add spmm example and change the kernel
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@ -24,6 +24,7 @@ io = [ "pest", "pest_derive" ]
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slow-tests = []
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[dependencies]
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criterion = { version = "0.3", features = ["html_reports"] }
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nalgebra = { version="0.30", path = "../" }
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num-traits = { version = "0.2", default-features = false }
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proptest = { version = "1.0", optional = true }
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@ -31,6 +32,7 @@ matrixcompare-core = { version = "0.1.0", optional = true }
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pest = { version = "2", optional = true }
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pest_derive = { version = "2", optional = true }
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serde = { version = "1.0", default-features = false, features = [ "derive" ], optional = true }
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itertools = "0.10"
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[dev-dependencies]
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itertools = "0.10"
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@ -38,6 +40,11 @@ matrixcompare = { version = "0.3.0", features = [ "proptest-support" ] }
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nalgebra = { version="0.30", path = "../", features = ["compare"] }
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serde_json = "1.0"
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[[example]]
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name = "spmm"
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required-features = ["io"]
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path = "example/spmm.rs"
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[package.metadata.docs.rs]
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# Enable certain features when building docs for docs.rs
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features = [ "proptest-support", "compare" ]
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@ -1,16 +1,19 @@
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use std::collections::HashSet;
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use crate::cs::CsMatrix;
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use crate::ops::serial::{OperationError, OperationErrorKind};
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use crate::ops::Op;
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use crate::SparseEntryMut;
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use itertools::Itertools;
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use nalgebra::{ClosedAdd, ClosedMul, DMatrixSlice, DMatrixSliceMut, Scalar};
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use num_traits::{One, Zero};
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fn spmm_cs_unexpected_entry() -> OperationError {
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OperationError::from_kind_and_message(
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OperationErrorKind::InvalidPattern,
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String::from("Found unexpected entry that is not present in `c`."),
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)
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}
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//fn spmm_cs_unexpected_entry() -> OperationError {
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// OperationError::from_kind_and_message(
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// OperationErrorKind::InvalidPattern,
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// String::from("Found unexpected entry that is not present in `c`."),
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// )
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//}
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/// Helper functionality for implementing CSR/CSC SPMM.
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///
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@ -32,28 +35,54 @@ where
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{
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for i in 0..c.pattern().major_dim() {
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let a_lane_i = a.get_lane(i).unwrap();
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let some_val = Zero::zero();
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let mut scratchpad_values: Vec<T> = vec![some_val; b.pattern().minor_dim()];
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let mut scratchpad_indices: HashSet<usize> = HashSet::new();
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let mut c_lane_i = c.get_lane_mut(i).unwrap();
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for c_ij in c_lane_i.values_mut() {
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*c_ij = beta.clone() * c_ij.clone();
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}
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//let (indices, values) = c_lane_i.indices_and_values_mut();
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//indices
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// .iter()
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// .zip(values.iter())
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// .for_each(|(id, val)| scratchpad_values[*id] = beta.clone() * val.clone());
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//for (index, c_ij) in c_lane_i.indices_and_values_mut() {
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// *c_ij = beta.clone() * c_ij.clone();
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//}
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for (&k, a_ik) in a_lane_i.minor_indices().iter().zip(a_lane_i.values()) {
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let b_lane_k = b.get_lane(k).unwrap();
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let (mut c_lane_i_cols, mut c_lane_i_values) = c_lane_i.indices_and_values_mut();
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//let (mut c_lane_i_cols, mut c_lane_i_values) = c_lane_i.indices_and_values_mut();
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let alpha_aik = alpha.clone() * a_ik.clone();
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for (j, b_kj) in b_lane_k.minor_indices().iter().zip(b_lane_k.values()) {
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// Determine the location in C to append the value
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let (c_local_idx, _) = c_lane_i_cols
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.iter()
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.enumerate()
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.find(|(_, c_col)| *c_col == j)
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.ok_or_else(spmm_cs_unexpected_entry)?;
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// TODO make a scratchpad and defer the accumulation into C after processing one
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// full row of A.
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scratchpad_values[*j] += alpha_aik.clone() * b_kj.clone();
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scratchpad_indices.insert(*j);
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//let (c_local_idx, _) = c_lane_i_cols
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// .iter()
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// .enumerate()
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// .find(|(_, c_col)| *c_col == j)
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// .ok_or_else(spmm_cs_unexpected_entry)?;
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c_lane_i_values[c_local_idx] += alpha_aik.clone() * b_kj.clone();
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c_lane_i_cols = &c_lane_i_cols[c_local_idx..];
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c_lane_i_values = &mut c_lane_i_values[c_local_idx..];
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//c_lane_i_values[c_local_idx] += alpha_aik.clone() * b_kj.clone();
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//c_lane_i_cols = &c_lane_i_cols[c_local_idx..];
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//c_lane_i_values = &mut c_lane_i_values[c_local_idx..];
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}
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}
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// sort the indices, and then access the relevant indices (in sorted order) from values
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// into C.
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let sorted_indices: Vec<usize> =
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Itertools::sorted(scratchpad_indices.into_iter()).collect();
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c_lane_i
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.values_mut()
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.iter_mut()
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.zip(sorted_indices.into_iter())
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.for_each(|(output_ref, index)| {
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*output_ref = beta.clone() * output_ref.clone() + scratchpad_values[index].clone()
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});
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}
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Ok(())
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