndarray, SizeT num_axes, const SizeT *axes)
|
||||||
|
{
|
||||||
|
debug_assert_eq(SizeT, src_ndarray->ndims, dst_ndarray->ndims);
|
||||||
|
const auto ndims = src_ndarray->ndims;
|
||||||
|
|
||||||
|
if (axes != nullptr)
|
||||||
|
assert_transpose_axes(ndims, num_axes, axes);
|
||||||
|
|
||||||
|
dst_ndarray->data = src_ndarray->data;
|
||||||
|
dst_ndarray->itemsize = src_ndarray->itemsize;
|
||||||
|
|
||||||
|
// Check out https://ajcr.net/stride-guide-part-2/ to see how `np.transpose` works behind the scenes.
|
||||||
|
if (axes == nullptr)
|
||||||
|
{
|
||||||
|
// `np.transpose(<array>, axes=None)`
|
||||||
|
|
||||||
|
/*
|
||||||
|
* Minor note: `np.transpose(<array>, axes=None)` is equivalent to
|
||||||
|
* `np.transpose(<array>, axes=[N-1, N-2, ..., 0])` - basically it
|
||||||
|
* is reversing the order of strides and shape.
|
||||||
|
*
|
||||||
|
* This is a fast implementation to handle this special (but very common) case.
|
||||||
|
*/
|
||||||
|
|
||||||
|
for (SizeT axis = 0; axis < ndims; axis++)
|
||||||
|
{
|
||||||
|
dst_ndarray->shape[axis] = src_ndarray->shape[ndims - axis - 1];
|
||||||
|
dst_ndarray->strides[axis] = src_ndarray->strides[ndims - axis - 1];
|
||||||
|
}
|
||||||
|
}
|
||||||
|
else
|
||||||
|
{
|
||||||
|
// `np.transpose(<array>, <axes>)`
|
||||||
|
|
||||||
|
// Permute strides and shape according to `axes`, while resolving negative indices in `axes`
|
||||||
|
for (SizeT axis = 0; axis < ndims; axis++)
|
||||||
|
{
|
||||||
|
// `i` cannot be OUT_OF_BOUNDS because of assertions
|
||||||
|
SizeT i = slice::resolve_index_in_length(ndims, axes[axis]);
|
||||||
|
|
||||||
|
dst_ndarray->shape[axis] = src_ndarray->shape[i];
|
||||||
|
dst_ndarray->strides[axis] = src_ndarray->strides[i];
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
} // namespace transpose
|
||||||
|
} // namespace ndarray
|
||||||
|
} // namespace
|
||||||
|
|
||||||
|
extern "C"
|
||||||
|
{
|
||||||
|
using namespace ndarray::transpose;
|
||||||
|
void __nac3_ndarray_transpose(const NDArray<int32_t> *src_ndarray, NDArray<int32_t> *dst_ndarray, int32_t num_axes,
|
||||||
|
const int32_t *axes)
|
||||||
|
{
|
||||||
|
transpose(src_ndarray, dst_ndarray, num_axes, axes);
|
||||||
|
}
|
||||||
|
|
||||||
|
void __nac3_ndarray_transpose64(const NDArray<int64_t> *src_ndarray, NDArray<int64_t> *dst_ndarray,
|
||||||
|
int64_t num_axes, const int64_t *axes)
|
||||||
|
{
|
||||||
|
transpose(src_ndarray, dst_ndarray, num_axes, axes);
|
||||||
|
}
|
||||||
|
}
|
|
@ -1214,3 +1214,20 @@ pub fn call_nac3_ndarray_broadcast_shapes<'ctx, G: CodeGenerator + ?Sized>(
|
||||||
.arg(dst_shape)
|
.arg(dst_shape)
|
||||||
.returning_void();
|
.returning_void();
|
||||||
}
|
}
|
||||||
|
|
||||||
|
pub fn call_nac3_ndarray_transpose<'ctx, G: CodeGenerator + ?Sized>(
|
||||||
|
generator: &mut G,
|
||||||
|
ctx: &mut CodeGenContext<'ctx, '_>,
|
||||||
|
src_ndarray: Instance<'ctx, Ptr<Struct<NDArray>>>,
|
||||||
|
dst_ndarray: Instance<'ctx, Ptr<Struct<NDArray>>>,
|
||||||
|
num_axes: Instance<'ctx, Int<SizeT>>,
|
||||||
|
axes: Instance<'ctx, Ptr<Int<SizeT>>>,
|
||||||
|
) {
|
||||||
|
let name = get_sizet_dependent_function_name(generator, ctx, "__nac3_ndarray_transpose");
|
||||||
|
CallFunction::begin(generator, ctx, &name)
|
||||||
|
.arg(src_ndarray)
|
||||||
|
.arg(dst_ndarray)
|
||||||
|
.arg(num_axes)
|
||||||
|
.arg(axes)
|
||||||
|
.returning_void();
|
||||||
|
}
|
||||||
|
|
|
@ -1990,112 +1990,6 @@ pub fn gen_ndarray_fill<'ctx>(
|
||||||
Ok(())
|
Ok(())
|
||||||
}
|
}
|
||||||
|
|
||||||
/// Generates LLVM IR for `ndarray.transpose`.
|
|
||||||
pub fn ndarray_transpose<'ctx, G: CodeGenerator + ?Sized>(
|
|
||||||
generator: &mut G,
|
|
||||||
ctx: &mut CodeGenContext<'ctx, '_>,
|
|
||||||
x1: (Type, BasicValueEnum<'ctx>),
|
|
||||||
) -> Result<BasicValueEnum<'ctx>, String> {
|
|
||||||
const FN_NAME: &str = "ndarray_transpose";
|
|
||||||
let (x1_ty, x1) = x1;
|
|
||||||
let llvm_usize = generator.get_size_type(ctx.ctx);
|
|
||||||
|
|
||||||
if let BasicValueEnum::PointerValue(n1) = x1 {
|
|
||||||
let (elem_ty, _) = unpack_ndarray_var_tys(&mut ctx.unifier, x1_ty);
|
|
||||||
let n1 = NDArrayValue::from_ptr_val(n1, llvm_usize, None);
|
|
||||||
let n_sz = call_ndarray_calc_size(generator, ctx, &n1.dim_sizes(), (None, None));
|
|
||||||
|
|
||||||
// Dimensions are reversed in the transposed array
|
|
||||||
let out = create_ndarray_dyn_shape(
|
|
||||||
generator,
|
|
||||||
ctx,
|
|
||||||
elem_ty,
|
|
||||||
&n1,
|
|
||||||
|_, ctx, n| Ok(n.load_ndims(ctx)),
|
|
||||||
|generator, ctx, n, idx| {
|
|
||||||
let new_idx = ctx.builder.build_int_sub(n.load_ndims(ctx), idx, "").unwrap();
|
|
||||||
let new_idx = ctx
|
|
||||||
.builder
|
|
||||||
.build_int_sub(new_idx, new_idx.get_type().const_int(1, false), "")
|
|
||||||
.unwrap();
|
|
||||||
unsafe { Ok(n.dim_sizes().get_typed_unchecked(ctx, generator, &new_idx, None)) }
|
|
||||||
},
|
|
||||||
)
|
|
||||||
.unwrap();
|
|
||||||
|
|
||||||
gen_for_callback_incrementing(
|
|
||||||
generator,
|
|
||||||
ctx,
|
|
||||||
None,
|
|
||||||
llvm_usize.const_zero(),
|
|
||||||
(n_sz, false),
|
|
||||||
|generator, ctx, _, idx| {
|
|
||||||
let elem = unsafe { n1.data().get_unchecked(ctx, generator, &idx, None) };
|
|
||||||
|
|
||||||
let new_idx = generator.gen_var_alloc(ctx, llvm_usize.into(), None)?;
|
|
||||||
let rem_idx = generator.gen_var_alloc(ctx, llvm_usize.into(), None)?;
|
|
||||||
ctx.builder.build_store(new_idx, llvm_usize.const_zero()).unwrap();
|
|
||||||
ctx.builder.build_store(rem_idx, idx).unwrap();
|
|
||||||
|
|
||||||
// Incrementally calculate the new index in the transposed array
|
|
||||||
// For each index, we first decompose it into the n-dims and use those to reconstruct the new index
|
|
||||||
// The formula used for indexing is:
|
|
||||||
// idx = dim_n * ( ... (dim2 * (dim0 * dim1) + dim1) + dim2 ... ) + dim_n
|
|
||||||
gen_for_callback_incrementing(
|
|
||||||
generator,
|
|
||||||
ctx,
|
|
||||||
None,
|
|
||||||
llvm_usize.const_zero(),
|
|
||||||
(n1.load_ndims(ctx), false),
|
|
||||||
|generator, ctx, _, ndim| {
|
|
||||||
let ndim_rev =
|
|
||||||
ctx.builder.build_int_sub(n1.load_ndims(ctx), ndim, "").unwrap();
|
|
||||||
let ndim_rev = ctx
|
|
||||||
.builder
|
|
||||||
.build_int_sub(ndim_rev, llvm_usize.const_int(1, false), "")
|
|
||||||
.unwrap();
|
|
||||||
let dim = unsafe {
|
|
||||||
n1.dim_sizes().get_typed_unchecked(ctx, generator, &ndim_rev, None)
|
|
||||||
};
|
|
||||||
|
|
||||||
let rem_idx_val =
|
|
||||||
ctx.builder.build_load(rem_idx, "").unwrap().into_int_value();
|
|
||||||
let new_idx_val =
|
|
||||||
ctx.builder.build_load(new_idx, "").unwrap().into_int_value();
|
|
||||||
|
|
||||||
let add_component =
|
|
||||||
ctx.builder.build_int_unsigned_rem(rem_idx_val, dim, "").unwrap();
|
|
||||||
let rem_idx_val =
|
|
||||||
ctx.builder.build_int_unsigned_div(rem_idx_val, dim, "").unwrap();
|
|
||||||
|
|
||||||
let new_idx_val = ctx.builder.build_int_mul(new_idx_val, dim, "").unwrap();
|
|
||||||
let new_idx_val =
|
|
||||||
ctx.builder.build_int_add(new_idx_val, add_component, "").unwrap();
|
|
||||||
|
|
||||||
ctx.builder.build_store(rem_idx, rem_idx_val).unwrap();
|
|
||||||
ctx.builder.build_store(new_idx, new_idx_val).unwrap();
|
|
||||||
|
|
||||||
Ok(())
|
|
||||||
},
|
|
||||||
llvm_usize.const_int(1, false),
|
|
||||||
)?;
|
|
||||||
|
|
||||||
let new_idx_val = ctx.builder.build_load(new_idx, "").unwrap().into_int_value();
|
|
||||||
unsafe { out.data().set_unchecked(ctx, generator, &new_idx_val, elem) };
|
|
||||||
Ok(())
|
|
||||||
},
|
|
||||||
llvm_usize.const_int(1, false),
|
|
||||||
)?;
|
|
||||||
|
|
||||||
Ok(out.as_base_value().into())
|
|
||||||
} else {
|
|
||||||
unreachable!(
|
|
||||||
"{FN_NAME}() not supported for '{}'",
|
|
||||||
format!("'{}'", ctx.unifier.stringify(x1_ty))
|
|
||||||
)
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
/// Generates LLVM IR for `ndarray.dot`.
|
/// Generates LLVM IR for `ndarray.dot`.
|
||||||
/// Calculate inner product of two vectors or literals
|
/// Calculate inner product of two vectors or literals
|
||||||
/// For matrix multiplication use `np_matmul`
|
/// For matrix multiplication use `np_matmul`
|
||||||
|
|
|
@ -1,6 +1,7 @@
|
||||||
use crate::codegen::{
|
use crate::codegen::{
|
||||||
irrt::call_nac3_ndarray_reshape_resolve_and_check_new_shape, model::*, CodeGenContext,
|
irrt::{call_nac3_ndarray_reshape_resolve_and_check_new_shape, call_nac3_ndarray_transpose},
|
||||||
CodeGenerator,
|
model::*,
|
||||||
|
CodeGenContext, CodeGenerator,
|
||||||
};
|
};
|
||||||
|
|
||||||
use super::{indexing::RustNDIndex, NDArrayObject};
|
use super::{indexing::RustNDIndex, NDArrayObject};
|
||||||
|
@ -86,4 +87,33 @@ impl<'ctx> NDArrayObject<'ctx> {
|
||||||
|
|
||||||
dst_ndarray
|
dst_ndarray
|
||||||
}
|
}
|
||||||
|
|
||||||
|
/// Create a transposed view on this ndarray like `np.transpose(<ndarray>, <axes> = None)`.
|
||||||
|
/// * `axes` - If specified, should be an array of the permutation (negative indices are **allowed**).
|
||||||
|
#[must_use]
|
||||||
|
pub fn transpose<G: CodeGenerator + ?Sized>(
|
||||||
|
&self,
|
||||||
|
generator: &mut G,
|
||||||
|
ctx: &mut CodeGenContext<'ctx, '_>,
|
||||||
|
axes: Option<Instance<'ctx, Ptr<Int<SizeT>>>>,
|
||||||
|
) -> Self {
|
||||||
|
// Define models
|
||||||
|
let transposed_ndarray = NDArrayObject::alloca(generator, ctx, self.dtype, self.ndims);
|
||||||
|
|
||||||
|
let num_axes = self.ndims_llvm(generator, ctx.ctx);
|
||||||
|
|
||||||
|
// `axes = nullptr` if `axes` is unspecified.
|
||||||
|
let axes = axes.unwrap_or_else(|| Ptr(Int(SizeT)).nullptr(generator, ctx.ctx));
|
||||||
|
|
||||||
|
call_nac3_ndarray_transpose(
|
||||||
|
generator,
|
||||||
|
ctx,
|
||||||
|
self.instance,
|
||||||
|
transposed_ndarray.instance,
|
||||||
|
num_axes,
|
||||||
|
axes,
|
||||||
|
);
|
||||||
|
|
||||||
|
transposed_ndarray
|
||||||
|
}
|
||||||
}
|
}
|
||||||
|
|
|
@ -1481,18 +1481,26 @@ impl<'a> BuiltinBuilder<'a> {
|
||||||
);
|
);
|
||||||
|
|
||||||
match prim {
|
match prim {
|
||||||
PrimDef::FunNpTranspose => create_fn_by_codegen(
|
PrimDef::FunNpTranspose => {
|
||||||
self.unifier,
|
create_fn_by_codegen(
|
||||||
&into_var_map([in_ndarray_ty]),
|
self.unifier,
|
||||||
prim.name(),
|
&into_var_map([in_ndarray_ty]),
|
||||||
in_ndarray_ty.ty,
|
prim.name(),
|
||||||
&[(in_ndarray_ty.ty, "x")],
|
in_ndarray_ty.ty,
|
||||||
Box::new(move |ctx, _, fun, args, generator| {
|
&[(in_ndarray_ty.ty, "x")],
|
||||||
let arg_ty = fun.0.args[0].ty;
|
Box::new(move |ctx, _, fun, args, generator| {
|
||||||
let arg_val = args[0].1.clone().to_basic_value_enum(ctx, generator, arg_ty)?;
|
let arg_ty = fun.0.args[0].ty;
|
||||||
Ok(Some(ndarray_transpose(generator, ctx, (arg_ty, arg_val))?))
|
let arg_val =
|
||||||
}),
|
args[0].1.clone().to_basic_value_enum(ctx, generator, arg_ty)?;
|
||||||
),
|
|
||||||
|
let arg = AnyObject { ty: arg_ty, value: arg_val };
|
||||||
|
let ndarray = NDArrayObject::from_object(generator, ctx, arg);
|
||||||
|
|
||||||
|
let ndarray = ndarray.transpose(generator, ctx, None); // TODO: Add axes argument
|
||||||
|
Ok(Some(ndarray.instance.value.as_basic_value_enum()))
|
||||||
|
}),
|
||||||
|
)
|
||||||
|
}
|
||||||
|
|
||||||
// NOTE: on `ndarray_factory_fn_shape_arg_tvar` and
|
// NOTE: on `ndarray_factory_fn_shape_arg_tvar` and
|
||||||
// the `param_ty` for `create_fn_by_codegen`.
|
// the `param_ty` for `create_fn_by_codegen`.
|
||||||
|
|
Loading…
Reference in New Issue