31fc498182
use tempdir to write matrix when running test
2022-05-07 13:40:25 +02:00
8e48d26767
add more tests; use bufwritter; fix typo; use temp_dir to test with files
2022-03-21 12:19:34 +01:00
d511e372de
add support for matrix market export
2022-01-24 23:17:30 +01:00
656180f40e
fix for empty dense matrix
2021-12-13 09:28:28 +01:00
92b324c007
code fmt; fix failing unit test and doc test
2021-12-12 12:10:20 +01:00
4d0f401882
Add (failing) test for empty matrix market matrix
2021-12-01 11:27:03 +01:00
4c039573f2
Make nalgebra-sparse unit tests require io feature
2021-12-01 11:26:51 +01:00
332fe8c0e4
update loading matrix market, including:
...
1. Several renamings
2. removed unnecessary traits
3. added support for dense matrix
4. removed unnecessary comparison when reading data line by line. (e.g.
only read header line once)
2021-11-17 16:41:10 +01:00
7f9128c92d
added reading matrix market data to sparse coomatrix
2021-11-02 10:59:59 +01:00
752d1f300d
Permute values without unnecessary allocation
2021-10-20 01:50:42 +02:00
f90bb8d64a
Fix wrong csr-constructor call
2021-10-18 10:59:51 +02:00
86eeb192db
Add module for unit test data examples
2021-10-17 22:29:59 +02:00
4b41be75b0
Add tests for some csr matrix related failure cases
2021-10-14 23:18:34 +02:00
469765a4e5
Apply permutation
2021-10-08 00:36:40 +02:00
9e85c9e2b6
CSR/CSC: Provide constructor for unsorted but otherwise valid data
2021-10-03 14:59:28 +02:00
e6e7efba8a
COO: add push_matrix fn
...
- This function allows one to add entire dense matrices
to a sparse COO matrix.
- Added a small mention of this new function in the
example in lib.rs
2021-06-08 10:05:50 -04:00
66b9185ec1
Test CsrMatrix::row_iter(_mut) and CscMatrix::col_iter(_mut)
2021-02-01 14:38:11 +01:00
1ebb612d46
Test Csr/CscMatrix::{index_entry, index_entry_mut, get_entry, get_entry_mut}
2021-02-01 09:27:33 +01:00
0936c4fad9
Add tests for Csr/CscMatrix::identity
2021-02-01 08:52:13 +01:00
7473d54d74
rustfmt
2021-01-26 10:11:24 +01:00
7b6333e9d1
Rename some Csr/Csc/SparsityPattern methods
2021-01-26 10:11:24 +01:00
0bee9be6c7
Extend CSC/CSR * Dense to work for combinations of ref and owned
2021-01-26 10:11:24 +01:00
7a083d50f7
Increase tolerance to ensure tests pass
...
It's possible that some particularly bad inputs cause
severe loss of significance in the triangular solves.
This is exacerbated by the fact that the way we test
the (residual) error is also prone to loss of significance,
so that the error measure itself is problematic.
We could maybe improve this in the future by using arbitrary-
precision arithmetic to remove some sources of error and testing
against appropriate bounds.
2021-01-26 10:11:24 +01:00
31c911d4fb
Change proptest strategies to use DimRange
2021-01-26 10:11:24 +01:00
9cd1540496
Improve and test proptest generators
...
Due to a bug in proptest, we were required to pull in and modify
parts of proptest::strategy::Shuffle. Once the below PR has been merged
and released on crates.io, we can remove this code.
https://github.com/AltSysrq/proptest/pull/217
2021-01-26 10:11:24 +01:00
3eab45d81b
Replace spmm_pattern with spmm_{csr/csc}_pattern
2021-01-26 10:11:24 +01:00
e655fed4fa
Replace Arc<SparsityPattern> with SparsityPattern
...
After much deliberation, I have come to the conclusion that the
benefits do not really outweigh the added complexity. Even though
the added complexity is relatively minor, it makes it somewhat
more complicated to inter-op with other sparse linear algebra
libraries in the future.
2021-01-26 10:11:24 +01:00
9b46a43c7f
Add proptest regressions
2021-01-26 10:11:24 +01:00
fc0c22bf78
Add CscCholesky::solve and ::solve_mut
2021-01-26 10:11:24 +01:00
3b1303d1e0
Implement lower/upper triangular solve for CSC matrices
2021-01-26 10:11:24 +01:00
5869f784e5
Implement CsrMatrix/CscMatrix::filter and associated helpers
...
Includes ::lower_triangle(), ::upper_triangle() and
::diagonal_matrix().
2021-01-26 10:11:24 +01:00
3453577a16
Use matrixcompare 0.2 with prop_assert_matrix_eq in Cholesky test
2021-01-26 10:11:24 +01:00
aad2216c56
Initial port from nalgebra::CsCholesky factorization to CscCholesky
2021-01-26 10:11:24 +01:00
885480a634
Implement CSR/CSC * Dense std operations
2021-01-26 10:11:24 +01:00
b7a7f967b8
Implement Neg, Div, DivAssign for Csr/CscMatrix
2021-01-26 10:11:24 +01:00
0b4356eb0e
Implement Sub for Csr/CscMatrix
2021-01-26 10:11:24 +01:00
7aeb663165
Implement matrix-scalar multiplication
2021-01-26 10:11:24 +01:00
dbdf5567fc
Implement arithmetic operations for CSC matrices
2021-01-26 10:11:24 +01:00
66cbd26702
Add prealloc suffix to spmm_csr and spadd_csr
...
The suffix is intended to communicate that these methods
assume `preallocated` storage, i.e. they try to store the
result in a matrix which already has the correct sparsity
pattern for the operation.
2021-01-26 10:11:24 +01:00
4af3fcbdd3
Reorder parameters in ops to intuitive order
2021-01-26 10:11:24 +01:00
fe8592fde1
Refactor ops to use new Op type instead of separate Transpose flag
2021-01-26 10:11:24 +01:00
c6a8fcdee2
Simplify spadd_pattern API and name
2021-01-26 10:11:24 +01:00
6a100c085a
Add proptest regressions
2021-01-26 10:11:24 +01:00
b25848838b
Implement CSR-CSR matrix multiplication
2021-01-26 10:11:24 +01:00
d9cfe5cb3e
Improve dimension assertions for spadd_csr
2021-01-26 10:11:24 +01:00
2d534a6133
Implement spmm_csr
2021-01-26 10:11:24 +01:00
9db17f00e7
Implement spmm_pattern
2021-01-26 10:11:24 +01:00
c4285d9fb3
remove spmv_coo
2021-01-26 10:11:24 +01:00
41941e62c8
Implement CSR-CSR addition
2021-01-26 10:11:24 +01:00
830df6d07b
Implement Csr/CscMatrix::transpose()
2021-01-26 10:11:24 +01:00
Hantao Hui
Andreas Longva
Anton
Paul Jakob Schroeder