core/ndstrides: implement np_transpose() (no axes argument)
The IRRT implementation knows how to handle axes. But the argument is not in NAC3 yet.
This commit is contained in:
parent
fc51bc63e2
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020b776889
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@ -12,3 +12,4 @@
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#include "irrt/ndarray/array.hpp"
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#include "irrt/ndarray/reshape.hpp"
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#include "irrt/ndarray/broadcast.hpp"
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#include "irrt/ndarray/transpose.hpp"
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@ -0,0 +1,145 @@
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#pragma once
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#include "irrt/debug.hpp"
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#include "irrt/exception.hpp"
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#include "irrt/int_types.hpp"
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#include "irrt/ndarray/def.hpp"
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#include "irrt/slice.hpp"
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/*
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* Notes on `np.transpose(<array>, <axes>)`
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*
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* TODO: `axes`, if specified, can actually contain negative indices,
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* but it is not documented in numpy.
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*
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* Supporting it for now.
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*/
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namespace {
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namespace ndarray {
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namespace transpose {
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/**
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* @brief Do assertions on `<axes>` in `np.transpose(<array>, <axes>)`.
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*
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* Note that `np.transpose`'s `<axe>` argument is optional. If the argument
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* is specified but the user, use this function to do assertions on it.
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*
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* @param ndims The number of dimensions of `<array>`
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* @param num_axes Number of elements in `<axes>` as specified by the user.
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* This should be equal to `ndims`. If not, a "ValueError: axes don't match array" is thrown.
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* @param axes The user specified `<axes>`.
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*/
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template<typename SizeT>
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void assert_transpose_axes(SizeT ndims, SizeT num_axes, const SizeT* axes) {
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if (ndims != num_axes) {
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raise_exception(SizeT, EXN_VALUE_ERROR, "axes don't match array", NO_PARAM, NO_PARAM, NO_PARAM);
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}
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// TODO: Optimize this
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bool* axe_specified = (bool*)__builtin_alloca(sizeof(bool) * ndims);
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for (SizeT i = 0; i < ndims; i++)
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axe_specified[i] = false;
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for (SizeT i = 0; i < ndims; i++) {
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SizeT axis = slice::resolve_index_in_length(ndims, axes[i]);
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if (axis == -1) {
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// TODO: numpy actually throws a `numpy.exceptions.AxisError`
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raise_exception(SizeT, EXN_VALUE_ERROR, "axis {0} is out of bounds for array of dimension {1}", axis, ndims,
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NO_PARAM);
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}
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if (axe_specified[axis]) {
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raise_exception(SizeT, EXN_VALUE_ERROR, "repeated axis in transpose", NO_PARAM, NO_PARAM, NO_PARAM);
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}
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axe_specified[axis] = true;
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}
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}
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/**
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* @brief Create a transpose view of `src_ndarray` and perform proper assertions.
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*
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* This function is very similar to doing `dst_ndarray = np.transpose(src_ndarray, <axes>)`.
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* If `<axes>` is supposed to be `None`, caller can pass in a `nullptr` to `<axes>`.
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*
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* The transpose view created is returned by modifying `dst_ndarray`.
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*
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* The caller is responsible for setting up `dst_ndarray` before calling this function.
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* Here is what this function expects from `dst_ndarray` when called:
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* - `dst_ndarray->data` does not have to be initialized.
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* - `dst_ndarray->itemsize` does not have to be initialized.
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* - `dst_ndarray->ndims` must be initialized, must be equal to `src_ndarray->ndims`.
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* - `dst_ndarray->shape` must be allocated, through it can contain uninitialized values.
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* - `dst_ndarray->strides` must be allocated, through it can contain uninitialized values.
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* When this function call ends:
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* - `dst_ndarray->data` is set to `src_ndarray->data` (`dst_ndarray` is just a view to `src_ndarray`)
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* - `dst_ndarray->itemsize` is set to `src_ndarray->itemsize`
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* - `dst_ndarray->ndims` is unchanged
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* - `dst_ndarray->shape` is updated according to how `np.transpose` works
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* - `dst_ndarray->strides` is updated according to how `np.transpose` works
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*
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* @param src_ndarray The NDArray to build a transpose view on
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* @param dst_ndarray The resulting NDArray after transpose. Further details in the comments above,
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* @param num_axes Number of elements in axes. Unused if `axes` is nullptr.
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* @param axes Axes permutation. Set it to `nullptr` if `<axes>` is `None`.
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*/
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template<typename SizeT>
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void transpose(const NDArray<SizeT>* src_ndarray, NDArray<SizeT>* dst_ndarray, SizeT num_axes, const SizeT* axes) {
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debug_assert_eq(SizeT, src_ndarray->ndims, dst_ndarray->ndims);
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const auto ndims = src_ndarray->ndims;
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if (axes != nullptr)
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assert_transpose_axes(ndims, num_axes, axes);
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dst_ndarray->data = src_ndarray->data;
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dst_ndarray->itemsize = src_ndarray->itemsize;
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// Check out https://ajcr.net/stride-guide-part-2/ to see how `np.transpose` works behind the scenes.
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if (axes == nullptr) {
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// `np.transpose(<array>, axes=None)`
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/*
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* Minor note: `np.transpose(<array>, axes=None)` is equivalent to
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* `np.transpose(<array>, axes=[N-1, N-2, ..., 0])` - basically it
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* is reversing the order of strides and shape.
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*
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* This is a fast implementation to handle this special (but very common) case.
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*/
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for (SizeT axis = 0; axis < ndims; axis++) {
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dst_ndarray->shape[axis] = src_ndarray->shape[ndims - axis - 1];
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dst_ndarray->strides[axis] = src_ndarray->strides[ndims - axis - 1];
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}
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} else {
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// `np.transpose(<array>, <axes>)`
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// Permute strides and shape according to `axes`, while resolving negative indices in `axes`
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for (SizeT axis = 0; axis < ndims; axis++) {
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// `i` cannot be OUT_OF_BOUNDS because of assertions
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SizeT i = slice::resolve_index_in_length(ndims, axes[axis]);
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dst_ndarray->shape[axis] = src_ndarray->shape[i];
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dst_ndarray->strides[axis] = src_ndarray->strides[i];
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}
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}
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}
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} // namespace transpose
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} // namespace ndarray
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} // namespace
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extern "C" {
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using namespace ndarray::transpose;
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void __nac3_ndarray_transpose(const NDArray<int32_t>* src_ndarray,
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NDArray<int32_t>* dst_ndarray,
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int32_t num_axes,
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const int32_t* axes) {
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transpose(src_ndarray, dst_ndarray, num_axes, axes);
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}
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void __nac3_ndarray_transpose64(const NDArray<int64_t>* src_ndarray,
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NDArray<int64_t>* dst_ndarray,
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int64_t num_axes,
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const int64_t* axes) {
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transpose(src_ndarray, dst_ndarray, num_axes, axes);
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}
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}
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@ -1204,3 +1204,20 @@ pub fn call_nac3_ndarray_broadcast_shapes<'ctx, G: CodeGenerator + ?Sized>(
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.arg(dst_shape)
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.returning_void();
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}
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pub fn call_nac3_ndarray_transpose<'ctx, G: CodeGenerator + ?Sized>(
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generator: &mut G,
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ctx: &mut CodeGenContext<'ctx, '_>,
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src_ndarray: Instance<'ctx, Ptr<Struct<NDArray>>>,
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dst_ndarray: Instance<'ctx, Ptr<Struct<NDArray>>>,
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num_axes: Instance<'ctx, Int<SizeT>>,
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axes: Instance<'ctx, Ptr<Int<SizeT>>>,
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) {
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let name = get_sizet_dependent_function_name(generator, ctx, "__nac3_ndarray_transpose");
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FnCall::builder(generator, ctx, &name)
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.arg(src_ndarray)
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.arg(dst_ndarray)
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.arg(num_axes)
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.arg(axes)
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.returning_void();
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}
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@ -1991,113 +1991,6 @@ pub fn gen_ndarray_fill<'ctx>(
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Ok(())
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}
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/// Generates LLVM IR for `ndarray.transpose`.
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pub fn ndarray_transpose<'ctx, G: CodeGenerator + ?Sized>(
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generator: &mut G,
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ctx: &mut CodeGenContext<'ctx, '_>,
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x1: (Type, BasicValueEnum<'ctx>),
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) -> Result<BasicValueEnum<'ctx>, String> {
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const FN_NAME: &str = "ndarray_transpose";
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let (x1_ty, x1) = x1;
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let llvm_usize = generator.get_size_type(ctx.ctx);
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if let BasicValueEnum::PointerValue(n1) = x1 {
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let (elem_ty, _) = unpack_ndarray_var_tys(&mut ctx.unifier, x1_ty);
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let n1 = NDArrayValue::from_ptr_val(n1, llvm_usize, None);
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let n_sz = call_ndarray_calc_size(generator, ctx, &n1.dim_sizes(), (None, None));
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// Dimensions are reversed in the transposed array
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let out = create_ndarray_dyn_shape(
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generator,
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ctx,
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elem_ty,
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&n1,
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|_, ctx, n| Ok(n.load_ndims(ctx)),
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|generator, ctx, n, idx| {
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let new_idx = ctx.builder.build_int_sub(n.load_ndims(ctx), idx, "").unwrap();
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let new_idx = ctx
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.builder
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.build_int_sub(new_idx, new_idx.get_type().const_int(1, false), "")
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.unwrap();
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unsafe { Ok(n.dim_sizes().get_typed_unchecked(ctx, generator, &new_idx, None)) }
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},
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)
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.unwrap();
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gen_for_callback_incrementing(
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generator,
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ctx,
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None,
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llvm_usize.const_zero(),
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(n_sz, false),
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|generator, ctx, _, idx| {
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let elem = unsafe { n1.data().get_unchecked(ctx, generator, &idx, None) };
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let new_idx = generator.gen_var_alloc(ctx, llvm_usize.into(), None)?;
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let rem_idx = generator.gen_var_alloc(ctx, llvm_usize.into(), None)?;
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ctx.builder.build_store(new_idx, llvm_usize.const_zero()).unwrap();
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ctx.builder.build_store(rem_idx, idx).unwrap();
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// Incrementally calculate the new index in the transposed array
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// For each index, we first decompose it into the n-dims and use those to reconstruct the new index
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// The formula used for indexing is:
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// idx = dim_n * ( ... (dim2 * (dim0 * dim1) + dim1) + dim2 ... ) + dim_n
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gen_for_callback_incrementing(
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generator,
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ctx,
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None,
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llvm_usize.const_zero(),
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(n1.load_ndims(ctx), false),
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|generator, ctx, _, ndim| {
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let ndim_rev =
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ctx.builder.build_int_sub(n1.load_ndims(ctx), ndim, "").unwrap();
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let ndim_rev = ctx
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.builder
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.build_int_sub(ndim_rev, llvm_usize.const_int(1, false), "")
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.unwrap();
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let dim = unsafe {
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n1.dim_sizes().get_typed_unchecked(ctx, generator, &ndim_rev, None)
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};
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let rem_idx_val =
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ctx.builder.build_load(rem_idx, "").unwrap().into_int_value();
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let new_idx_val =
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ctx.builder.build_load(new_idx, "").unwrap().into_int_value();
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let add_component =
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ctx.builder.build_int_unsigned_rem(rem_idx_val, dim, "").unwrap();
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let rem_idx_val =
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ctx.builder.build_int_unsigned_div(rem_idx_val, dim, "").unwrap();
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let new_idx_val = ctx.builder.build_int_mul(new_idx_val, dim, "").unwrap();
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let new_idx_val =
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ctx.builder.build_int_add(new_idx_val, add_component, "").unwrap();
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ctx.builder.build_store(rem_idx, rem_idx_val).unwrap();
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ctx.builder.build_store(new_idx, new_idx_val).unwrap();
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Ok(())
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},
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llvm_usize.const_int(1, false),
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)?;
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let new_idx_val = ctx.builder.build_load(new_idx, "").unwrap().into_int_value();
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unsafe { out.data().set_unchecked(ctx, generator, &new_idx_val, elem) };
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Ok(())
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},
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llvm_usize.const_int(1, false),
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)?;
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Ok(out.as_base_value().into())
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} else {
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codegen_unreachable!(
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ctx,
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"{FN_NAME}() not supported for '{}'",
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format!("'{}'", ctx.unifier.stringify(x1_ty))
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)
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}
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}
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/// Generates LLVM IR for `ndarray.dot`.
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/// Calculate inner product of two vectors or literals
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/// For matrix multiplication use `np_matmul`
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@ -1,7 +1,8 @@
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use super::{indexing::RustNDIndex, NDArrayObject};
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use crate::codegen::{
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irrt::call_nac3_ndarray_reshape_resolve_and_check_new_shape, model::*, CodeGenContext,
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CodeGenerator,
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irrt::{call_nac3_ndarray_reshape_resolve_and_check_new_shape, call_nac3_ndarray_transpose},
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model::*,
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CodeGenContext, CodeGenerator,
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};
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impl<'ctx> NDArrayObject<'ctx> {
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@ -85,4 +86,33 @@ impl<'ctx> NDArrayObject<'ctx> {
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dst_ndarray
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}
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/// Create a transposed view on this ndarray like `np.transpose(<ndarray>, <axes> = None)`.
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/// * `axes` - If specified, should be an array of the permutation (negative indices are **allowed**).
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#[must_use]
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pub fn transpose<G: CodeGenerator + ?Sized>(
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&self,
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generator: &mut G,
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ctx: &mut CodeGenContext<'ctx, '_>,
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axes: Option<Instance<'ctx, Ptr<Int<SizeT>>>>,
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) -> Self {
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// Define models
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let transposed_ndarray = NDArrayObject::alloca(generator, ctx, self.dtype, self.ndims);
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let num_axes = self.ndims_llvm(generator, ctx.ctx);
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// `axes = nullptr` if `axes` is unspecified.
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let axes = axes.unwrap_or_else(|| Ptr(Int(SizeT)).nullptr(generator, ctx.ctx));
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call_nac3_ndarray_transpose(
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generator,
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ctx,
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self.instance,
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transposed_ndarray.instance,
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num_axes,
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axes,
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);
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transposed_ndarray
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}
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}
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@ -1482,18 +1482,26 @@ impl<'a> BuiltinBuilder<'a> {
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);
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match prim {
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PrimDef::FunNpTranspose => create_fn_by_codegen(
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self.unifier,
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&into_var_map([in_ndarray_ty]),
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prim.name(),
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in_ndarray_ty.ty,
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&[(in_ndarray_ty.ty, "x")],
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Box::new(move |ctx, _, fun, args, generator| {
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let arg_ty = fun.0.args[0].ty;
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let arg_val = args[0].1.clone().to_basic_value_enum(ctx, generator, arg_ty)?;
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Ok(Some(ndarray_transpose(generator, ctx, (arg_ty, arg_val))?))
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}),
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),
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PrimDef::FunNpTranspose => {
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create_fn_by_codegen(
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self.unifier,
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&into_var_map([in_ndarray_ty]),
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prim.name(),
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in_ndarray_ty.ty,
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&[(in_ndarray_ty.ty, "x")],
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Box::new(move |ctx, _, fun, args, generator| {
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let arg_ty = fun.0.args[0].ty;
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let arg_val =
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args[0].1.clone().to_basic_value_enum(ctx, generator, arg_ty)?;
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let arg = AnyObject { ty: arg_ty, value: arg_val };
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let ndarray = NDArrayObject::from_object(generator, ctx, arg);
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let ndarray = ndarray.transpose(generator, ctx, None); // TODO: Add axes argument
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Ok(Some(ndarray.instance.value.as_basic_value_enum()))
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}),
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)
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}
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// NOTE: on `ndarray_factory_fn_shape_arg_tvar` and
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// the `param_ty` for `create_fn_by_codegen`.
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