#[cfg(feature = "serde-serialize")] use serde::{Deserialize, Serialize}; use approx::AbsDiffEq; use num::{One, Zero}; use crate::allocator::Allocator; use crate::base::{DefaultAllocator, Matrix, Matrix2x3, MatrixMN, Vector2, VectorN}; use crate::constraint::{SameNumberOfRows, ShapeConstraint}; use crate::dimension::{Dim, DimDiff, DimMin, DimMinimum, DimSub, U1, U2}; use crate::storage::Storage; use simba::scalar::{ComplexField, RealField}; use crate::linalg::givens::GivensRotation; use crate::linalg::symmetric_eigen; use crate::linalg::Bidiagonal; /// Singular Value Decomposition of a general matrix. #[cfg_attr(feature = "serde-serialize", derive(Serialize, Deserialize))] #[cfg_attr( feature = "serde-serialize", serde(bound( serialize = "DefaultAllocator: Allocator> + Allocator, C> + Allocator>, MatrixMN>: Serialize, MatrixMN, C>: Serialize, VectorN>: Serialize" )) )] #[cfg_attr( feature = "serde-serialize", serde(bound( deserialize = "DefaultAllocator: Allocator> + Allocator, C> + Allocator>, MatrixMN>: Deserialize<'de>, MatrixMN, C>: Deserialize<'de>, VectorN>: Deserialize<'de>" )) )] #[derive(Clone, Debug)] pub struct SVD, C: Dim> where DefaultAllocator: Allocator, C> + Allocator> + Allocator>, { /// The left-singular vectors `U` of this SVD. pub u: Option>>, /// The right-singular vectors `V^t` of this SVD. pub v_t: Option, C>>, /// The singular values of this SVD. pub singular_values: VectorN>, } impl, C: Dim> Copy for SVD where DefaultAllocator: Allocator, C> + Allocator> + Allocator>, MatrixMN>: Copy, MatrixMN, C>: Copy, VectorN>: Copy, { } impl, C: Dim> SVD where DimMinimum: DimSub, // for Bidiagonal. DefaultAllocator: Allocator + Allocator + Allocator + Allocator, U1>> + Allocator, C> + Allocator> + Allocator> + Allocator> + Allocator, U1>>, { /// Computes the Singular Value Decomposition of `matrix` using implicit shift. pub fn new(matrix: MatrixMN, compute_u: bool, compute_v: bool) -> Self { Self::try_new( matrix, compute_u, compute_v, N::RealField::default_epsilon(), 0, ) .unwrap() } /// Attempts to compute the Singular Value Decomposition of `matrix` using implicit shift. /// /// # Arguments /// /// * `compute_u` − set this to `true` to enable the computation of left-singular vectors. /// * `compute_v` − set this to `true` to enable the computation of right-singular vectors. /// * `eps` − tolerance used to determine when a value converged to 0. /// * `max_niter` − maximum total number of iterations performed by the algorithm. If this /// number of iteration is exceeded, `None` is returned. If `niter == 0`, then the algorithm /// continues indefinitely until convergence. pub fn try_new( mut matrix: MatrixMN, compute_u: bool, compute_v: bool, eps: N::RealField, max_niter: usize, ) -> Option { assert!( matrix.len() != 0, "Cannot compute the SVD of an empty matrix." ); let (nrows, ncols) = matrix.data.shape(); let min_nrows_ncols = nrows.min(ncols); let dim = min_nrows_ncols.value(); let m_amax = matrix.camax(); if !m_amax.is_zero() { matrix.unscale_mut(m_amax); } let b = Bidiagonal::new(matrix); let mut u = if compute_u { Some(b.u()) } else { None }; let mut v_t = if compute_v { Some(b.v_t()) } else { None }; let mut diagonal = b.diagonal(); let mut off_diagonal = b.off_diagonal(); let mut niter = 0; let (mut start, mut end) = Self::delimit_subproblem( &mut diagonal, &mut off_diagonal, &mut u, &mut v_t, b.is_upper_diagonal(), dim - 1, eps, ); while end != start { let subdim = end - start + 1; // Solve the subproblem. if subdim > 2 { let m = end - 1; let n = end; let mut vec; { let dm = diagonal[m]; let dn = diagonal[n]; let fm = off_diagonal[m]; let tmm = dm * dm + off_diagonal[m - 1] * off_diagonal[m - 1]; let tmn = dm * fm; let tnn = dn * dn + fm * fm; let shift = symmetric_eigen::wilkinson_shift(tmm, tnn, tmn); vec = Vector2::new( diagonal[start] * diagonal[start] - shift, diagonal[start] * off_diagonal[start], ); } for k in start..n { let m12 = if k == n - 1 { N::RealField::zero() } else { off_diagonal[k + 1] }; let mut subm = Matrix2x3::new( diagonal[k], off_diagonal[k], N::RealField::zero(), N::RealField::zero(), diagonal[k + 1], m12, ); if let Some((rot1, norm1)) = GivensRotation::cancel_y(&vec) { rot1.inverse() .rotate_rows(&mut subm.fixed_columns_mut::(0)); let rot1 = GivensRotation::new_unchecked(rot1.c(), N::from_real(rot1.s())); if k > start { // This is not the first iteration. off_diagonal[k - 1] = norm1; } let v = Vector2::new(subm[(0, 0)], subm[(1, 0)]); // FIXME: does the case `v.y == 0` ever happen? let (rot2, norm2) = GivensRotation::cancel_y(&v) .unwrap_or((GivensRotation::identity(), subm[(0, 0)])); rot2.rotate(&mut subm.fixed_columns_mut::(1)); let rot2 = GivensRotation::new_unchecked(rot2.c(), N::from_real(rot2.s())); subm[(0, 0)] = norm2; if let Some(ref mut v_t) = v_t { if b.is_upper_diagonal() { rot1.rotate(&mut v_t.fixed_rows_mut::(k)); } else { rot2.rotate(&mut v_t.fixed_rows_mut::(k)); } } if let Some(ref mut u) = u { if b.is_upper_diagonal() { rot2.inverse() .rotate_rows(&mut u.fixed_columns_mut::(k)); } else { rot1.inverse() .rotate_rows(&mut u.fixed_columns_mut::(k)); } } diagonal[k] = subm[(0, 0)]; diagonal[k + 1] = subm[(1, 1)]; off_diagonal[k] = subm[(0, 1)]; if k != n - 1 { off_diagonal[k + 1] = subm[(1, 2)]; } vec.x = subm[(0, 1)]; vec.y = subm[(0, 2)]; } else { break; } } } else if subdim == 2 { // Solve the remaining 2x2 subproblem. let (u2, s, v2) = compute_2x2_uptrig_svd( diagonal[start], off_diagonal[start], diagonal[start + 1], compute_u && b.is_upper_diagonal() || compute_v && !b.is_upper_diagonal(), compute_v && b.is_upper_diagonal() || compute_u && !b.is_upper_diagonal(), ); let u2 = u2.map(|u2| GivensRotation::new_unchecked(u2.c(), N::from_real(u2.s()))); let v2 = v2.map(|v2| GivensRotation::new_unchecked(v2.c(), N::from_real(v2.s()))); diagonal[start] = s[0]; diagonal[start + 1] = s[1]; off_diagonal[start] = N::RealField::zero(); if let Some(ref mut u) = u { let rot = if b.is_upper_diagonal() { u2.unwrap() } else { v2.unwrap() }; rot.rotate_rows(&mut u.fixed_columns_mut::(start)); } if let Some(ref mut v_t) = v_t { let rot = if b.is_upper_diagonal() { v2.unwrap() } else { u2.unwrap() }; rot.inverse().rotate(&mut v_t.fixed_rows_mut::(start)); } end -= 1; } // Re-delimit the subproblem in case some decoupling occurred. let sub = Self::delimit_subproblem( &mut diagonal, &mut off_diagonal, &mut u, &mut v_t, b.is_upper_diagonal(), end, eps, ); start = sub.0; end = sub.1; niter += 1; if niter == max_niter { return None; } } diagonal *= m_amax; // Ensure all singular value are non-negative. for i in 0..dim { let sval = diagonal[i]; if sval < N::RealField::zero() { diagonal[i] = -sval; if let Some(ref mut u) = u { u.column_mut(i).neg_mut(); } } } Some(Self { u, v_t, singular_values: diagonal, }) } /* fn display_bidiag(b: &Bidiagonal, begin: usize, end: usize) { for i in begin .. end { for k in begin .. i { print!(" "); } println!("{} {}", b.diagonal[i], b.off_diagonal[i]); } for k in begin .. end { print!(" "); } println!("{}", b.diagonal[end]); } */ fn delimit_subproblem( diagonal: &mut VectorN>, off_diagonal: &mut VectorN, U1>>, u: &mut Option>>, v_t: &mut Option, C>>, is_upper_diagonal: bool, end: usize, eps: N::RealField, ) -> (usize, usize) { let mut n = end; while n > 0 { let m = n - 1; if off_diagonal[m].is_zero() || off_diagonal[m].norm1() <= eps * (diagonal[n].norm1() + diagonal[m].norm1()) { off_diagonal[m] = N::RealField::zero(); } else if diagonal[m].norm1() <= eps { diagonal[m] = N::RealField::zero(); Self::cancel_horizontal_off_diagonal_elt( diagonal, off_diagonal, u, v_t, is_upper_diagonal, m, m + 1, ); if m != 0 { Self::cancel_vertical_off_diagonal_elt( diagonal, off_diagonal, u, v_t, is_upper_diagonal, m - 1, ); } } else if diagonal[n].norm1() <= eps { diagonal[n] = N::RealField::zero(); Self::cancel_vertical_off_diagonal_elt( diagonal, off_diagonal, u, v_t, is_upper_diagonal, m, ); } else { break; } n -= 1; } if n == 0 { return (0, 0); } let mut new_start = n - 1; while new_start > 0 { let m = new_start - 1; if off_diagonal[m].norm1() <= eps * (diagonal[new_start].norm1() + diagonal[m].norm1()) { off_diagonal[m] = N::RealField::zero(); break; } // FIXME: write a test that enters this case. else if diagonal[m].norm1() <= eps { diagonal[m] = N::RealField::zero(); Self::cancel_horizontal_off_diagonal_elt( diagonal, off_diagonal, u, v_t, is_upper_diagonal, m, n, ); if m != 0 { Self::cancel_vertical_off_diagonal_elt( diagonal, off_diagonal, u, v_t, is_upper_diagonal, m - 1, ); } break; } new_start -= 1; } (new_start, n) } // Cancels the i-th off-diagonal element using givens rotations. fn cancel_horizontal_off_diagonal_elt( diagonal: &mut VectorN>, off_diagonal: &mut VectorN, U1>>, u: &mut Option>>, v_t: &mut Option, C>>, is_upper_diagonal: bool, i: usize, end: usize, ) { let mut v = Vector2::new(off_diagonal[i], diagonal[i + 1]); off_diagonal[i] = N::RealField::zero(); for k in i..end { if let Some((rot, norm)) = GivensRotation::cancel_x(&v) { let rot = GivensRotation::new_unchecked(rot.c(), N::from_real(rot.s())); diagonal[k + 1] = norm; if is_upper_diagonal { if let Some(ref mut u) = *u { rot.inverse() .rotate_rows(&mut u.fixed_columns_with_step_mut::(i, k - i)); } } else if let Some(ref mut v_t) = *v_t { rot.rotate(&mut v_t.fixed_rows_with_step_mut::(i, k - i)); } if k + 1 != end { v.x = -rot.s().real() * off_diagonal[k + 1]; v.y = diagonal[k + 2]; off_diagonal[k + 1] *= rot.c(); } } else { break; } } } // Cancels the i-th off-diagonal element using givens rotations. fn cancel_vertical_off_diagonal_elt( diagonal: &mut VectorN>, off_diagonal: &mut VectorN, U1>>, u: &mut Option>>, v_t: &mut Option, C>>, is_upper_diagonal: bool, i: usize, ) { let mut v = Vector2::new(diagonal[i], off_diagonal[i]); off_diagonal[i] = N::RealField::zero(); for k in (0..i + 1).rev() { if let Some((rot, norm)) = GivensRotation::cancel_y(&v) { let rot = GivensRotation::new_unchecked(rot.c(), N::from_real(rot.s())); diagonal[k] = norm; if is_upper_diagonal { if let Some(ref mut v_t) = *v_t { rot.rotate(&mut v_t.fixed_rows_with_step_mut::(k, i - k)); } } else if let Some(ref mut u) = *u { rot.inverse() .rotate_rows(&mut u.fixed_columns_with_step_mut::(k, i - k)); } if k > 0 { v.x = diagonal[k - 1]; v.y = rot.s().real() * off_diagonal[k - 1]; off_diagonal[k - 1] *= rot.c(); } } else { break; } } } /// Computes the rank of the decomposed matrix, i.e., the number of singular values greater /// than `eps`. pub fn rank(&self, eps: N::RealField) -> usize { assert!( eps >= N::RealField::zero(), "SVD rank: the epsilon must be non-negative." ); self.singular_values.iter().filter(|e| **e > eps).count() } /// Rebuild the original matrix. /// /// This is useful if some of the singular values have been manually modified. /// Returns `Err` if the right- and left- singular vectors have not been /// computed at construction-time. pub fn recompose(self) -> Result, &'static str> { match (self.u, self.v_t) { (Some(mut u), Some(v_t)) => { for i in 0..self.singular_values.len() { let val = self.singular_values[i]; u.column_mut(i).scale_mut(val); } Ok(u * v_t) } (None, None) => Err("SVD recomposition: U and V^t have not been computed."), (None, _) => Err("SVD recomposition: U has not been computed."), (_, None) => Err("SVD recomposition: V^t has not been computed."), } } /// Computes the pseudo-inverse of the decomposed matrix. /// /// Any singular value smaller than `eps` is assumed to be zero. /// Returns `Err` if the right- and left- singular vectors have not /// been computed at construction-time. pub fn pseudo_inverse(mut self, eps: N::RealField) -> Result, &'static str> where DefaultAllocator: Allocator, { if eps < N::RealField::zero() { Err("SVD pseudo inverse: the epsilon must be non-negative.") } else { for i in 0..self.singular_values.len() { let val = self.singular_values[i]; if val > eps { self.singular_values[i] = N::RealField::one() / val; } else { self.singular_values[i] = N::RealField::zero(); } } self.recompose().map(|m| m.adjoint()) } } /// Solves the system `self * x = b` where `self` is the decomposed matrix and `x` the unknown. /// /// Any singular value smaller than `eps` is assumed to be zero. /// Returns `Err` if the singular vectors `U` and `V` have not been computed. // FIXME: make this more generic wrt the storage types and the dimensions for `b`. pub fn solve( &self, b: &Matrix, eps: N::RealField, ) -> Result, &'static str> where S2: Storage, DefaultAllocator: Allocator + Allocator, C2>, ShapeConstraint: SameNumberOfRows, { if eps < N::RealField::zero() { Err("SVD solve: the epsilon must be non-negative.") } else { match (&self.u, &self.v_t) { (Some(u), Some(v_t)) => { let mut ut_b = u.ad_mul(b); for j in 0..ut_b.ncols() { let mut col = ut_b.column_mut(j); for i in 0..self.singular_values.len() { let val = self.singular_values[i]; if val > eps { col[i] = col[i].unscale(val); } else { col[i] = N::zero(); } } } Ok(v_t.ad_mul(&ut_b)) } (None, None) => Err("SVD solve: U and V^t have not been computed."), (None, _) => Err("SVD solve: U has not been computed."), (_, None) => Err("SVD solve: V^t has not been computed."), } } } } impl, C: Dim, S: Storage> Matrix where DimMinimum: DimSub, // for Bidiagonal. DefaultAllocator: Allocator + Allocator + Allocator + Allocator, U1>> + Allocator, C> + Allocator> + Allocator> + Allocator> + Allocator, U1>>, { /// Computes the singular values of this matrix. pub fn singular_values(&self) -> VectorN> { SVD::new(self.clone_owned(), false, false).singular_values } /// Computes the rank of this matrix. /// /// All singular values below `eps` are considered equal to 0. pub fn rank(&self, eps: N::RealField) -> usize { let svd = SVD::new(self.clone_owned(), false, false); svd.rank(eps) } /// Computes the pseudo-inverse of this matrix. /// /// All singular values below `eps` are considered equal to 0. pub fn pseudo_inverse(self, eps: N::RealField) -> Result, &'static str> where DefaultAllocator: Allocator, { SVD::new(self.clone_owned(), true, true).pseudo_inverse(eps) } } // Explicit formulae inspired from the paper "Computing the Singular Values of 2-by-2 Complex // Matrices", Sanzheng Qiao and Xiaohong Wang. // http://www.cas.mcmaster.ca/sqrl/papers/sqrl5.pdf fn compute_2x2_uptrig_svd( m11: N, m12: N, m22: N, compute_u: bool, compute_v: bool, ) -> ( Option>, Vector2, Option>, ) { let two: N::RealField = crate::convert(2.0f64); let half: N::RealField = crate::convert(0.5f64); let denom = (m11 + m22).hypot(m12) + (m11 - m22).hypot(m12); // NOTE: v1 is the singular value that is the closest to m22. // This prevents cancellation issues when constructing the vector `csv` below. If we chose // otherwise, we would have v1 ~= m11 when m12 is small. This would cause catastrophic // cancellation on `v1 * v1 - m11 * m11` below. let mut v1 = m11 * m22 * two / denom; let mut v2 = half * denom; let mut u = None; let mut v_t = None; if compute_u || compute_v { let (csv, sgn_v) = GivensRotation::new(m11 * m12, v1 * v1 - m11 * m11); v1 *= sgn_v; v2 *= sgn_v; if compute_v { v_t = Some(csv); } if compute_u { let cu = (m11.scale(csv.c()) + m12 * csv.s()) / v1; let su = (m22 * csv.s()) / v1; let (csu, sgn_u) = GivensRotation::new(cu, su); v1 *= sgn_u; v2 *= sgn_u; u = Some(csu); } } (u, Vector2::new(v1, v2), v_t) }